RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 NFAT5O94916 1531 aa27.46■■□□□ 1.99
RNF39-202ENST00000376751 C14orf37Q86TY3 774 aa27.46■■□□□ 1.99
RNF39-202ENST00000376751 NBR1Q14596 966 aa27.44■■□□□ 1.98
RNF39-202ENST00000376751 API5Q9BZZ5 524 aaKnown RBP27.44■■□□□ 1.98
RNF39-202ENST00000376751 C1orf115Q9H7X2 142 aa27.44■■□□□ 1.98
RNF39-202ENST00000376751 RGS12O14924 1447 aa27.44■■□□□ 1.98
RNF39-202ENST00000376751 MIS18AQ9NYP9 233 aa27.43■■□□□ 1.98
RNF39-202ENST00000376751 RTL1A6NKG5 1358 aa27.42■■□□□ 1.98
RNF39-202ENST00000376751 ESCO1Q5FWF5 840 aa27.42■■□□□ 1.98
RNF39-202ENST00000376751 GAS2L2Q8NHY3 880 aa27.42■■□□□ 1.98
RNF39-202ENST00000376751 SLC4A3P48751 1232 aa27.41■■□□□ 1.98
RNF39-202ENST00000376751 LTV1Q96GA3 475 aaPredicted RBP27.41■■□□□ 1.98
RNF39-202ENST00000376751 RTF1Q92541 710 aaKnown RBP27.4■■□□□ 1.98
RNF39-202ENST00000376751 NUCB1Q02818 461 aa27.39■■□□□ 1.98
RNF39-202ENST00000376751 CHMP4BQ9H444 224 aaKnown RBP27.38■■□□□ 1.97
RNF39-202ENST00000376751 SIRT2Q8IXJ6 389 aa27.37■■□□□ 1.97
RNF39-202ENST00000376751 TSPYL4Q9UJ04 414 aa27.37■■□□□ 1.97
RNF39-202ENST00000376751 PSME1Q06323 249 aa27.37■■□□□ 1.97
RNF39-202ENST00000376751 MSH6P52701 1360 aa27.36■■□□□ 1.97
RNF39-202ENST00000376751 HAP1P54257 671 aaPredicted RBP27.35■■□□□ 1.97
RNF39-202ENST00000376751 USHBP1Q8N6Y0 703 aa27.35■■□□□ 1.97
RNF39-202ENST00000376751 ORAI2Q96SN7 254 aa27.35■■□□□ 1.97
RNF39-202ENST00000376751 INTS3Q68E01 1043 aaKnown RBP27.34■■□□□ 1.97
RNF39-202ENST00000376751 IP6K1Q92551 441 aa27.34■■□□□ 1.97
RNF39-202ENST00000376751 PHRF1Q9P1Y6 1649 aaKnown RBP27.34■■□□□ 1.97
RNF39-202ENST00000376751 HTATSF1O43719 755 aaKnown RBP27.33■■□□□ 1.97
RNF39-202ENST00000376751 LNPKQ9C0E8 428 aa27.33■■□□□ 1.97
RNF39-202ENST00000376751 RGPD2P0DJD1 1756 aa27.33■■□□□ 1.97
RNF39-202ENST00000376751 MAP3K5Q99683 1374 aa27.33■■□□□ 1.97
RNF39-202ENST00000376751 GNAT3A8MTJ3 354 aa27.32■■□□□ 1.96
RNF39-202ENST00000376751 CHD1LQ86WJ1 897 aa27.32■■□□□ 1.96
RNF39-202ENST00000376751 TRPM3Q9HCF6 1732 aaPredicted RBP27.31■■□□□ 1.96
RNF39-202ENST00000376751 XPCQ01831 940 aaPredicted RBP27.31■■□□□ 1.96
RNF39-202ENST00000376751 FAM208AQ9UK61 1670 aaKnown RBP27.3■■□□□ 1.96
RNF39-202ENST00000376751 PTPRCP08575 1304 aa27.3■■□□□ 1.96
RNF39-202ENST00000376751 SLIT3O75094 1523 aa27.29■■□□□ 1.96
RNF39-202ENST00000376751 IL17REQ8NFR9 667 aa27.29■■□□□ 1.96
RNF39-202ENST00000376751 GCC1Q96CN9 775 aa27.29■■□□□ 1.96
RNF39-202ENST00000376751 SLC4A2P04920 1241 aa27.28■■□□□ 1.96
RNF39-202ENST00000376751 TBC1D32Q96NH3 1257 aa27.28■■□□□ 1.96
RNF39-202ENST00000376751 ATP10DQ9P241 1426 aa27.27■■□□□ 1.96
RNF39-202ENST00000376751 NBPF6Q5VWK0 638 aa27.27■■□□□ 1.96
RNF39-202ENST00000376751 G2E3Q7L622 706 aa27.27■■□□□ 1.96
RNF39-202ENST00000376751 NBPF4Q96M43 638 aa27.27■■□□□ 1.96
RNF39-202ENST00000376751 ZBTB7CA1YPR0 619 aa27.26■■□□□ 1.95
RNF39-202ENST00000376751 KCNH5Q8NCM2 988 aa27.26■■□□□ 1.95
RNF39-202ENST00000376751 DAXXQ9UER7 740 aaPredicted RBP27.26■■□□□ 1.95
RNF39-202ENST00000376751 ANKRD45Q5TZF3 282 aa27.26■■□□□ 1.95
RNF39-202ENST00000376751 PROSER2Q86WR7 435 aaPredicted RBP27.26■■□□□ 1.95
RNF39-202ENST00000376751 C1orf167Q5SNV9 1468 aa27.23■■□□□ 1.95
RNF39-202ENST00000376751 UPF2Q9HAU5 1272 aaKnown RBP27.23■■□□□ 1.95
RNF39-202ENST00000376751 KIF1AQ12756 1690 aa27.23■■□□□ 1.95
RNF39-202ENST00000376751 MED1Q15648 1581 aaPredicted RBP27.21■■□□□ 1.95
RNF39-202ENST00000376751 LRRC59Q96AG4 307 aaKnown RBP27.21■■□□□ 1.95
RNF39-202ENST00000376751 STRCP1A6NGW2 1772 aa27.21■■□□□ 1.95
RNF39-202ENST00000376751 PLEKHG5O94827 1062 aa27.2■■□□□ 1.95
RNF39-202ENST00000376751 GCP02774 474 aa27.2■■□□□ 1.95
RNF39-202ENST00000376751 MEIS3Q99687 375 aa27.2■■□□□ 1.95
RNF39-202ENST00000376751 ARHGEF25Q86VW2 580 aa27.2■■□□□ 1.94
RNF39-202ENST00000376751 ANKRD44Q8N8A2 993 aa27.19■■□□□ 1.94
RNF39-202ENST00000376751 F6X3S4 739 aa27.18■■□□□ 1.94
RNF39-202ENST00000376751 TAF7Q15545 349 aaPredicted RBP27.18■■□□□ 1.94
RNF39-202ENST00000376751 LMO7Q8WWI1 1683 aa27.18■■□□□ 1.94
RNF39-202ENST00000376751 CEMIPQ8WUJ3 1361 aa27.18■■□□□ 1.94
RNF39-202ENST00000376751 CACNA1FO60840 1977 aa27.18■■□□□ 1.94
RNF39-202ENST00000376751 MFAP1P55081 439 aaKnown RBP27.17■■□□□ 1.94
RNF39-202ENST00000376751 CEP85Q6P2H3 762 aa27.17■■□□□ 1.94
RNF39-202ENST00000376751 RTL5Q5HYW3 569 aaPredicted RBP27.17■■□□□ 1.94
RNF39-202ENST00000376751 LMOD2Q6P5Q4 547 aa27.17■■□□□ 1.94
RNF39-202ENST00000376751 KRT28Q7Z3Y7 464 aa27.17■■□□□ 1.94
RNF39-202ENST00000376751 DCTPP1Q9H773 170 aa27.17■■□□□ 1.94
RNF39-202ENST00000376751 NCAPD2Q15021 1401 aa27.17■■□□□ 1.94
RNF39-202ENST00000376751 ALS2Q96Q42 1657 aa27.16■■□□□ 1.94
RNF39-202ENST00000376751 BABAM1Q9NWV8 329 aa27.16■■□□□ 1.94
RNF39-202ENST00000376751 CAMTA1Q9Y6Y1 1673 aa27.16■■□□□ 1.94
RNF39-202ENST00000376751 BMP2KLQ5H9B9 411 aa27.15■■□□□ 1.94
RNF39-202ENST00000376751 STK31Q9BXU1 1019 aa27.15■■□□□ 1.94
RNF39-202ENST00000376751 C19orf44Q9H6X5 657 aa27.15■■□□□ 1.94
RNF39-202ENST00000376751 KDM3BQ7LBC6 1761 aa27.15■■□□□ 1.94
RNF39-202ENST00000376751 NECTIN2Q92692 538 aa27.15■■□□□ 1.94
RNF39-202ENST00000376751 RGPD5Q99666 1765 aa27.14■■□□□ 1.93
RNF39-202ENST00000376751 CCDC30Q5VVM6 783 aa27.13■■□□□ 1.93
RNF39-202ENST00000376751 SLC4A10Q6U841 1118 aa27.13■■□□□ 1.93
RNF39-202ENST00000376751 LGR6Q9HBX8 967 aa27.13■■□□□ 1.93
RNF39-202ENST00000376751 PXDNQ92626 1479 aa27.13■■□□□ 1.93
RNF39-202ENST00000376751 N4BP2Q86UW6 1770 aaPredicted RBP27.13■■□□□ 1.93
RNF39-202ENST00000376751 RPAP2Q8IXW5 612 aaPredicted RBP27.13■■□□□ 1.93
RNF39-202ENST00000376751 C22orf23Q9BZE7 217 aa27.13■■□□□ 1.93
RNF39-202ENST00000376751 MST1RQ04912 1400 aa27.12■■□□□ 1.93
RNF39-202ENST00000376751 FLIIQ13045 1269 aa27.12■■□□□ 1.93
RNF39-202ENST00000376751 CCT4P50991 539 aaKnown RBP27.11■■□□□ 1.93
RNF39-202ENST00000376751 SOS1Q07889 1333 aaPredicted RBP27.11■■□□□ 1.93
RNF39-202ENST00000376751 ANKRD24Q8TF21 1146 aa27.11■■□□□ 1.93
RNF39-202ENST00000376751 TMEM94Q12767 1356 aa27.11■■□□□ 1.93
RNF39-202ENST00000376751 BECN1Q14457 450 aa27.1■■□□□ 1.93
RNF39-202ENST00000376751 ZNF530Q6P9A1 599 aaPredicted RBP27.09■■□□□ 1.93
RNF39-202ENST00000376751 AXIN2Q9Y2T1 843 aa27.09■■□□□ 1.93
RNF39-202ENST00000376751 FKBP5Q13451 457 aaPredicted RBP27.08■■□□□ 1.92
RNF39-202ENST00000376751 PLEKHM2Q8IWE5 1019 aa27.08■■□□□ 1.92
RNF39-202ENST00000376751 TBC1D2Q9BYX2 928 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms