RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CLTCQ00610 1675 aaKnown RBP20.24■□□□□ 0.83
TRIM39-201ENST00000376656 YTHDC2Q9H6S0 1430 aaKnown RBP20.24■□□□□ 0.83
TRIM39-201ENST00000376656 YEATS2Q9ULM3 1422 aa20.24■□□□□ 0.83
TRIM39-201ENST00000376656 FAM83GA6ND36 823 aa20.24■□□□□ 0.83
TRIM39-201ENST00000376656 ANKRD44Q8N8A2 993 aa20.24■□□□□ 0.83
TRIM39-201ENST00000376656 ATP10DQ9P241 1426 aa20.23■□□□□ 0.83
TRIM39-201ENST00000376656 RNF214Q8ND24 703 aa20.23■□□□□ 0.83
TRIM39-201ENST00000376656 EMILIN1Q9Y6C2 1016 aa20.23■□□□□ 0.83
TRIM39-201ENST00000376656 CASC1Q6TDU7 716 aa20.22■□□□□ 0.83
TRIM39-201ENST00000376656 ASXL2Q76L83 1435 aa20.22■□□□□ 0.83
TRIM39-201ENST00000376656 MAP2P11137 1827 aaKnown RBP20.22■□□□□ 0.83
TRIM39-201ENST00000376656 DCTN1Q14203 1278 aa20.22■□□□□ 0.83
TRIM39-201ENST00000376656 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
TRIM39-201ENST00000376656 MAP7D2Q96T17 732 aa20.21■□□□□ 0.83
TRIM39-201ENST00000376656 CEP85Q6P2H3 762 aa20.2■□□□□ 0.82
TRIM39-201ENST00000376656 CCDC39Q9UFE4 941 aa20.2■□□□□ 0.82
TRIM39-201ENST00000376656 DLG5Q8TDM6 1919 aa20.2■□□□□ 0.82
TRIM39-201ENST00000376656 IL13P35225 146 aa20.2■□□□□ 0.82
TRIM39-201ENST00000376656 CSPP1Q1MSJ5 1256 aa20.2■□□□□ 0.82
TRIM39-201ENST00000376656 MCM5P33992 734 aa20.2■□□□□ 0.82
TRIM39-201ENST00000376656 REC8O95072 547 aa20.19■□□□□ 0.82
TRIM39-201ENST00000376656 ARID3AQ99856 593 aa20.19■□□□□ 0.82
TRIM39-201ENST00000376656 POGZQ7Z3K3 1410 aa20.18■□□□□ 0.82
TRIM39-201ENST00000376656 RIMS2Q9UQ26 1411 aa20.18■□□□□ 0.82
TRIM39-201ENST00000376656 MYO5BQ9ULV0 1848 aa20.18■□□□□ 0.82
TRIM39-201ENST00000376656 ERC2O15083 957 aa20.18■□□□□ 0.82
TRIM39-201ENST00000376656 RPAP2Q8IXW5 612 aaPredicted RBP20.18■□□□□ 0.82
TRIM39-201ENST00000376656 KRT24Q2M2I5 525 aa20.17■□□□□ 0.82
TRIM39-201ENST00000376656 TMX3Q96JJ7 454 aa20.17■□□□□ 0.82
TRIM39-201ENST00000376656 MLH3Q9UHC1 1453 aa20.17■□□□□ 0.82
TRIM39-201ENST00000376656 ARHGEF40Q8TER5 1519 aa20.17■□□□□ 0.82
TRIM39-201ENST00000376656 DYNC1I1O14576 645 aa20.17■□□□□ 0.82
TRIM39-201ENST00000376656 NEK4P51957 841 aa20.17■□□□□ 0.82
TRIM39-201ENST00000376656 RGS12O14924 1447 aa20.16■□□□□ 0.82
TRIM39-201ENST00000376656 MBD3O95983 291 aa20.16■□□□□ 0.82
TRIM39-201ENST00000376656 SASS6Q6UVJ0 657 aa20.16■□□□□ 0.82
TRIM39-201ENST00000376656 MSH6P52701 1360 aa20.16■□□□□ 0.82
TRIM39-201ENST00000376656 PRDM4Q9UKN5 801 aa20.15■□□□□ 0.82
TRIM39-201ENST00000376656 RTL1A6NKG5 1358 aa20.15■□□□□ 0.82
TRIM39-201ENST00000376656 LMOD3Q0VAK6 560 aa20.15■□□□□ 0.82
TRIM39-201ENST00000376656 MEIS3Q99687 375 aa20.15■□□□□ 0.82
TRIM39-201ENST00000376656 ZRANB1Q9UGI0 708 aa20.14■□□□□ 0.82
TRIM39-201ENST00000376656 BRD1O95696 1058 aa20.14■□□□□ 0.81
TRIM39-201ENST00000376656 ZBTB7CA1YPR0 619 aa20.13■□□□□ 0.81
TRIM39-201ENST00000376656 PTMAP06454 111 aaKnown RBP20.13■□□□□ 0.81
TRIM39-201ENST00000376656 TSPY26PQ9H489 355 aa20.13■□□□□ 0.81
TRIM39-201ENST00000376656 NOL8Q76FK4 1167 aaKnown RBP20.12■□□□□ 0.81
TRIM39-201ENST00000376656 NME9Q86XW9 330 aa20.12■□□□□ 0.81
TRIM39-201ENST00000376656 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.12■□□□□ 0.81
TRIM39-201ENST00000376656 FOXD4L6Q3SYB3 417 aaPredicted RBP20.11■□□□□ 0.81
TRIM39-201ENST00000376656 FOXD4L3Q6VB84 417 aaPredicted RBP20.11■□□□□ 0.81
TRIM39-201ENST00000376656 PDE1AP54750 535 aa20.1■□□□□ 0.81
TRIM39-201ENST00000376656 TSHZ3Q63HK5 1081 aa20.1■□□□□ 0.81
TRIM39-201ENST00000376656 MPNDQ8N594 471 aa20.1■□□□□ 0.81
TRIM39-201ENST00000376656 RRS1Q15050 365 aaKnown RBP20.1■□□□□ 0.81
TRIM39-201ENST00000376656 SLC52A1Q9NWF4 448 aa20.1■□□□□ 0.81
TRIM39-201ENST00000376656 PALD1Q9ULE6 856 aa20.1■□□□□ 0.81
TRIM39-201ENST00000376656 CDK12Q9NYV4 1490 aaPredicted RBP20.1■□□□□ 0.81
TRIM39-201ENST00000376656 GDPD2Q9HCC8 539 aa20.09■□□□□ 0.81
TRIM39-201ENST00000376656 CPSF1Q10570 1443 aaKnown RBP20.09■□□□□ 0.81
TRIM39-201ENST00000376656 KIAA2012Q0VF49 1180 aa20.09■□□□□ 0.81
TRIM39-201ENST00000376656 CUL4AQ13619 759 aa20.09■□□□□ 0.81
TRIM39-201ENST00000376656 WAPLQ7Z5K2 1190 aa20.09■□□□□ 0.81
TRIM39-201ENST00000376656 MTERF4Q7Z6M4 381 aaKnown RBP20.09■□□□□ 0.81
TRIM39-201ENST00000376656 GADD45BO75293 160 aaPredicted RBP20.09■□□□□ 0.81
TRIM39-201ENST00000376656 ATP7BP35670 1465 aa20.08■□□□□ 0.81
TRIM39-201ENST00000376656 JARID2Q92833 1246 aaPredicted RBP20.08■□□□□ 0.8
TRIM39-201ENST00000376656 OSBPL3Q9H4L5 887 aa20.07■□□□□ 0.8
TRIM39-201ENST00000376656 TMEM131LA2VDJ0 1609 aa20.07■□□□□ 0.8
TRIM39-201ENST00000376656 ALKQ9UM73 1620 aa20.06■□□□□ 0.8
TRIM39-201ENST00000376656 RAPGEF3O95398 923 aa20.06■□□□□ 0.8
TRIM39-201ENST00000376656 MCM2P49736 904 aa20.06■□□□□ 0.8
TRIM39-201ENST00000376656 ZNF830Q96NB3 372 aaPredicted RBP20.06■□□□□ 0.8
TRIM39-201ENST00000376656 ESYT1Q9BSJ8 1104 aa20.06■□□□□ 0.8
TRIM39-201ENST00000376656 SYAP1Q96A49 352 aaPredicted RBP20.05■□□□□ 0.8
TRIM39-201ENST00000376656 DNTTIP2Q5QJE6 756 aaKnown RBP20.05■□□□□ 0.8
TRIM39-201ENST00000376656 AEBP1Q8IUX7 1158 aa20.05■□□□□ 0.8
TRIM39-201ENST00000376656 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
TRIM39-201ENST00000376656 PTPRCP08575 1304 aa20.04■□□□□ 0.8
TRIM39-201ENST00000376656 MCM10Q7L590 875 aa20.04■□□□□ 0.8
TRIM39-201ENST00000376656 HMMRO75330 724 aa20.04■□□□□ 0.8
TRIM39-201ENST00000376656 TSC1Q92574 1164 aa20.04■□□□□ 0.8
TRIM39-201ENST00000376656 EXOC6BQ9Y2D4 811 aa20.04■□□□□ 0.8
TRIM39-201ENST00000376656 USP48Q86UV5 1035 aa20.04■□□□□ 0.8
TRIM39-201ENST00000376656 SMAP1Q8IYB5 467 aaPredicted RBP20.04■□□□□ 0.8
TRIM39-201ENST00000376656 MYRIPQ8NFW9 859 aa20.04■□□□□ 0.8
TRIM39-201ENST00000376656 INTS4Q96HW7 963 aaKnown RBP20.04■□□□□ 0.8
TRIM39-201ENST00000376656 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
TRIM39-201ENST00000376656 CHL1O00533 1208 aa20.03■□□□□ 0.8
TRIM39-201ENST00000376656 SLC4A2P04920 1241 aa20.02■□□□□ 0.8
TRIM39-201ENST00000376656 UPF3BQ9BZI7 483 aaKnown RBP20.02■□□□□ 0.8
TRIM39-201ENST00000376656 ANO2Q9NQ90 1003 aa20.02■□□□□ 0.8
TRIM39-201ENST00000376656 AATKQ6ZMQ8 1374 aa20.02■□□□□ 0.8
TRIM39-201ENST00000376656 SLC4A10Q6U841 1118 aa20.02■□□□□ 0.8
TRIM39-201ENST00000376656 USP25Q9UHP3 1055 aa20.02■□□□□ 0.8
TRIM39-201ENST00000376656 EDC4Q6P2E9 1401 aaKnown RBP20.02■□□□□ 0.8
TRIM39-201ENST00000376656 F6X3S4 739 aa20.02■□□□□ 0.79
TRIM39-201ENST00000376656 MCCP23508 829 aa20.02■□□□□ 0.79
TRIM39-201ENST00000376656 C17orf53Q8N3J3 647 aaPredicted RBP20.01■□□□□ 0.79
TRIM39-201ENST00000376656 HAP1P54257 671 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms