RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 CYP46A1Q9Y6A2 500 aa13.07□□□□□ -0.32
MDC1-201ENST00000376406 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
MDC1-201ENST00000376406 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
MDC1-201ENST00000376406 SYCP2Q9BX26 1530 aa13.06□□□□□ -0.32
MDC1-201ENST00000376406 PPP1R1BQ9UD71 204 aaPredicted RBP13.06□□□□□ -0.32
MDC1-201ENST00000376406 NPHP3Q7Z494 1330 aa13.06□□□□□ -0.32
MDC1-201ENST00000376406 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
MDC1-201ENST00000376406 RPAP2Q8IXW5 612 aaPredicted RBP13.06□□□□□ -0.32
MDC1-201ENST00000376406 TMEM57Q8N5G2 664 aa13.06□□□□□ -0.32
MDC1-201ENST00000376406 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
MDC1-201ENST00000376406 TTC39AQ5SRH9 613 aa13.06□□□□□ -0.32
MDC1-201ENST00000376406 WASLO00401 505 aaPredicted RBP13.06□□□□□ -0.32
MDC1-201ENST00000376406 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
MDC1-201ENST00000376406 TEX35Q5T0J7 233 aa13.06□□□□□ -0.32
MDC1-201ENST00000376406 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
MDC1-201ENST00000376406 ASXL1Q8IXJ9 1541 aa13.06□□□□□ -0.32
MDC1-201ENST00000376406 IGHMBP2P38935 993 aaKnown RBP13.05□□□□□ -0.32
MDC1-201ENST00000376406 MTERF4Q7Z6M4 381 aaKnown RBP13.05□□□□□ -0.32
MDC1-201ENST00000376406 TMOD2Q9NZR1 351 aa13.05□□□□□ -0.32
MDC1-201ENST00000376406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.05□□□□□ -0.32
MDC1-201ENST00000376406 RARSP54136 660 aaKnown RBP13.05□□□□□ -0.32
MDC1-201ENST00000376406 TTC21AQ8NDW8 1320 aa13.05□□□□□ -0.32
MDC1-201ENST00000376406 DISP3Q9P2K9 1392 aa13.05□□□□□ -0.32
MDC1-201ENST00000376406 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
MDC1-201ENST00000376406 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
MDC1-201ENST00000376406 ARGLU1Q9NWB6 273 aaPredicted RBP13.04□□□□□ -0.32
MDC1-201ENST00000376406 NUP160Q12769 1436 aa13.04□□□□□ -0.32
MDC1-201ENST00000376406 EXOC5O00471 708 aa13.04□□□□□ -0.32
MDC1-201ENST00000376406 ZNF771Q7L3S4 317 aaPredicted RBP13.04□□□□□ -0.32
MDC1-201ENST00000376406 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
MDC1-201ENST00000376406 SDF4Q9BRK5 362 aa13.04□□□□□ -0.32
MDC1-201ENST00000376406 PDIA4P13667 645 aaKnown RBP13.03□□□□□ -0.32
MDC1-201ENST00000376406 SLF2Q8IX21 1173 aa13.03□□□□□ -0.32
MDC1-201ENST00000376406 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
MDC1-201ENST00000376406 A0A087WZG4 1122 aa13.03□□□□□ -0.32
MDC1-201ENST00000376406 IDI1Q13907 227 aa13.03□□□□□ -0.32
MDC1-201ENST00000376406 SETQ01105 290 aaPredicted RBP13.03□□□□□ -0.32
MDC1-201ENST00000376406 SHANK2Q9UPX8 1470 aa13.03□□□□□ -0.32
MDC1-201ENST00000376406 DNMT1P26358 1616 aaKnown RBP13.03□□□□□ -0.32
MDC1-201ENST00000376406 CCP110O43303 1012 aa13.03□□□□□ -0.32
MDC1-201ENST00000376406 AKAP2Q9Y2D5 859 aa13.03□□□□□ -0.32
MDC1-201ENST00000376406 NOS1P29475 1434 aa13.02□□□□□ -0.32
MDC1-201ENST00000376406 GRPEL1Q9HAV7 217 aa13.02□□□□□ -0.32
MDC1-201ENST00000376406 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.32
MDC1-201ENST00000376406 MAP7D2Q96T17 732 aa13.02□□□□□ -0.33
MDC1-201ENST00000376406 TRIM5Q9C035 493 aa13.02□□□□□ -0.33
MDC1-201ENST00000376406 DHX8Q14562 1220 aaKnown RBP13.02□□□□□ -0.33
MDC1-201ENST00000376406 KRT28Q7Z3Y7 464 aa13.02□□□□□ -0.33
MDC1-201ENST00000376406 CHD1O14646 1710 aa13.02□□□□□ -0.33
MDC1-201ENST00000376406 TXLNAP40222 546 aa13.02□□□□□ -0.33
MDC1-201ENST00000376406 PRM3Q9NNZ6 103 aa13.01□□□□□ -0.33
MDC1-201ENST00000376406 CCDC192P0DO97 292 aa13.01□□□□□ -0.33
MDC1-201ENST00000376406 LARP1Q6PKG0 1096 aaKnown RBP13.01□□□□□ -0.33
MDC1-201ENST00000376406 MNS1Q8NEH6 495 aa13.01□□□□□ -0.33
MDC1-201ENST00000376406 ZSCAN31Q96LW9 406 aaPredicted RBP13.01□□□□□ -0.33
MDC1-201ENST00000376406 RAB11FIP3O75154 756 aa13.01□□□□□ -0.33
MDC1-201ENST00000376406 MAP4K4O95819 1239 aaPredicted RBP13.01□□□□□ -0.33
MDC1-201ENST00000376406 ZC3H6P61129 1189 aaKnown RBP13.01□□□□□ -0.33
MDC1-201ENST00000376406 PTPRKQ15262 1439 aa13□□□□□ -0.33
MDC1-201ENST00000376406 FIBPO43427 364 aa13□□□□□ -0.33
MDC1-201ENST00000376406 SRGAP3O43295 1099 aa13□□□□□ -0.33
MDC1-201ENST00000376406 AACSQ86V21 672 aa13□□□□□ -0.33
MDC1-201ENST00000376406 BRPF3Q9ULD4 1205 aa13□□□□□ -0.33
MDC1-201ENST00000376406 ADGRF5Q8IZF2 1346 aa13□□□□□ -0.33
MDC1-201ENST00000376406 FYB1O15117 783 aa13□□□□□ -0.33
MDC1-201ENST00000376406 C20orf194Q5TEA3 1177 aa13□□□□□ -0.33
MDC1-201ENST00000376406 CEP126Q9P2H0 1117 aa13□□□□□ -0.33
MDC1-201ENST00000376406 MCM4P33991 863 aa13□□□□□ -0.33
MDC1-201ENST00000376406 DUSP27Q5VZP5 1158 aa13□□□□□ -0.33
MDC1-201ENST00000376406 PDRG1Q9NUG6 133 aa13□□□□□ -0.33
MDC1-201ENST00000376406 UHRF1BP1Q6BDS2 1440 aa13□□□□□ -0.33
MDC1-201ENST00000376406 CTNNA3Q9UI47 895 aa12.99□□□□□ -0.33
MDC1-201ENST00000376406 NUP153P49790 1475 aaKnown RBP12.99□□□□□ -0.33
MDC1-201ENST00000376406 TAF7Q15545 349 aaPredicted RBP12.99□□□□□ -0.33
MDC1-201ENST00000376406 ACBD3Q9H3P7 528 aa12.99□□□□□ -0.33
MDC1-201ENST00000376406 HYPKQ9NX55 129 aa12.99□□□□□ -0.33
MDC1-201ENST00000376406 KRT85P78386 507 aa12.99□□□□□ -0.33
MDC1-201ENST00000376406 SSH1Q8WYL5 1049 aa12.99□□□□□ -0.33
MDC1-201ENST00000376406 PLEKHH1Q9ULM0 1364 aa12.99□□□□□ -0.33
MDC1-201ENST00000376406 SIL1Q9H173 461 aa12.99□□□□□ -0.33
MDC1-201ENST00000376406 JMYQ8N9B5 988 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 ATP10AO60312 1499 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 ANKRD36BQ8N2N9 1353 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 SMC2O95347 1197 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 PDILTQ8N807 584 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 PRAG1Q86YV5 1406 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 TNMDQ9H2S6 317 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 TRPM2O94759 1503 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 ARHGEF12Q9NZN5 1544 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 MYL6BP14649 208 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 KRT32Q14532 448 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 UBAP1LF5GYI3 381 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 CAVIN4Q5BKX8 364 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 RIMS2Q9UQ26 1411 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 STK38Q15208 465 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 PTPRCP08575 1304 aa12.98□□□□□ -0.33
MDC1-201ENST00000376406 GCC2Q8IWJ2 1684 aa12.97□□□□□ -0.33
MDC1-201ENST00000376406 PDE4CQ08493 712 aa12.97□□□□□ -0.33
MDC1-201ENST00000376406 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
MDC1-201ENST00000376406 SMARCC1Q92922 1105 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms