RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 CASTP20810 708 aaKnown RBP20.33■□□□□ 0.85
MCF2L-203ENST00000375604 IGHMBP2P38935 993 aaKnown RBP20.33■□□□□ 0.85
MCF2L-203ENST00000375604 SOGA3Q5TF21 947 aa20.33■□□□□ 0.85
MCF2L-203ENST00000375604 MINDY4BA8MYZ0 360 aa20.33■□□□□ 0.85
MCF2L-203ENST00000375604 CAMK4Q16566 473 aa20.33■□□□□ 0.84
MCF2L-203ENST00000375604 TNMDQ9H2S6 317 aa20.33■□□□□ 0.84
MCF2L-203ENST00000375604 BOLA2Q9H3K6 86 aa20.33■□□□□ 0.84
MCF2L-203ENST00000375604 ANKIB1Q9P2G1 1089 aa20.33■□□□□ 0.84
MCF2L-203ENST00000375604 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.84
MCF2L-203ENST00000375604 SYCP1Q15431 976 aa20.32■□□□□ 0.84
MCF2L-203ENST00000375604 TRIM22Q8IYM9 498 aa20.32■□□□□ 0.84
MCF2L-203ENST00000375604 CCDC82Q8N4S0 544 aa20.32■□□□□ 0.84
MCF2L-203ENST00000375604 RBM10P98175 930 aaKnown RBP20.32■□□□□ 0.84
MCF2L-203ENST00000375604 WDR63Q8IWG1 891 aa20.32■□□□□ 0.84
MCF2L-203ENST00000375604 CEP126Q9P2H0 1117 aa20.32■□□□□ 0.84
MCF2L-203ENST00000375604 NFE2L2Q16236 605 aa20.31■□□□□ 0.84
MCF2L-203ENST00000375604 UBAC1Q9BSL1 405 aa20.31■□□□□ 0.84
MCF2L-203ENST00000375604 SLC52A1Q9NWF4 448 aa20.31■□□□□ 0.84
MCF2L-203ENST00000375604 HFM1A2PYH4 1435 aa20.31■□□□□ 0.84
MCF2L-203ENST00000375604 GPTP24298 496 aa20.31■□□□□ 0.84
MCF2L-203ENST00000375604 ZNF76P36508 570 aa20.31■□□□□ 0.84
MCF2L-203ENST00000375604 TEX35Q5T0J7 233 aa20.31■□□□□ 0.84
MCF2L-203ENST00000375604 C20orf194Q5TEA3 1177 aa20.31■□□□□ 0.84
MCF2L-203ENST00000375604 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.31■□□□□ 0.84
MCF2L-203ENST00000375604 TROQ12816 1431 aaPredicted RBP20.31■□□□□ 0.84
MCF2L-203ENST00000375604 FILIP1LQ4L180 1135 aa20.31■□□□□ 0.84
MCF2L-203ENST00000375604 K7ELQ4 463 aaPredicted RBP20.31■□□□□ 0.84
MCF2L-203ENST00000375604 PDE3AQ14432 1141 aa20.3■□□□□ 0.84
MCF2L-203ENST00000375604 CCDC8Q9H0W5 538 aaPredicted RBP20.3■□□□□ 0.84
MCF2L-203ENST00000375604 PPFIA3O75145 1194 aa20.3■□□□□ 0.84
MCF2L-203ENST00000375604 AIDAQ96BJ3 306 aa20.3■□□□□ 0.84
MCF2L-203ENST00000375604 ZPR1O75312 459 aa20.3■□□□□ 0.84
MCF2L-203ENST00000375604 PDCL3Q9H2J4 239 aa20.3■□□□□ 0.84
MCF2L-203ENST00000375604 MYCNP04198 464 aaPredicted RBP20.29■□□□□ 0.84
MCF2L-203ENST00000375604 GUCY1B3Q02153 619 aa20.29■□□□□ 0.84
MCF2L-203ENST00000375604 DHX8Q14562 1220 aaKnown RBP20.29■□□□□ 0.84
MCF2L-203ENST00000375604 BLOC1S2Q6QNY1 142 aa20.29■□□□□ 0.84
MCF2L-203ENST00000375604 STARD3NLO95772 234 aa20.28■□□□□ 0.84
MCF2L-203ENST00000375604 TRMT1LQ7Z2T5 733 aaKnown RBP20.28■□□□□ 0.84
MCF2L-203ENST00000375604 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
MCF2L-203ENST00000375604 TIAM1Q13009 1591 aa20.28■□□□□ 0.84
MCF2L-203ENST00000375604 WWC3Q9ULE0 1092 aa20.27■□□□□ 0.84
MCF2L-203ENST00000375604 PRPF40BQ6NWY9 871 aaKnown RBP20.27■□□□□ 0.84
MCF2L-203ENST00000375604 SMARCE1Q969G3 411 aa20.27■□□□□ 0.84
MCF2L-203ENST00000375604 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.83
MCF2L-203ENST00000375604 MRE11P49959 708 aa20.27■□□□□ 0.83
MCF2L-203ENST00000375604 DEF6Q9H4E7 631 aa20.27■□□□□ 0.83
MCF2L-203ENST00000375604 CCDC83Q8IWF9 413 aa20.26■□□□□ 0.83
MCF2L-203ENST00000375604 SPATA32Q96LK8 384 aa20.26■□□□□ 0.83
MCF2L-203ENST00000375604 AAMPQ13685 434 aa20.26■□□□□ 0.83
MCF2L-203ENST00000375604 FERMT3Q86UX7 667 aa20.26■□□□□ 0.83
MCF2L-203ENST00000375604 FCHSD2O94868 740 aa20.26■□□□□ 0.83
MCF2L-203ENST00000375604 LETM1O95202 739 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-203ENST00000375604 POLR3DP05423 398 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-203ENST00000375604 ARGLU1Q9NWB6 273 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-203ENST00000375604 AMOTL2Q9Y2J4 779 aa20.26■□□□□ 0.83
MCF2L-203ENST00000375604 ZBTB3Q9H5J0 574 aa20.25■□□□□ 0.83
MCF2L-203ENST00000375604 TSHZ3Q63HK5 1081 aa20.25■□□□□ 0.83
MCF2L-203ENST00000375604 TAF7Q15545 349 aaPredicted RBP20.25■□□□□ 0.83
MCF2L-203ENST00000375604 PDCP20941 246 aa20.25■□□□□ 0.83
MCF2L-203ENST00000375604 CCDC173Q0VFZ6 552 aa20.25■□□□□ 0.83
MCF2L-203ENST00000375604 ADGRF5Q8IZF2 1346 aa20.25■□□□□ 0.83
MCF2L-203ENST00000375604 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
MCF2L-203ENST00000375604 FAM83GA6ND36 823 aa20.24■□□□□ 0.83
MCF2L-203ENST00000375604 CCDC144CPQ8IYA2 1237 aa20.24■□□□□ 0.83
MCF2L-203ENST00000375604 CHRNA2Q15822 529 aa20.24■□□□□ 0.83
MCF2L-203ENST00000375604 RAB11FIP4Q86YS3 637 aa20.24■□□□□ 0.83
MCF2L-203ENST00000375604 ANKRD30BQ9BXX2 1392 aa20.24■□□□□ 0.83
MCF2L-203ENST00000375604 ANKRD1Q15327 319 aa20.23■□□□□ 0.83
MCF2L-203ENST00000375604 CCDC61Q9Y6R9 512 aa20.23■□□□□ 0.83
MCF2L-203ENST00000375604 SLFN5Q08AF3 891 aa20.23■□□□□ 0.83
MCF2L-203ENST00000375604 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
MCF2L-203ENST00000375604 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
MCF2L-203ENST00000375604 PLB1Q6P1J6 1458 aa20.23■□□□□ 0.83
MCF2L-203ENST00000375604 ATAD2Q6PL18 1390 aa20.22■□□□□ 0.83
MCF2L-203ENST00000375604 PCF11O94913 1555 aaKnown RBP20.22■□□□□ 0.83
MCF2L-203ENST00000375604 TRMT112Q9UI30 125 aaKnown RBP20.22■□□□□ 0.83
MCF2L-203ENST00000375604 HSP90B2PQ58FF3 399 aa20.22■□□□□ 0.83
MCF2L-203ENST00000375604 LRRFIP2Q9Y608 721 aaKnown RBP20.22■□□□□ 0.83
MCF2L-203ENST00000375604 IMMTQ16891 758 aaKnown RBP20.22■□□□□ 0.83
MCF2L-203ENST00000375604 MCM2P49736 904 aa20.22■□□□□ 0.83
MCF2L-203ENST00000375604 PPFIBP1Q86W92 1011 aa20.22■□□□□ 0.83
MCF2L-203ENST00000375604 CRACR2BQ8N4Y2 399 aaPredicted RBP20.22■□□□□ 0.83
MCF2L-203ENST00000375604 NGLY1Q96IV0 654 aa20.22■□□□□ 0.83
MCF2L-203ENST00000375604 TOP2BQ02880 1626 aa20.21■□□□□ 0.83
MCF2L-203ENST00000375604 PAXIP1Q6ZW49 1069 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-203ENST00000375604 AEBP1Q8IUX7 1158 aa20.21■□□□□ 0.83
MCF2L-203ENST00000375604 UPF3BQ9BZI7 483 aaKnown RBP20.21■□□□□ 0.83
MCF2L-203ENST00000375604 FAM193AP78312 1265 aa20.21■□□□□ 0.83
MCF2L-203ENST00000375604 CD109Q6YHK3 1445 aa20.21■□□□□ 0.83
MCF2L-203ENST00000375604 POGZQ7Z3K3 1410 aa20.21■□□□□ 0.83
MCF2L-203ENST00000375604 CAMSAP2Q08AD1 1489 aa20.21■□□□□ 0.83
MCF2L-203ENST00000375604 NOM1Q5C9Z4 860 aaKnown RBP20.21■□□□□ 0.83
MCF2L-203ENST00000375604 EPRSP07814 1512 aaKnown RBP20.2■□□□□ 0.82
MCF2L-203ENST00000375604 TMX1Q9H3N1 280 aa20.2■□□□□ 0.82
MCF2L-203ENST00000375604 NOL7Q9UMY1 257 aaKnown RBP20.2■□□□□ 0.82
MCF2L-203ENST00000375604 ANXA1P04083 346 aa20.2■□□□□ 0.82
MCF2L-203ENST00000375604 IFIT1P09914 478 aaKnown RBP20.2■□□□□ 0.82
MCF2L-203ENST00000375604 PIP4K2AP48426 406 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-203ENST00000375604 TTLL12Q14166 644 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms