RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 PARP4Q9UKK3 1724 aaKnown RBP27.31■■□□□ 1.96
NELFE-202ENST00000375429 SENP3-EIF4A1A0A087X0R7 540 aa27.31■■□□□ 1.96
NELFE-202ENST00000375429 NEFMP07197 916 aa27.31■■□□□ 1.96
NELFE-202ENST00000375429 FAM98CQ17RN3 349 aaKnown RBP27.31■■□□□ 1.96
NELFE-202ENST00000375429 OVOS2A0A0G2JMS6 1433 aa27.31■■□□□ 1.96
NELFE-202ENST00000375429 APAF1O14727 1248 aa27.31■■□□□ 1.96
NELFE-202ENST00000375429 MTHFSDQ2M296 383 aaKnown RBP27.31■■□□□ 1.96
NELFE-202ENST00000375429 PLEKHO1Q53GL0 409 aaPredicted RBP27.29■■□□□ 1.96
NELFE-202ENST00000375429 CDCA7Q9BWT1 371 aaPredicted RBP27.29■■□□□ 1.96
NELFE-202ENST00000375429 AMOTQ4VCS5 1084 aa27.28■■□□□ 1.96
NELFE-202ENST00000375429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.27■■□□□ 1.962e-7■■□□□ 13.6
NELFE-202ENST00000375429 PKD1L3Q7Z443 1732 aa27.27■■□□□ 1.96
NELFE-202ENST00000375429 TMPOP42166 694 aaKnown RBP27.26■■□□□ 1.96
NELFE-202ENST00000375429 POTEAQ6S8J7 498 aa27.26■■□□□ 1.96
NELFE-202ENST00000375429 ZCRB1Q8TBF4 217 aaKnown RBP27.26■■□□□ 1.96
NELFE-202ENST00000375429 PLEKHG2Q9H7P9 1386 aa27.26■■□□□ 1.96
NELFE-202ENST00000375429 ONECUT3O60422 494 aaPredicted RBP27.26■■□□□ 1.95
NELFE-202ENST00000375429 SPG7Q9UQ90 795 aa27.26■■□□□ 1.95
NELFE-202ENST00000375429 RRP7AQ9Y3A4 280 aaKnown RBP27.26■■□□□ 1.95
NELFE-202ENST00000375429 RBM6P78332 1123 aaKnown RBP27.25■■□□□ 1.95
NELFE-202ENST00000375429 NFE2L2Q16236 605 aa27.25■■□□□ 1.95
NELFE-202ENST00000375429 DLG5Q8TDM6 1919 aa27.24■■□□□ 1.95
NELFE-202ENST00000375429 NEUROD2Q15784 382 aa27.24■■□□□ 1.95
NELFE-202ENST00000375429 GAS2L2Q8NHY3 880 aa27.24■■□□□ 1.95
NELFE-202ENST00000375429 EXOC5O00471 708 aa27.23■■□□□ 1.95
NELFE-202ENST00000375429 SHANK3Q9BYB0 1731 aa27.23■■□□□ 1.95
NELFE-202ENST00000375429 ZNF530Q6P9A1 599 aaPredicted RBP27.22■■□□□ 1.95
NELFE-202ENST00000375429 THSD7AQ9UPZ6 1657 aa27.22■■□□□ 1.95
NELFE-202ENST00000375429 RIPK4P57078 832 aa27.22■■□□□ 1.95
NELFE-202ENST00000375429 DDB1Q16531 1140 aa27.22■■□□□ 1.95
NELFE-202ENST00000375429 SALL2Q9Y467 1007 aaPredicted RBP27.22■■□□□ 1.95
NELFE-202ENST00000375429 RXRBP28702 533 aa27.21■■□□□ 1.95
NELFE-202ENST00000375429 LRRC37A3O60309 1634 aa27.2■■□□□ 1.95
NELFE-202ENST00000375429 A0A0G2JS52 829 aa27.2■■□□□ 1.94
NELFE-202ENST00000375429 CYP27B1O15528 508 aa27.2■■□□□ 1.94
NELFE-202ENST00000375429 HNRNPUQ00839 825 aaKnown RBP eCLIP27.2■■□□□ 1.94
NELFE-202ENST00000375429 MYT1Q01538 1121 aa27.2■■□□□ 1.94
NELFE-202ENST00000375429 SEPT12Q8IYM1 358 aa27.19■■□□□ 1.94
NELFE-202ENST00000375429 DDX54Q8TDD1 881 aaKnown RBP27.19■■□□□ 1.94
NELFE-202ENST00000375429 TNS2Q63HR2 1409 aa27.18■■□□□ 1.94
NELFE-202ENST00000375429 PCDH11XQ9BZA7 1347 aa27.18■■□□□ 1.94
NELFE-202ENST00000375429 PCDH11YQ9BZA8 1340 aa27.18■■□□□ 1.94
NELFE-202ENST00000375429 PHKG2P15735 406 aa27.18■■□□□ 1.94
NELFE-202ENST00000375429 AKAP4Q5JQC9 854 aa27.18■■□□□ 1.94
NELFE-202ENST00000375429 IFNL2Q8IZJ0 200 aa27.18■■□□□ 1.94
NELFE-202ENST00000375429 C1orf141Q5JVX7 400 aa27.17■■□□□ 1.94
NELFE-202ENST00000375429 TRIM35Q9UPQ4 493 aa27.17■■□□□ 1.94
NELFE-202ENST00000375429 GNAT3A8MTJ3 354 aa27.16■■□□□ 1.94
NELFE-202ENST00000375429 YTHDC1Q96MU7 727 aaKnown RBP27.16■■□□□ 1.94
NELFE-202ENST00000375429 MAP3K5Q99683 1374 aa27.14■■□□□ 1.94
NELFE-202ENST00000375429 NCBP3Q53F19 620 aaKnown RBP27.14■■□□□ 1.94
NELFE-202ENST00000375429 DCTN1Q14203 1278 aa27.13■■□□□ 1.93
NELFE-202ENST00000375429 NGEFQ8N5V2 710 aa27.13■■□□□ 1.93
NELFE-202ENST00000375429 MARCH10Q8NA82 808 aaPredicted RBP27.13■■□□□ 1.93
NELFE-202ENST00000375429 CCDC27Q2M243 656 aa27.12■■□□□ 1.93
NELFE-202ENST00000375429 MPRIPQ6WCQ1 1025 aa27.12■■□□□ 1.93
NELFE-202ENST00000375429 BRWD3Q6RI45 1802 aa27.12■■□□□ 1.93
NELFE-202ENST00000375429 VIRMAQ69YN4 1812 aaKnown RBP27.11■■□□□ 1.93
NELFE-202ENST00000375429 HTATSF1O43719 755 aaKnown RBP27.11■■□□□ 1.93
NELFE-202ENST00000375429 PDE3BQ13370 1112 aa27.11■■□□□ 1.93
NELFE-202ENST00000375429 WWC1Q8IX03 1113 aa27.11■■□□□ 1.93
NELFE-202ENST00000375429 IL17REQ8NFR9 667 aa27.11■■□□□ 1.93
NELFE-202ENST00000375429 NKX1-1Q15270 411 aaPredicted RBP27.1■■□□□ 1.93
NELFE-202ENST00000375429 MCM10Q7L590 875 aa27.1■■□□□ 1.93
NELFE-202ENST00000375429 RTF1Q92541 710 aaKnown RBP27.1■■□□□ 1.93
NELFE-202ENST00000375429 LGR6Q9HBX8 967 aa27.1■■□□□ 1.93
NELFE-202ENST00000375429 LMOD3Q0VAK6 560 aa27.09■■□□□ 1.93
NELFE-202ENST00000375429 THUMPD2Q9BTF0 503 aaKnown RBP27.09■■□□□ 1.93
NELFE-202ENST00000375429 RNMTO43148 476 aaKnown RBP27.08■■□□□ 1.93
NELFE-202ENST00000375429 HSP90AB1P08238 724 aaKnown RBP27.08■■□□□ 1.93
NELFE-202ENST00000375429 RGS12O14924 1447 aa27.07■■□□□ 1.92
NELFE-202ENST00000375429 KDM6AO15550 1401 aaPredicted RBP27.07■■□□□ 1.92
NELFE-202ENST00000375429 SCN11AQ9UI33 1791 aa27.07■■□□□ 1.92
NELFE-202ENST00000375429 DCAF5Q96JK2 942 aa27.07■■□□□ 1.92
NELFE-202ENST00000375429 ADAMTS7Q9UKP4 1686 aa27.06■■□□□ 1.92
NELFE-202ENST00000375429 ZNF521Q96K83 1311 aa27.06■■□□□ 1.92
NELFE-202ENST00000375429 FAM182BQ5T319 152 aa27.05■■□□□ 1.92
NELFE-202ENST00000375429 KRT27Q7Z3Y8 459 aa27.05■■□□□ 1.92
NELFE-202ENST00000375429 CEMIPQ8WUJ3 1361 aa27.05■■□□□ 1.92
NELFE-202ENST00000375429 ZBED9Q6R2W3 1325 aa27.04■■□□□ 1.92
NELFE-202ENST00000375429 KAT6BQ8WYB5 2073 aa27.03■■□□□ 1.92
NELFE-202ENST00000375429 WDR63Q8IWG1 891 aa27.01■■□□□ 1.92
NELFE-202ENST00000375429 TOGARAM1Q9Y4F4 1720 aa27.01■■□□□ 1.91
NELFE-202ENST00000375429 ERVV-2B6SEH9 535 aa26.99■■□□□ 1.91
NELFE-202ENST00000375429 ITGB4P16144 1822 aa26.98■■□□□ 1.91
NELFE-202ENST00000375429 TEFQ10587 303 aa26.97■■□□□ 1.91
NELFE-202ENST00000375429 DOT1LQ8TEK3 1739 aa26.97■■□□□ 1.91
NELFE-202ENST00000375429 SLC52A2Q9HAB3 445 aa26.97■■□□□ 1.91
NELFE-202ENST00000375429 CABP4P57796 275 aa26.97■■□□□ 1.91
NELFE-202ENST00000375429 GOLGA2Q08379 1002 aa26.97■■□□□ 1.91
NELFE-202ENST00000375429 NFATC2IPQ8NCF5 419 aa26.97■■□□□ 1.91
NELFE-202ENST00000375429 ACSBG1Q96GR2 724 aa26.97■■□□□ 1.91
NELFE-202ENST00000375429 SPINK5Q9NQ38 1064 aaPredicted RBP26.97■■□□□ 1.91
NELFE-202ENST00000375429 SIPA1L3O60292 1781 aaPredicted RBP26.96■■□□□ 1.91
NELFE-202ENST00000375429 CALD1Q05682 793 aaKnown RBP26.96■■□□□ 1.91
NELFE-202ENST00000375429 CDCA7LQ96GN5 454 aa26.96■■□□□ 1.91
NELFE-202ENST00000375429 BCL9O00512 1426 aa26.95■■□□□ 1.91
NELFE-202ENST00000375429 PRIM1P49642 420 aaKnown RBP26.95■■□□□ 1.9
NELFE-202ENST00000375429 TAF7Q15545 349 aaPredicted RBP26.95■■□□□ 1.9
NELFE-202ENST00000375429 MRC1P22897 1456 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms