RNA–Protein interactions for RNA: ENST00000374602.2

TCEA3-202, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-202ENST00000374602 ACSBG1Q96GR2 724 aa9.16□□□□□ -0.94
TCEA3-202ENST00000374602 SLC27A3Q5K4L6 730 aa9.15□□□□□ -0.94
TCEA3-202ENST00000374602 PELP1Q8IZL8 1130 aaKnown RBP9.15□□□□□ -0.94
TCEA3-202ENST00000374602 SLC16A10Q8TF71 515 aa9.15□□□□□ -0.94
TCEA3-202ENST00000374602 USP31Q70CQ4 1352 aa9.14□□□□□ -0.95
TCEA3-202ENST00000374602 SBNO2Q9Y2G9 1366 aa9.14□□□□□ -0.95
TCEA3-202ENST00000374602 HMGB2P26583 209 aaKnown RBP9.14□□□□□ -0.95
TCEA3-202ENST00000374602 HDGFL2Q7Z4V5 671 aaPredicted RBP9.14□□□□□ -0.95
TCEA3-202ENST00000374602 SGIP1Q9BQI5 828 aa9.14□□□□□ -0.95
TCEA3-202ENST00000374602 EDC4Q6P2E9 1401 aaKnown RBP9.14□□□□□ -0.95
TCEA3-202ENST00000374602 C1QBPQ07021 282 aaKnown RBP9.13□□□□□ -0.95
TCEA3-202ENST00000374602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.13□□□□□ -0.95
TCEA3-202ENST00000374602 ANKRD24Q8TF21 1146 aa9.13□□□□□ -0.95
TCEA3-202ENST00000374602 SHANK3Q9BYB0 1731 aa9.13□□□□□ -0.95
TCEA3-202ENST00000374602 C5P01031 1676 aa9.13□□□□□ -0.95
TCEA3-202ENST00000374602 TFCP2L1Q9NZI6 479 aa9.12□□□□□ -0.95
TCEA3-202ENST00000374602 RGPD2P0DJD1 1756 aa9.12□□□□□ -0.95
TCEA3-202ENST00000374602 GRIN3BO60391 1043 aa9.11□□□□□ -0.95
TCEA3-202ENST00000374602 ZNF827Q17R98 1081 aa9.11□□□□□ -0.95
TCEA3-202ENST00000374602 TMC1Q8TDI8 760 aa9.11□□□□□ -0.95
TCEA3-202ENST00000374602 SYTL4Q96C24 671 aaPredicted RBP9.11□□□□□ -0.95
TCEA3-202ENST00000374602 TERF2IPQ9NYB0 399 aa9.11□□□□□ -0.95
TCEA3-202ENST00000374602 SMG6Q86US8 1419 aaKnown RBP9.11□□□□□ -0.95
TCEA3-202ENST00000374602 ANKRD36BQ8N2N9 1353 aa9.11□□□□□ -0.95
TCEA3-202ENST00000374602 TAF1LQ8IZX4 1826 aa9.1□□□□□ -0.95
TCEA3-202ENST00000374602 ZNF316A6NFI3 1004 aaPredicted RBP9.1□□□□□ -0.95
TCEA3-202ENST00000374602 USP47Q96K76 1375 aa9.1□□□□□ -0.95
TCEA3-202ENST00000374602 NME9Q86XW9 330 aa9.09□□□□□ -0.95
TCEA3-202ENST00000374602 DDX54Q8TDD1 881 aaKnown RBP9.09□□□□□ -0.95
TCEA3-202ENST00000374602 KIF20BQ96Q89 1820 aa9.09□□□□□ -0.95
TCEA3-202ENST00000374602 CD163L1Q9NR16 1453 aa9.08□□□□□ -0.96
TCEA3-202ENST00000374602 PNPLA7Q6ZV29 1317 aa9.08□□□□□ -0.96
TCEA3-202ENST00000374602 NSD3Q9BZ95 1437 aa9.08□□□□□ -0.96
TCEA3-202ENST00000374602 AKT1S1Q96B36 256 aa9.08□□□□□ -0.96
TCEA3-202ENST00000374602 LRRC4BQ9NT99 713 aa9.08□□□□□ -0.96
TCEA3-202ENST00000374602 CCNL1Q9UK58 526 aaPredicted RBP9.08□□□□□ -0.96
TCEA3-202ENST00000374602 A0A1W2PP64 1363 aa9.08□□□□□ -0.96
TCEA3-202ENST00000374602 RTL1A6NKG5 1358 aa9.08□□□□□ -0.96
TCEA3-202ENST00000374602 LTV1Q96GA3 475 aaPredicted RBP9.07□□□□□ -0.96
TCEA3-202ENST00000374602 COG3Q96JB2 828 aa9.07□□□□□ -0.96
TCEA3-202ENST00000374602 CARD11Q9BXL7 1154 aa9.07□□□□□ -0.96
TCEA3-202ENST00000374602 CGNL1Q0VF96 1302 aa9.06□□□□□ -0.96
TCEA3-202ENST00000374602 CEP350Q5VT06 3117 aa9.06□□□□□ -0.96
TCEA3-202ENST00000374602 ITGB4P16144 1822 aa9.06□□□□□ -0.96
TCEA3-202ENST00000374602 AMPHP49418 695 aa9.06□□□□□ -0.96
TCEA3-202ENST00000374602 EIF4G2P78344 907 aaKnown RBP eCLIP9.06□□□□□ -0.96
TCEA3-202ENST00000374602 IP6K1Q92551 441 aa9.06□□□□□ -0.96
TCEA3-202ENST00000374602 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
TCEA3-202ENST00000374602 MEGF6O75095 1541 aa9.05□□□□□ -0.96
TCEA3-202ENST00000374602 UBR3Q6ZT12 1888 aa9.05□□□□□ -0.96
TCEA3-202ENST00000374602 SLC24A1O60721 1099 aa9.05□□□□□ -0.96
TCEA3-202ENST00000374602 PRIM1P49642 420 aaKnown RBP9.05□□□□□ -0.96
TCEA3-202ENST00000374602 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
TCEA3-202ENST00000374602 FLAD1Q8NFF5 587 aa9.05□□□□□ -0.96
TCEA3-202ENST00000374602 NLGN2Q8NFZ4 835 aa9.05□□□□□ -0.96
TCEA3-202ENST00000374602 ZCRB1Q8TBF4 217 aaKnown RBP9.05□□□□□ -0.96
TCEA3-202ENST00000374602 RAPGEF4Q8WZA2 1011 aa9.05□□□□□ -0.96
TCEA3-202ENST00000374602 GPBP1L1Q9HC44 474 aaPredicted RBP9.05□□□□□ -0.96
TCEA3-202ENST00000374602 C4BP0C0L5 1744 aa9.05□□□□□ -0.96
TCEA3-202ENST00000374602 PUS7Q96PZ0 661 aaKnown RBP9.04□□□□□ -0.96
TCEA3-202ENST00000374602 PKD1L3Q7Z443 1732 aa9.04□□□□□ -0.96
TCEA3-202ENST00000374602 PCDH11XQ9BZA7 1347 aa9.04□□□□□ -0.96
TCEA3-202ENST00000374602 PCDH11YQ9BZA8 1340 aa9.04□□□□□ -0.96
TCEA3-202ENST00000374602 NSD2O96028 1365 aa9.03□□□□□ -0.96
TCEA3-202ENST00000374602 MAP3K19Q56UN5 1328 aa9.03□□□□□ -0.96
TCEA3-202ENST00000374602 PALLDQ8WX93 1383 aa9.02□□□□□ -0.97
TCEA3-202ENST00000374602 HSPA5P11021 654 aaKnown RBP9.02□□□□□ -0.97
TCEA3-202ENST00000374602 TATP17735 454 aaPredicted RBP9.02□□□□□ -0.97
TCEA3-202ENST00000374602 HOXC9P31274 260 aa9.02□□□□□ -0.97
TCEA3-202ENST00000374602 MSL1Q68DK7 614 aa9.02□□□□□ -0.97
TCEA3-202ENST00000374602 AK7Q96M32 723 aa9.02□□□□□ -0.97
TCEA3-202ENST00000374602 SLC12A5Q9H2X9 1139 aa9.02□□□□□ -0.97
TCEA3-202ENST00000374602 ZNF219Q9P2Y4 722 aaPredicted RBP9.02□□□□□ -0.97
TCEA3-202ENST00000374602 CD2APQ9Y5K6 639 aa9.02□□□□□ -0.97
TCEA3-202ENST00000374602 TOGARAM1Q9Y4F4 1720 aa9.02□□□□□ -0.97
TCEA3-202ENST00000374602 YBX3P16989 372 aaKnown RBP eCLIP9.01□□□□□ -0.97
TCEA3-202ENST00000374602 KCNQ4P56696 695 aa9.01□□□□□ -0.97
TCEA3-202ENST00000374602 ADCY9O60503 1353 aa9□□□□□ -0.97
TCEA3-202ENST00000374602 COL23A1Q86Y22 540 aaPredicted RBP9□□□□□ -0.97
TCEA3-202ENST00000374602 SMARCC1Q92922 1105 aaPredicted RBP9□□□□□ -0.97
TCEA3-202ENST00000374602 CICQ96RK0 1608 aaPredicted RBP9□□□□□ -0.97
TCEA3-202ENST00000374602 FLT4P35916 1363 aa8.99□□□□□ -0.97
TCEA3-202ENST00000374602 KIF24Q5T7B8 1368 aa8.99□□□□□ -0.97
TCEA3-202ENST00000374602 KIF13BQ9NQT8 1826 aa8.99□□□□□ -0.97
TCEA3-202ENST00000374602 HSPA6P17066 643 aa8.99□□□□□ -0.97
TCEA3-202ENST00000374602 ZNF526Q8TF50 670 aaPredicted RBP8.99□□□□□ -0.97
TCEA3-202ENST00000374602 ANKRD26Q9UPS8 1709 aa8.99□□□□□ -0.97
TCEA3-202ENST00000374602 MPRIPQ6WCQ1 1025 aa8.98□□□□□ -0.97
TCEA3-202ENST00000374602 IGSF1Q8N6C5 1336 aa8.98□□□□□ -0.97
TCEA3-202ENST00000374602 MAP2P11137 1827 aaKnown RBP8.98□□□□□ -0.97
TCEA3-202ENST00000374602 INSRP06213 1382 aa8.98□□□□□ -0.97
TCEA3-202ENST00000374602 CAPN15O75808 1086 aa8.97□□□□□ -0.97
TCEA3-202ENST00000374602 PHF14O94880 888 aa8.97□□□□□ -0.97
TCEA3-202ENST00000374602 SSFA2P28290 1259 aa8.97□□□□□ -0.97
TCEA3-202ENST00000374602 RRS1Q15050 365 aaKnown RBP8.97□□□□□ -0.97
TCEA3-202ENST00000374602 DIEXFQ68CQ4 756 aaKnown RBP8.97□□□□□ -0.97
TCEA3-202ENST00000374602 USHBP1Q8N6Y0 703 aa8.97□□□□□ -0.97
TCEA3-202ENST00000374602 N4BP2Q86UW6 1770 aaPredicted RBP8.96□□□□□ -0.97
TCEA3-202ENST00000374602 ARFGEF1Q9Y6D6 1849 aa8.96□□□□□ -0.97
TCEA3-202ENST00000374602 BRCA1P38398 1863 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms