RNA–Protein interactions for RNA: ENST00000372499.5

LRMDA-201, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRMDA, Length 899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-201ENST00000372499 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.37
LRMDA-201ENST00000372499 KAT6BQ8WYB5 2073 aa12.71□□□□□ -0.38
LRMDA-201ENST00000372499 ANKRD26Q9UPS8 1709 aa12.71□□□□□ -0.38
LRMDA-201ENST00000372499 HSPA5P11021 654 aaKnown RBP12.7□□□□□ -0.38
LRMDA-201ENST00000372499 EIF4G2P78344 907 aaKnown RBP eCLIP12.7□□□□□ -0.38
LRMDA-201ENST00000372499 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
LRMDA-201ENST00000372499 ZCRB1Q8TBF4 217 aaKnown RBP12.7□□□□□ -0.38
LRMDA-201ENST00000372499 SPON1Q9HCB6 807 aa12.7□□□□□ -0.38
LRMDA-201ENST00000372499 EMILIN1Q9Y6C2 1016 aa12.7□□□□□ -0.38
LRMDA-201ENST00000372499 NCAPD2Q15021 1401 aa12.7□□□□□ -0.38
LRMDA-201ENST00000372499 NSD2O96028 1365 aa12.69□□□□□ -0.38
LRMDA-201ENST00000372499 CGNL1Q0VF96 1302 aa12.69□□□□□ -0.38
LRMDA-201ENST00000372499 SLC15A2Q16348 729 aa12.69□□□□□ -0.38
LRMDA-201ENST00000372499 USHBP1Q8N6Y0 703 aa12.69□□□□□ -0.38
LRMDA-201ENST00000372499 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
LRMDA-201ENST00000372499 SMG6Q86US8 1419 aaKnown RBP12.69□□□□□ -0.38
LRMDA-201ENST00000372499 STK32BQ9NY57 414 aa12.68□□□□□ -0.38
LRMDA-201ENST00000372499 DOT1LQ8TEK3 1739 aa12.68□□□□□ -0.38
LRMDA-201ENST00000372499 WASHC2AQ641Q2 1341 aa12.67□□□□□ -0.38
LRMDA-201ENST00000372499 PTGER2P43116 358 aa12.67□□□□□ -0.38
LRMDA-201ENST00000372499 PRIM1P49642 420 aaKnown RBP12.67□□□□□ -0.38
LRMDA-201ENST00000372499 ZNF827Q17R98 1081 aa12.66□□□□□ -0.38
LRMDA-201ENST00000372499 RAPGEF4Q8WZA2 1011 aa12.66□□□□□ -0.38
LRMDA-201ENST00000372499 POLKQ9UBT6 870 aa12.66□□□□□ -0.38
LRMDA-201ENST00000372499 MAP2P11137 1827 aaKnown RBP12.66□□□□□ -0.38
LRMDA-201ENST00000372499 ZBTB7AO95365 584 aa12.65□□□□□ -0.38
LRMDA-201ENST00000372499 SLC27A3Q5K4L6 730 aa12.65□□□□□ -0.38
LRMDA-201ENST00000372499 SGIP1Q9BQI5 828 aa12.65□□□□□ -0.38
LRMDA-201ENST00000372499 PANK3Q9H999 370 aa12.65□□□□□ -0.38
LRMDA-201ENST00000372499 LY75O60449 1722 aa12.65□□□□□ -0.38
LRMDA-201ENST00000372499 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
LRMDA-201ENST00000372499 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
LRMDA-201ENST00000372499 POLR3GLQ9BT43 218 aa12.64□□□□□ -0.39
LRMDA-201ENST00000372499 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
LRMDA-201ENST00000372499 PCDH11XQ9BZA7 1347 aa12.63□□□□□ -0.39
LRMDA-201ENST00000372499 PCDH11YQ9BZA8 1340 aa12.63□□□□□ -0.39
LRMDA-201ENST00000372499 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
LRMDA-201ENST00000372499 CYP27B1O15528 508 aa12.63□□□□□ -0.39
LRMDA-201ENST00000372499 SYTL4Q96C24 671 aaPredicted RBP12.63□□□□□ -0.39
LRMDA-201ENST00000372499 EYA1Q99502 592 aa12.63□□□□□ -0.39
LRMDA-201ENST00000372499 KCNQ4P56696 695 aa12.62□□□□□ -0.39
LRMDA-201ENST00000372499 MTFR1LQ9H019 292 aa12.62□□□□□ -0.39
LRMDA-201ENST00000372499 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
LRMDA-201ENST00000372499 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
LRMDA-201ENST00000372499 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
LRMDA-201ENST00000372499 TOGARAM1Q9Y4F4 1720 aa12.61□□□□□ -0.39
LRMDA-201ENST00000372499 TNNT2P45379 298 aaPredicted RBP12.6□□□□□ -0.39
LRMDA-201ENST00000372499 EIF4A2Q14240 407 aaKnown RBP12.6□□□□□ -0.39
LRMDA-201ENST00000372499 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
LRMDA-201ENST00000372499 TUBGCP6Q96RT7 1819 aa12.6□□□□□ -0.39
LRMDA-201ENST00000372499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.399e-6■□□□□ 9.4
LRMDA-201ENST00000372499 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
LRMDA-201ENST00000372499 PNPLA7Q6ZV29 1317 aa12.59□□□□□ -0.39
LRMDA-201ENST00000372499 PLEKHG2Q9H7P9 1386 aa12.58□□□□□ -0.4
LRMDA-201ENST00000372499 UTRNP46939 3433 aa12.58□□□□□ -0.4
LRMDA-201ENST00000372499 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.4
LRMDA-201ENST00000372499 KIF7Q2M1P5 1343 aa12.58□□□□□ -0.4
LRMDA-201ENST00000372499 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.4
LRMDA-201ENST00000372499 ITGB4P16144 1822 aa12.58□□□□□ -0.4
LRMDA-201ENST00000372499 AMER1Q5JTC6 1135 aaPredicted RBP12.57□□□□□ -0.4
LRMDA-201ENST00000372499 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
LRMDA-201ENST00000372499 SPG7Q9UQ90 795 aa12.57□□□□□ -0.4
LRMDA-201ENST00000372499 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
LRMDA-201ENST00000372499 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
LRMDA-201ENST00000372499 MPRIPQ6WCQ1 1025 aa12.56□□□□□ -0.4
LRMDA-201ENST00000372499 PIGBQ92521 554 aa12.56□□□□□ -0.4
LRMDA-201ENST00000372499 SYT17Q9BSW7 474 aa12.56□□□□□ -0.4
LRMDA-201ENST00000372499 FHDC1Q9C0D6 1143 aaPredicted RBP12.56□□□□□ -0.4
LRMDA-201ENST00000372499 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
LRMDA-201ENST00000372499 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
LRMDA-201ENST00000372499 PHKG2P15735 406 aa12.55□□□□□ -0.4
LRMDA-201ENST00000372499 YY1P25490 414 aa12.55□□□□□ -0.4
LRMDA-201ENST00000372499 TAF1LQ8IZX4 1826 aa12.55□□□□□ -0.4
LRMDA-201ENST00000372499 C5P01031 1676 aa12.54□□□□□ -0.4
LRMDA-201ENST00000372499 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
LRMDA-201ENST00000372499 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
LRMDA-201ENST00000372499 ARXQ96QS3 562 aa12.54□□□□□ -0.4
LRMDA-201ENST00000372499 KNSTRNQ9Y448 316 aa12.54□□□□□ -0.4
LRMDA-201ENST00000372499 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
LRMDA-201ENST00000372499 COL23A1Q86Y22 540 aaPredicted RBP12.53□□□□□ -0.4
LRMDA-201ENST00000372499 IFNL2Q8IZJ0 200 aa12.53□□□□□ -0.4
LRMDA-201ENST00000372499 SMARCC1Q92922 1105 aaPredicted RBP12.53□□□□□ -0.4
LRMDA-201ENST00000372499 GOLGB1Q14789 3259 aaKnown RBP12.52□□□□□ -0.41
LRMDA-201ENST00000372499 AMIGO3Q86WK7 504 aa12.52□□□□□ -0.41
LRMDA-201ENST00000372499 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
LRMDA-201ENST00000372499 IL13P35225 146 aa12.51□□□□□ -0.41
LRMDA-201ENST00000372499 AEBP1Q8IUX7 1158 aa12.51□□□□□ -0.41
LRMDA-201ENST00000372499 CNKSR2Q8WXI2 1034 aa12.51□□□□□ -0.41
LRMDA-201ENST00000372499 ASAP1Q9ULH1 1129 aa12.51□□□□□ -0.41
LRMDA-201ENST00000372499 KDRP35968 1356 aa12.51□□□□□ -0.41
LRMDA-201ENST00000372499 LOC102724428A0A0B4J2F2 783 aa12.5□□□□□ -0.41
LRMDA-201ENST00000372499 HMGB2P26583 209 aaKnown RBP12.5□□□□□ -0.41
LRMDA-201ENST00000372499 SIK1P57059 783 aa12.5□□□□□ -0.41
LRMDA-201ENST00000372499 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
LRMDA-201ENST00000372499 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
LRMDA-201ENST00000372499 POLD1P28340 1107 aa12.49□□□□□ -0.41
LRMDA-201ENST00000372499 LINC00116Q8NCU8 138 aa12.49□□□□□ -0.41
LRMDA-201ENST00000372499 ATG3Q9NT62 314 aa12.49□□□□□ -0.41
LRMDA-201ENST00000372499 UBR3Q6ZT12 1888 aa12.48□□□□□ -0.41
LRMDA-201ENST00000372499 NPC1L1Q9UHC9 1359 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms