RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
VPS37B-202ENST00000371248 APAF1O14727 1248 aa23.29■■□□□ 1.32
VPS37B-202ENST00000371248 GLI3P10071 1580 aa23.29■■□□□ 1.32
VPS37B-202ENST00000371248 BARGINQ6ZT62 677 aa23.29■■□□□ 1.32
VPS37B-202ENST00000371248 FAM98CQ17RN3 349 aaKnown RBP23.28■■□□□ 1.32
VPS37B-202ENST00000371248 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
VPS37B-202ENST00000371248 PLEKHO1Q53GL0 409 aaPredicted RBP23.28■■□□□ 1.32
VPS37B-202ENST00000371248 DISP2A7MBM2 1401 aa23.27■■□□□ 1.32
VPS37B-202ENST00000371248 MTHFSDQ2M296 383 aaKnown RBP23.27■■□□□ 1.32
VPS37B-202ENST00000371248 OVOS2A0A0G2JMS6 1433 aa23.27■■□□□ 1.32
VPS37B-202ENST00000371248 AMOTQ4VCS5 1084 aa23.26■■□□□ 1.31
VPS37B-202ENST00000371248 CDCA7Q9BWT1 371 aaPredicted RBP23.26■■□□□ 1.31
VPS37B-202ENST00000371248 NEUROD2Q15784 382 aa23.26■■□□□ 1.31
VPS37B-202ENST00000371248 RRP7AQ9Y3A4 280 aaKnown RBP23.26■■□□□ 1.31
VPS37B-202ENST00000371248 DLG5Q8TDM6 1919 aa23.25■■□□□ 1.31
VPS37B-202ENST00000371248 PKD1L3Q7Z443 1732 aa23.25■■□□□ 1.31
VPS37B-202ENST00000371248 ZCRB1Q8TBF4 217 aaKnown RBP23.24■■□□□ 1.31
VPS37B-202ENST00000371248 SPG7Q9UQ90 795 aa23.24■■□□□ 1.31
VPS37B-202ENST00000371248 TMPOP42166 694 aaKnown RBP23.24■■□□□ 1.31
VPS37B-202ENST00000371248 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
VPS37B-202ENST00000371248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.24■■□□□ 1.31
VPS37B-202ENST00000371248 SALL2Q9Y467 1007 aaPredicted RBP23.24■■□□□ 1.31
VPS37B-202ENST00000371248 PLEKHG2Q9H7P9 1386 aa23.24■■□□□ 1.31
VPS37B-202ENST00000371248 HNRNPUQ00839 825 aaKnown RBP eCLIP23.23■■□□□ 1.31
VPS37B-202ENST00000371248 NFE2L2Q16236 605 aa23.23■■□□□ 1.31
VPS37B-202ENST00000371248 GAS2L2Q8NHY3 880 aa23.23■■□□□ 1.31
VPS37B-202ENST00000371248 A0A0G2JS52 829 aa23.23■■□□□ 1.31
VPS37B-202ENST00000371248 RIPK4P57078 832 aa23.22■■□□□ 1.31
VPS37B-202ENST00000371248 ZNF530Q6P9A1 599 aaPredicted RBP23.22■■□□□ 1.31
VPS37B-202ENST00000371248 EXOC5O00471 708 aa23.21■■□□□ 1.31
VPS37B-202ENST00000371248 RBM6P78332 1123 aaKnown RBP23.21■■□□□ 1.31
VPS37B-202ENST00000371248 SHANK3Q9BYB0 1731 aa23.21■■□□□ 1.31
VPS37B-202ENST00000371248 DDB1Q16531 1140 aa23.21■■□□□ 1.31
VPS37B-202ENST00000371248 ONECUT3O60422 494 aaPredicted RBP23.2■■□□□ 1.3
VPS37B-202ENST00000371248 POTEAQ6S8J7 498 aa23.2■■□□□ 1.3
VPS37B-202ENST00000371248 LRRC37A3O60309 1634 aa23.19■■□□□ 1.3
VPS37B-202ENST00000371248 THSD7AQ9UPZ6 1657 aa23.19■■□□□ 1.3
VPS37B-202ENST00000371248 DDX54Q8TDD1 881 aaKnown RBP23.19■■□□□ 1.3
VPS37B-202ENST00000371248 RXRBP28702 533 aa23.18■■□□□ 1.3
VPS37B-202ENST00000371248 C1orf141Q5JVX7 400 aa23.18■■□□□ 1.3
VPS37B-202ENST00000371248 PCDH11XQ9BZA7 1347 aa23.18■■□□□ 1.3
VPS37B-202ENST00000371248 PCDH11YQ9BZA8 1340 aa23.18■■□□□ 1.3
VPS37B-202ENST00000371248 CYP27B1O15528 508 aa23.18■■□□□ 1.3
VPS37B-202ENST00000371248 AKAP4Q5JQC9 854 aa23.17■■□□□ 1.3
VPS37B-202ENST00000371248 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
VPS37B-202ENST00000371248 TNS2Q63HR2 1409 aa23.17■■□□□ 1.3
VPS37B-202ENST00000371248 GNAT3A8MTJ3 354 aa23.17■■□□□ 1.3
VPS37B-202ENST00000371248 PHKG2P15735 406 aa23.17■■□□□ 1.3
VPS37B-202ENST00000371248 VIRMAQ69YN4 1812 aaKnown RBP23.16■■□□□ 1.3
VPS37B-202ENST00000371248 SEPT12Q8IYM1 358 aa23.16■■□□□ 1.3
VPS37B-202ENST00000371248 TRIM35Q9UPQ4 493 aa23.15■■□□□ 1.3
VPS37B-202ENST00000371248 MAP3K5Q99683 1374 aa23.15■■□□□ 1.3
VPS37B-202ENST00000371248 NGEFQ8N5V2 710 aa23.14■■□□□ 1.29
VPS37B-202ENST00000371248 RTF1Q92541 710 aaKnown RBP23.13■■□□□ 1.29
VPS37B-202ENST00000371248 LMOD3Q0VAK6 560 aa23.13■■□□□ 1.29
VPS37B-202ENST00000371248 DCTN1Q14203 1278 aa23.13■■□□□ 1.29
VPS37B-202ENST00000371248 NCBP3Q53F19 620 aaKnown RBP23.13■■□□□ 1.29
VPS37B-202ENST00000371248 MPRIPQ6WCQ1 1025 aa23.13■■□□□ 1.29
VPS37B-202ENST00000371248 PDE3BQ13370 1112 aa23.12■■□□□ 1.29
VPS37B-202ENST00000371248 CCDC27Q2M243 656 aa23.12■■□□□ 1.29
VPS37B-202ENST00000371248 MCM10Q7L590 875 aa23.12■■□□□ 1.29
VPS37B-202ENST00000371248 BRWD3Q6RI45 1802 aa23.12■■□□□ 1.29
VPS37B-202ENST00000371248 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
VPS37B-202ENST00000371248 WWC1Q8IX03 1113 aa23.12■■□□□ 1.29
VPS37B-202ENST00000371248 KAT6BQ8WYB5 2073 aa23.11■■□□□ 1.29
VPS37B-202ENST00000371248 MARCH10Q8NA82 808 aaPredicted RBP23.11■■□□□ 1.29
VPS37B-202ENST00000371248 LGR6Q9HBX8 967 aa23.1■■□□□ 1.29
VPS37B-202ENST00000371248 HSP90AB1P08238 724 aaKnown RBP23.1■■□□□ 1.29
VPS37B-202ENST00000371248 IL17REQ8NFR9 667 aa23.1■■□□□ 1.29
VPS37B-202ENST00000371248 THUMPD2Q9BTF0 503 aaKnown RBP23.1■■□□□ 1.29
VPS37B-202ENST00000371248 SCN11AQ9UI33 1791 aa23.1■■□□□ 1.29
VPS37B-202ENST00000371248 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
VPS37B-202ENST00000371248 RNMTO43148 476 aaKnown RBP23.08■■□□□ 1.29
VPS37B-202ENST00000371248 DCAF5Q96JK2 942 aa23.08■■□□□ 1.29
VPS37B-202ENST00000371248 ZBED9Q6R2W3 1325 aa23.08■■□□□ 1.28
VPS37B-202ENST00000371248 KDM6AO15550 1401 aaPredicted RBP23.07■■□□□ 1.28
VPS37B-202ENST00000371248 ZNF521Q96K83 1311 aa23.07■■□□□ 1.28
VPS37B-202ENST00000371248 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
VPS37B-202ENST00000371248 RGS12O14924 1447 aa23.05■■□□□ 1.28
VPS37B-202ENST00000371248 FAM182BQ5T319 152 aa23.05■■□□□ 1.28
VPS37B-202ENST00000371248 KRT27Q7Z3Y8 459 aa23.04■■□□□ 1.28
VPS37B-202ENST00000371248 CEMIPQ8WUJ3 1361 aa23.04■■□□□ 1.28
VPS37B-202ENST00000371248 WDR63Q8IWG1 891 aa23.04■■□□□ 1.28
VPS37B-202ENST00000371248 TOGARAM1Q9Y4F4 1720 aa23.03■■□□□ 1.28
VPS37B-202ENST00000371248 TEFQ10587 303 aa23.02■■□□□ 1.28
VPS37B-202ENST00000371248 DOT1LQ8TEK3 1739 aa23.01■■□□□ 1.27
VPS37B-202ENST00000371248 CALD1Q05682 793 aaKnown RBP23.01■■□□□ 1.27
VPS37B-202ENST00000371248 GOLGA2Q08379 1002 aa23.01■■□□□ 1.27
VPS37B-202ENST00000371248 ITGB4P16144 1822 aa23.01■■□□□ 1.27
VPS37B-202ENST00000371248 LAS1LQ9Y4W2 734 aaKnown RBP23.01■■□□□ 1.27
VPS37B-202ENST00000371248 ERVV-2B6SEH9 535 aa23■■□□□ 1.27
VPS37B-202ENST00000371248 CABP4P57796 275 aa23■■□□□ 1.27
VPS37B-202ENST00000371248 NFATC2IPQ8NCF5 419 aa23■■□□□ 1.27
VPS37B-202ENST00000371248 SLC52A2Q9HAB3 445 aa23■■□□□ 1.27
VPS37B-202ENST00000371248 CDCA7LQ96GN5 454 aa22.99■■□□□ 1.27
VPS37B-202ENST00000371248 ACSBG1Q96GR2 724 aa22.99■■□□□ 1.27
VPS37B-202ENST00000371248 SIPA1L3O60292 1781 aaPredicted RBP22.99■■□□□ 1.27
VPS37B-202ENST00000371248 SPINK5Q9NQ38 1064 aaPredicted RBP22.99■■□□□ 1.27
VPS37B-202ENST00000371248 TAF7Q15545 349 aaPredicted RBP22.98■■□□□ 1.27
VPS37B-202ENST00000371248 IL16Q14005 1332 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms