RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 POLR3GO15318 223 aaPredicted RBP21.2■□□□□ 0.98
CHRNA4-201ENST00000370263 GIMAP7Q8NHV1 300 aa21.2■□□□□ 0.98
CHRNA4-201ENST00000370263 SHTN1A0MZ66 631 aa21.19■□□□□ 0.98
CHRNA4-201ENST00000370263 TRIM22Q8IYM9 498 aa21.19■□□□□ 0.98
CHRNA4-201ENST00000370263 PRXQ9BXM0 1461 aa21.19■□□□□ 0.98
CHRNA4-201ENST00000370263 CENPHQ9H3R5 247 aa21.19■□□□□ 0.98
CHRNA4-201ENST00000370263 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
CHRNA4-201ENST00000370263 DHX29Q7Z478 1369 aaKnown RBP21.19■□□□□ 0.98
CHRNA4-201ENST00000370263 GTF2F1P35269 517 aaKnown RBP eCLIP21.19■□□□□ 0.98
CHRNA4-201ENST00000370263 TRERF1Q96PN7 1200 aa21.19■□□□□ 0.98
CHRNA4-201ENST00000370263 SSH1Q8WYL5 1049 aa21.19■□□□□ 0.98
CHRNA4-201ENST00000370263 CCDC148Q8NFR7 591 aa21.18■□□□□ 0.98
CHRNA4-201ENST00000370263 TRIM34Q9BYJ4 488 aa21.18■□□□□ 0.98
CHRNA4-201ENST00000370263 IL1RAPL2Q9NP60 686 aa21.18■□□□□ 0.98
CHRNA4-201ENST00000370263 LRRFIP2Q9Y608 721 aaKnown RBP21.18■□□□□ 0.98
CHRNA4-201ENST00000370263 FCHSD2O94868 740 aa21.18■□□□□ 0.98
CHRNA4-201ENST00000370263 ALDH1L2Q3SY69 923 aa21.18■□□□□ 0.98
CHRNA4-201ENST00000370263 SH2B1Q9NRF2 756 aaPredicted RBP21.18■□□□□ 0.98
CHRNA4-201ENST00000370263 EFCAB5A4FU69 1503 aa21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 SRGAP3O43295 1099 aa21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 CASQ1P31415 396 aa21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 LRSAM1Q6UWE0 723 aa21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 RAPGEF4Q8WZA2 1011 aa21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 MX1P20591 662 aa21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 BMP2KLQ5H9B9 411 aa21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 ANKRD30BQ9BXX2 1392 aa21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 BMS1Q14692 1282 aaKnown RBP21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 TIGD1Q96MW7 591 aa21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 PAXBP1Q9Y5B6 917 aa21.17■□□□□ 0.98
CHRNA4-201ENST00000370263 SULT6B1Q6IMI4 303 aa21.16■□□□□ 0.98
CHRNA4-201ENST00000370263 CCDC43Q96MW1 224 aaKnown RBP21.16■□□□□ 0.98
CHRNA4-201ENST00000370263 IGHDP01880 384 aa21.16■□□□□ 0.98
CHRNA4-201ENST00000370263 CDKL5O76039 1030 aa21.16■□□□□ 0.98
CHRNA4-201ENST00000370263 MAP9Q49MG5 647 aa21.16■□□□□ 0.98
CHRNA4-201ENST00000370263 AACSQ86V21 672 aa21.16■□□□□ 0.98
CHRNA4-201ENST00000370263 CDK5RAP3Q96JB5 506 aa21.16■□□□□ 0.98
CHRNA4-201ENST00000370263 RBM27Q9P2N5 1060 aaKnown RBP21.16■□□□□ 0.98
CHRNA4-201ENST00000370263 JAKMIP3Q5VZ66 844 aa21.16■□□□□ 0.98
CHRNA4-201ENST00000370263 CTAGE5O15320 804 aa21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 ZRSR2Q15696 482 aaKnown RBP21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 ZFYVE27Q5T4F4 411 aa21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 FAM107BQ9H098 131 aa21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 GSDMDP57764 484 aa21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 TRMT1Q9NXH9 659 aaKnown RBP21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 C9orf84Q5VXU9 1444 aa21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 FYB1O15117 783 aa21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 PSME1Q06323 249 aa21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 DDX19AQ9NUU7 478 aaKnown RBP21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 EXOC6BQ9Y2D4 811 aa21.15■□□□□ 0.98
CHRNA4-201ENST00000370263 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
CHRNA4-201ENST00000370263 PRDM2Q13029 1718 aa21.14■□□□□ 0.98
CHRNA4-201ENST00000370263 CCAR1Q8IX12 1150 aaKnown RBP21.14■□□□□ 0.98
CHRNA4-201ENST00000370263 KIF5CO60282 957 aa21.14■□□□□ 0.97
CHRNA4-201ENST00000370263 CCDC158Q5M9N0 1113 aa21.14■□□□□ 0.97
CHRNA4-201ENST00000370263 DDX11Q96FC9 970 aa21.14■□□□□ 0.97
CHRNA4-201ENST00000370263 TBC1D9Q6ZT07 1266 aa21.14■□□□□ 0.97
CHRNA4-201ENST00000370263 ZKSCAN5Q9Y2L8 839 aa21.13■□□□□ 0.97
CHRNA4-201ENST00000370263 MCM3P25205 808 aa21.13■□□□□ 0.97
CHRNA4-201ENST00000370263 KRT222Q8N1A0 295 aa21.13■□□□□ 0.97
CHRNA4-201ENST00000370263 NFE2L2Q16236 605 aa21.13■□□□□ 0.97
CHRNA4-201ENST00000370263 CKAP2LQ8IYA6 745 aa21.13■□□□□ 0.97
CHRNA4-201ENST00000370263 NOLC1Q14978 699 aaKnown RBP eCLIP21.13■□□□□ 0.97
CHRNA4-201ENST00000370263 LIMCH1Q9UPQ0 1083 aa21.13■□□□□ 0.97
CHRNA4-201ENST00000370263 DAPK1P53355 1430 aa21.13■□□□□ 0.97
CHRNA4-201ENST00000370263 KIAA1328Q86T90 577 aa21.13■□□□□ 0.97
CHRNA4-201ENST00000370263 SIL1Q9H173 461 aa21.13■□□□□ 0.97
CHRNA4-201ENST00000370263 NLRP6P59044 892 aa21.12■□□□□ 0.97
CHRNA4-201ENST00000370263 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.12■□□□□ 0.97
CHRNA4-201ENST00000370263 GPRASP1Q5JY77 1395 aa21.12■□□□□ 0.97
CHRNA4-201ENST00000370263 SMARCA5O60264 1052 aaPredicted RBP21.12■□□□□ 0.97
CHRNA4-201ENST00000370263 TOP1P11387 765 aaKnown RBP21.12■□□□□ 0.97
CHRNA4-201ENST00000370263 GDPD2Q9HCC8 539 aa21.12■□□□□ 0.97
CHRNA4-201ENST00000370263 KIF4BQ2VIQ3 1234 aa21.12■□□□□ 0.97
CHRNA4-201ENST00000370263 TTC39AQ5SRH9 613 aa21.11■□□□□ 0.97
CHRNA4-201ENST00000370263 NUTM1Q86Y26 1132 aa21.11■□□□□ 0.97
CHRNA4-201ENST00000370263 HS1BP3Q53T59 392 aa21.11■□□□□ 0.97
CHRNA4-201ENST00000370263 CEP135Q66GS9 1140 aa21.11■□□□□ 0.97
CHRNA4-201ENST00000370263 ABCC11Q96J66 1382 aa21.11■□□□□ 0.97
CHRNA4-201ENST00000370263 CTNNA3Q9UI47 895 aa21.11■□□□□ 0.97
CHRNA4-201ENST00000370263 NOL7Q9UMY1 257 aaKnown RBP21.11■□□□□ 0.97
CHRNA4-201ENST00000370263 C8orf34Q49A92 452 aa21.1■□□□□ 0.97
CHRNA4-201ENST00000370263 PRPF40BQ6NWY9 871 aaKnown RBP21.1■□□□□ 0.97
CHRNA4-201ENST00000370263 GTPBP4Q9BZE4 634 aaKnown RBP21.1■□□□□ 0.97
CHRNA4-201ENST00000370263 INCENPQ9NQS7 918 aa21.1■□□□□ 0.97
CHRNA4-201ENST00000370263 CCDC69A6NI79 296 aa21.1■□□□□ 0.97
CHRNA4-201ENST00000370263 UBE2HP62256 183 aa21.1■□□□□ 0.97
CHRNA4-201ENST00000370263 PRAM1Q96QH2 718 aa21.1■□□□□ 0.97
CHRNA4-201ENST00000370263 EVA1CP58658 441 aa21.1■□□□□ 0.97
CHRNA4-201ENST00000370263 POTEB2H3BUK9 544 aa21.09■□□□□ 0.97
CHRNA4-201ENST00000370263 GLRX3O76003 335 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-201ENST00000370263 TAX1BP1Q86VP1 789 aa21.09■□□□□ 0.97
CHRNA4-201ENST00000370263 NSD3Q9BZ95 1437 aa21.09■□□□□ 0.97
CHRNA4-201ENST00000370263 SNW1Q13573 536 aaKnown RBP21.09■□□□□ 0.97
CHRNA4-201ENST00000370263 STK11IPQ8N1F8 1099 aa21.09■□□□□ 0.97
CHRNA4-201ENST00000370263 TRIM27P14373 513 aa21.09■□□□□ 0.97
CHRNA4-201ENST00000370263 KIF1BPQ96EK5 621 aa21.09■□□□□ 0.97
CHRNA4-201ENST00000370263 CAVIN2O95810 425 aa21.08■□□□□ 0.97
CHRNA4-201ENST00000370263 NEFHP12036 1026 aa21.08■□□□□ 0.97
CHRNA4-201ENST00000370263 PLEKHO1Q53GL0 409 aaPredicted RBP21.08■□□□□ 0.97
CHRNA4-201ENST00000370263 RAB11FIP3O75154 756 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms