RNA–Protein interactions for RNA: ENST00000370137.5

LRRC39-202, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC39, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-202ENST00000370137 HMGB1P1B2RPK0 211 aaPredicted RBP8.64□□□□□ -1.03
LRRC39-202ENST00000370137 F12P00748 615 aaPredicted RBP8.64□□□□□ -1.03
LRRC39-202ENST00000370137 AVPP01185 164 aa8.64□□□□□ -1.03
LRRC39-202ENST00000370137 RTL5Q5HYW3 569 aaPredicted RBP8.64□□□□□ -1.03
LRRC39-202ENST00000370137 CFAP70Q5T0N1 1121 aa8.64□□□□□ -1.03
LRRC39-202ENST00000370137 VTI1AQ96AJ9 217 aa8.64□□□□□ -1.03
LRRC39-202ENST00000370137 GPATCH3Q96I76 525 aa8.64□□□□□ -1.03
LRRC39-202ENST00000370137 TMA7Q9Y2S6 64 aaKnown RBP8.64□□□□□ -1.03
LRRC39-202ENST00000370137 SBNO2Q9Y2G9 1366 aa8.64□□□□□ -1.03
LRRC39-202ENST00000370137 TTC24A2A3L6 582 aaPredicted RBP8.63□□□□□ -1.03
LRRC39-202ENST00000370137 TMEM88BA6NKF7 163 aa8.63□□□□□ -1.03
LRRC39-202ENST00000370137 NUTM2BA6NNL0 878 aaPredicted RBP8.63□□□□□ -1.03
LRRC39-202ENST00000370137 NUTM2EB1AL46 878 aaPredicted RBP8.63□□□□□ -1.03
LRRC39-202ENST00000370137 SMPD1P17405 629 aa8.63□□□□□ -1.03
LRRC39-202ENST00000370137 SH3BP2P78314 561 aa8.63□□□□□ -1.03
LRRC39-202ENST00000370137 NUTM2DQ5VT03 806 aaPredicted RBP8.63□□□□□ -1.03
LRRC39-202ENST00000370137 NOP9Q86U38 636 aaKnown RBP8.63□□□□□ -1.03
LRRC39-202ENST00000370137 NUTM2AQ8IVF1 878 aaPredicted RBP8.63□□□□□ -1.03
LRRC39-202ENST00000370137 PER1O15534 1290 aaPredicted RBP8.62□□□□□ -1.03
LRRC39-202ENST00000370137 NOM1Q5C9Z4 860 aaKnown RBP8.62□□□□□ -1.03
LRRC39-202ENST00000370137 FAM9BQ8IZU0 186 aa8.62□□□□□ -1.03
LRRC39-202ENST00000370137 SIAH2O43255 324 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 ABL2P42684 1182 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 CRIPAKQ8N1N5 446 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 BAP1Q92560 729 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 UBA5Q9GZZ9 404 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 AAASQ9NRG9 546 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 MAGEC2Q9UBF1 373 aaPredicted RBP8.61□□□□□ -1.03
LRRC39-202ENST00000370137 J3QL48 77 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 CTHP32929 405 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 IGBP1P78318 339 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 LINC01559Q495D7 138 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 BANK1Q8NDB2 785 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 MAP10Q9P2G4 905 aa8.61□□□□□ -1.03
LRRC39-202ENST00000370137 hCG_2014768A0A024R1R8 64 aa8.6□□□□□ -1.03
LRRC39-202ENST00000370137 ST8SIA5O15466 376 aa8.6□□□□□ -1.03
LRRC39-202ENST00000370137 PARNO95453 639 aaKnown RBP8.6□□□□□ -1.03
LRRC39-202ENST00000370137 VAMP1P23763 118 aa8.6□□□□□ -1.03
LRRC39-202ENST00000370137 OS9Q13438 667 aaPredicted RBP8.6□□□□□ -1.03
LRRC39-202ENST00000370137 SMC5Q8IY18 1101 aa8.6□□□□□ -1.03
LRRC39-202ENST00000370137 LARGE2Q8N3Y3 721 aa8.6□□□□□ -1.03
LRRC39-202ENST00000370137 TSC1Q92574 1164 aa8.6□□□□□ -1.03
LRRC39-202ENST00000370137 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
LRRC39-202ENST00000370137 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.03
LRRC39-202ENST00000370137 FBXO31Q5XUX0 539 aaPredicted RBP8.59□□□□□ -1.03
LRRC39-202ENST00000370137 FAM43BQ6ZT52 329 aaPredicted RBP8.59□□□□□ -1.03
LRRC39-202ENST00000370137 NME8Q8N427 588 aa8.59□□□□□ -1.03
LRRC39-202ENST00000370137 ZNF511Q8NB15 262 aa8.59□□□□□ -1.03
LRRC39-202ENST00000370137 EHBP1Q8NDI1 1231 aa8.59□□□□□ -1.03
LRRC39-202ENST00000370137 CCER1Q8TC90 406 aaPredicted RBP8.59□□□□□ -1.03
LRRC39-202ENST00000370137 CTC1Q2NKJ3 1217 aa8.58□□□□□ -1.04
LRRC39-202ENST00000370137 ZNF787Q6DD87 383 aa8.58□□□□□ -1.04
LRRC39-202ENST00000370137 B4GALNT3Q6L9W6 998 aa8.58□□□□□ -1.04
LRRC39-202ENST00000370137 HELBQ8NG08 1087 aaPredicted RBP8.58□□□□□ -1.04
LRRC39-202ENST00000370137 EVI5LQ96CN4 794 aa8.58□□□□□ -1.04
LRRC39-202ENST00000370137 LNPKQ9C0E8 428 aa8.58□□□□□ -1.04
LRRC39-202ENST00000370137 TLDC2A0PJX2 215 aa8.57□□□□□ -1.04
LRRC39-202ENST00000370137 RECKO95980 971 aa8.57□□□□□ -1.04
LRRC39-202ENST00000370137 PTPROQ16827 1216 aa8.57□□□□□ -1.04
LRRC39-202ENST00000370137 PPP2R2DQ66LE6 453 aa8.57□□□□□ -1.04
LRRC39-202ENST00000370137 CCDC194A0A1B0GVG4 234 aa8.56□□□□□ -1.04
LRRC39-202ENST00000370137 CREB3O43889 395 aa8.56□□□□□ -1.04
LRRC39-202ENST00000370137 PPFIA4O75335 1185 aa8.56□□□□□ -1.04
LRRC39-202ENST00000370137 ERCC5P28715 1186 aaPredicted RBP8.56□□□□□ -1.04
LRRC39-202ENST00000370137 LONRF3Q496Y0 759 aa8.56□□□□□ -1.04
LRRC39-202ENST00000370137 HDGFL1Q5TGJ6 251 aa8.56□□□□□ -1.04
LRRC39-202ENST00000370137 AXIN1O15169 862 aa8.55□□□□□ -1.04
LRRC39-202ENST00000370137 ALDH1A1P00352 501 aa8.55□□□□□ -1.04
LRRC39-202ENST00000370137 VARSP26640 1264 aaKnown RBP8.55□□□□□ -1.04
LRRC39-202ENST00000370137 CTDSPL2Q05D32 466 aa8.55□□□□□ -1.04
LRRC39-202ENST00000370137 PSME1Q06323 249 aa8.55□□□□□ -1.04
LRRC39-202ENST00000370137 NPAS4Q8IUM7 802 aa8.55□□□□□ -1.04
LRRC39-202ENST00000370137 HPS1Q92902 700 aa8.55□□□□□ -1.04
LRRC39-202ENST00000370137 DACH1Q9UI36 760 aa8.55□□□□□ -1.04
LRRC39-202ENST00000370137 POTECB2RU33 542 aa8.54□□□□□ -1.04
LRRC39-202ENST00000370137 EIF3JO75822 258 aaKnown RBP8.54□□□□□ -1.04
LRRC39-202ENST00000370137 RFC5P40937 340 aa8.54□□□□□ -1.04
LRRC39-202ENST00000370137 HSP90AB2PQ58FF8 381 aa8.54□□□□□ -1.04
LRRC39-202ENST00000370137 EGFLAMQ63HQ2 1017 aa8.54□□□□□ -1.04
LRRC39-202ENST00000370137 MTMR14Q8NCE2 650 aa8.54□□□□□ -1.04
LRRC39-202ENST00000370137 PMM1Q92871 262 aa8.54□□□□□ -1.04
LRRC39-202ENST00000370137 MARSP56192 900 aaKnown RBP8.53□□□□□ -1.04
LRRC39-202ENST00000370137 SDE2Q6IQ49 451 aa8.53□□□□□ -1.04
LRRC39-202ENST00000370137 MPNDQ8N594 471 aa8.53□□□□□ -1.04
LRRC39-202ENST00000370137 ADAMTS19Q8TE59 1207 aa8.53□□□□□ -1.04
LRRC39-202ENST00000370137 FOXJ1Q92949 421 aa8.53□□□□□ -1.04
LRRC39-202ENST00000370137 KCNB2Q92953 911 aa8.53□□□□□ -1.04
LRRC39-202ENST00000370137 SPACA7Q96KW9 195 aa8.53□□□□□ -1.04
LRRC39-202ENST00000370137 PPP1R12CQ9BZL4 782 aa8.53□□□□□ -1.04
LRRC39-202ENST00000370137 SH3BP5O60239 455 aa8.52□□□□□ -1.05
LRRC39-202ENST00000370137 NEFMP07197 916 aa8.52□□□□□ -1.05
LRRC39-202ENST00000370137 CDCA8Q53HL2 280 aa8.52□□□□□ -1.05
LRRC39-202ENST00000370137 SPOCK3Q9BQ16 436 aa8.52□□□□□ -1.05
LRRC39-202ENST00000370137 TANGO6Q9C0B7 1094 aa8.52□□□□□ -1.05
LRRC39-202ENST00000370137 FAN1Q9Y2M0 1017 aa8.52□□□□□ -1.05
LRRC39-202ENST00000370137 ATG7O95352 703 aa8.51□□□□□ -1.05
LRRC39-202ENST00000370137 IBSPP21815 317 aaPredicted RBP8.51□□□□□ -1.05
LRRC39-202ENST00000370137 FOXD4Q12950 439 aaPredicted RBP8.51□□□□□ -1.05
LRRC39-202ENST00000370137 ARMC2Q8NEN0 867 aa8.51□□□□□ -1.05
LRRC39-202ENST00000370137 CUEDC1Q9NWM3 386 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms