RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 KIAA0754O94854 1291 aa13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 ADCY5O95622 1261 aa13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 ISM2Q6H9L7 571 aa13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 IPO4Q8TEX9 1081 aaKnown RBP13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 CCDC47Q96A33 483 aaKnown RBP13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 ZSWIM4Q9H7M6 989 aa13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 MAGEC2Q9UBF1 373 aaPredicted RBP13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 FAM135AQ9P2D6 1515 aa13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 CABP1Q9NZU7 370 aa13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 KLHL10Q6JEL2 608 aa13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 NOL10Q9BSC4 688 aaKnown RBP13.64□□□□□ -0.23
PLXNA3-201ENST00000369682 PDCP20941 246 aa13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 TTC39AQ5SRH9 613 aa13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 TNNT1P13805 278 aa13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 ZHX3Q9H4I2 956 aa13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 NKTRP30414 1462 aaKnown RBP13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 F6X3S4 739 aa13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 MEX3CQ5U5Q3 659 aaKnown RBP13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 TAX1BP1Q86VP1 789 aa13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 ITSN2Q9NZM3 1697 aa13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 RARSP54136 660 aaKnown RBP13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 CCDC183Q5T5S1 534 aa13.63□□□□□ -0.23
PLXNA3-201ENST00000369682 TNNQ9UQP3 1299 aa13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 HDGFL1Q5TGJ6 251 aa13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 CYB5RLQ6IPT4 315 aa13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 CCDC30Q5VVM6 783 aa13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 ENOX2Q16206 610 aaKnown RBP13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 LRRFIP1Q32MZ4 808 aaKnown RBP13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 TFIP11Q9UBB9 837 aaKnown RBP13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 C17orf53Q8N3J3 647 aaPredicted RBP13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 CDK19Q9BWU1 502 aa13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 HSP90AB4PQ58FF6 505 aa13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 CIZ1Q9ULV3 898 aaPredicted RBP13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 SEC24BO95487 1268 aa13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 TMX4Q9H1E5 349 aaPredicted RBP13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 GNAI3P08754 354 aa13.62□□□□□ -0.23
PLXNA3-201ENST00000369682 CCDC191Q8NCU4 936 aa13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 FKBP4Q02790 459 aaKnown RBP eCLIP13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 SPG7Q9UQ90 795 aa13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 ODF2Q5BJF6 829 aa13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 AFAP1Q8N556 730 aa13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 RRAGDQ9NQL2 400 aaPredicted RBP13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 RAI14Q9P0K7 980 aa13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 NLRP6P59044 892 aa13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 SRGAP3O43295 1099 aa13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 AAMPQ13685 434 aa13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 SEPT11Q9NVA2 429 aaKnown RBP13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 ATP2B2Q01814 1243 aa13.61□□□□□ -0.23
PLXNA3-201ENST00000369682 DTNBO60941 627 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 ARHGEF11O15085 1522 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 CFAP100Q494V2 611 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 GIMAP6Q6P9H5 292 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 SCAPERQ9BY12 1400 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 CEP57L1Q8IYX8 460 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 CNPY2Q9Y2B0 182 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 CFAP43Q8NDM7 1665 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 NAIPQ13075 1403 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 CCP110O43303 1012 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 HSP90AA4PQ58FG1 418 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 SMARCE1Q969G3 411 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 FILIP1LQ4L180 1135 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 TXNDC2Q86VQ3 553 aa13.6□□□□□ -0.23
PLXNA3-201ENST00000369682 TICAM2Q86XR7 235 aa13.59□□□□□ -0.23
PLXNA3-201ENST00000369682 CPLX3Q8WVH0 158 aa13.59□□□□□ -0.23
PLXNA3-201ENST00000369682 MCM2P49736 904 aa13.59□□□□□ -0.23
PLXNA3-201ENST00000369682 BLOC1S2Q6QNY1 142 aa13.59□□□□□ -0.23
PLXNA3-201ENST00000369682 WDR63Q8IWG1 891 aa13.59□□□□□ -0.23
PLXNA3-201ENST00000369682 CCDC43Q96MW1 224 aaKnown RBP13.59□□□□□ -0.23
PLXNA3-201ENST00000369682 BRMS1Q9HCU9 246 aa13.59□□□□□ -0.23
PLXNA3-201ENST00000369682 UBXN4Q92575 508 aa13.59□□□□□ -0.23
PLXNA3-201ENST00000369682 DEF6Q9H4E7 631 aa13.59□□□□□ -0.23
PLXNA3-201ENST00000369682 FBLN1P23142 703 aa13.58□□□□□ -0.23
PLXNA3-201ENST00000369682 CCT2P78371 535 aaKnown RBP13.58□□□□□ -0.23
PLXNA3-201ENST00000369682 KIAA1328Q86T90 577 aa13.58□□□□□ -0.23
PLXNA3-201ENST00000369682 ERCC4Q92889 916 aaPredicted RBP13.58□□□□□ -0.23
PLXNA3-201ENST00000369682 TROQ12816 1431 aaPredicted RBP13.58□□□□□ -0.24
PLXNA3-201ENST00000369682 FAM107BQ9H098 131 aa13.58□□□□□ -0.24
PLXNA3-201ENST00000369682 URI1O94763 535 aaPredicted RBP13.58□□□□□ -0.24
PLXNA3-201ENST00000369682 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.24
PLXNA3-201ENST00000369682 TBC1D32Q96NH3 1257 aa13.58□□□□□ -0.24
PLXNA3-201ENST00000369682 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.58□□□□□ -0.245e-7■■■■■ 77.7
PLXNA3-201ENST00000369682 SSBP05455 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
PLXNA3-201ENST00000369682 TRIM27P14373 513 aa13.58□□□□□ -0.24
PLXNA3-201ENST00000369682 TMC6Q7Z403 805 aa13.58□□□□□ -0.24
PLXNA3-201ENST00000369682 CDK5RAP3Q96JB5 506 aa13.58□□□□□ -0.24
PLXNA3-201ENST00000369682 TANGO6Q9C0B7 1094 aa13.58□□□□□ -0.24
PLXNA3-201ENST00000369682 RNF187Q5TA31 235 aaPredicted RBP13.57□□□□□ -0.24
PLXNA3-201ENST00000369682 PLCD3Q8N3E9 789 aa13.57□□□□□ -0.24
PLXNA3-201ENST00000369682 ABTB2Q8N961 1025 aa13.57□□□□□ -0.24
PLXNA3-201ENST00000369682 PDCL3Q9H2J4 239 aa13.57□□□□□ -0.24
PLXNA3-201ENST00000369682 DISP3Q9P2K9 1392 aa13.57□□□□□ -0.24
PLXNA3-201ENST00000369682 CASQ1P31415 396 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms