RNA–Protein interactions for RNA: ENST00000369487.3

CD58-201, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 892 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-201ENST00000369487 PPP2R1AP30153 589 aa27.92■■■□□ 2.06
CD58-201ENST00000369487 BAG6P46379 1132 aa27.92■■■□□ 2.06
CD58-201ENST00000369487 DDX54Q8TDD1 881 aaKnown RBP27.92■■■□□ 2.06
CD58-201ENST00000369487 DIAPH1O60610 1272 aaKnown RBP27.91■■■□□ 2.06
CD58-201ENST00000369487 CFAP53Q96M91 514 aa27.91■■■□□ 2.06
CD58-201ENST00000369487 SHANK3Q9BYB0 1731 aa27.91■■■□□ 2.06
CD58-201ENST00000369487 PCDH11XQ9BZA7 1347 aa27.91■■■□□ 2.06
CD58-201ENST00000369487 PCDH11YQ9BZA8 1340 aa27.91■■■□□ 2.06
CD58-201ENST00000369487 SBF2Q86WG5 1849 aa27.9■■■□□ 2.06
CD58-201ENST00000369487 PKD1L3Q7Z443 1732 aa27.89■■■□□ 2.06
CD58-201ENST00000369487 COL3A1P02461 1466 aaPredicted RBP27.89■■■□□ 2.06
CD58-201ENST00000369487 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.89■■■□□ 2.06
CD58-201ENST00000369487 SPG7Q9UQ90 795 aa27.88■■■□□ 2.05
CD58-201ENST00000369487 KDRP35968 1356 aa27.87■■■□□ 2.05
CD58-201ENST00000369487 RALBP1Q15311 655 aa27.87■■■□□ 2.05
CD58-201ENST00000369487 DEFB132Q7Z7B7 95 aa27.87■■■□□ 2.05
CD58-201ENST00000369487 BCL11BQ9C0K0 894 aaPredicted RBP27.87■■■□□ 2.05
CD58-201ENST00000369487 APBA3O96018 575 aa27.86■■■□□ 2.05
CD58-201ENST00000369487 SULT6B1Q6IMI4 303 aa27.85■■■□□ 2.05
CD58-201ENST00000369487 NHSQ6T4R5 1651 aa27.84■■■□□ 2.05
CD58-201ENST00000369487 AEBP1Q8IUX7 1158 aa27.83■■■□□ 2.05
CD58-201ENST00000369487 ACSBG1Q96GR2 724 aa27.81■■■□□ 2.04
CD58-201ENST00000369487 CYP27B1O15528 508 aa27.8■■■□□ 2.04
CD58-201ENST00000369487 EN1Q05925 392 aaPredicted RBP27.8■■■□□ 2.04
CD58-201ENST00000369487 AMOTQ4VCS5 1084 aa27.8■■■□□ 2.04
CD58-201ENST00000369487 PLEKHO1Q53GL0 409 aaPredicted RBP27.8■■■□□ 2.04
CD58-201ENST00000369487 NUDCQ9Y266 331 aa27.79■■■□□ 2.04
CD58-201ENST00000369487 U2SURPO15042 1029 aaKnown RBP27.78■■■□□ 2.04
CD58-201ENST00000369487 KCNQ2O43526 872 aa27.78■■■□□ 2.04
CD58-201ENST00000369487 DOT1LQ8TEK3 1739 aa27.78■■■□□ 2.04
CD58-201ENST00000369487 PTF1AQ7RTS3 328 aa27.77■■■□□ 2.04
CD58-201ENST00000369487 IFNL2Q8IZJ0 200 aa27.77■■■□□ 2.04
CD58-201ENST00000369487 CAMKK2Q96RR4 588 aa27.77■■■□□ 2.04
CD58-201ENST00000369487 RGPD3A6NKT7 1758 aaPredicted RBP27.77■■■□□ 2.04
CD58-201ENST00000369487 RGPD4Q7Z3J3 1758 aa27.77■■■□□ 2.04
CD58-201ENST00000369487 PLSCR1O15162 318 aa27.76■■■□□ 2.03
CD58-201ENST00000369487 HMOX1P09601 288 aa27.76■■■□□ 2.03
CD58-201ENST00000369487 MYBBP1AQ9BQG0 1328 aaKnown RBP27.75■■■□□ 2.03
CD58-201ENST00000369487 NKX1-1Q15270 411 aaPredicted RBP27.75■■■□□ 2.03
CD58-201ENST00000369487 EZH2Q15910 746 aaKnown RBP27.75■■■□□ 2.03
CD58-201ENST00000369487 KAT6BQ8WYB5 2073 aa27.75■■■□□ 2.03
CD58-201ENST00000369487 PHKG2P15735 406 aa27.74■■■□□ 2.03
CD58-201ENST00000369487 SYTL4Q96C24 671 aaPredicted RBP27.73■■■□□ 2.03
CD58-201ENST00000369487 BTAF1O14981 1849 aa27.72■■■□□ 2.03
CD58-201ENST00000369487 PRIM1P49642 420 aaKnown RBP27.72■■■□□ 2.03
CD58-201ENST00000369487 ZNF530Q6P9A1 599 aaPredicted RBP27.72■■■□□ 2.03
CD58-201ENST00000369487 HSP90AB1P08238 724 aaKnown RBP27.71■■■□□ 2.03
CD58-201ENST00000369487 PRKRIP1Q9H875 184 aaPredicted RBP27.71■■■□□ 2.03
CD58-201ENST00000369487 RREB1Q92766 1687 aa27.7■■■□□ 2.02
CD58-201ENST00000369487 C1orf141Q5JVX7 400 aa27.69■■■□□ 2.02
CD58-201ENST00000369487 U2AF1L5P0DN76 240 aaPredicted RBP27.68■■■□□ 2.02
CD58-201ENST00000369487 U2AF1Q01081 240 aaKnown RBP eCLIP27.68■■■□□ 2.02
CD58-201ENST00000369487 TOGARAM1Q9Y4F4 1720 aa27.67■■■□□ 2.02
CD58-201ENST00000369487 DCAF5Q96JK2 942 aa27.66■■■□□ 2.02
CD58-201ENST00000369487 RSPH6AQ9H0K4 717 aa27.64■■■□□ 2.02
CD58-201ENST00000369487 NUP188Q5SRE5 1749 aa27.64■■■□□ 2.01
CD58-201ENST00000369487 FCHSD2O94868 740 aa27.63■■■□□ 2.01
CD58-201ENST00000369487 AKAP4Q5JQC9 854 aa27.63■■■□□ 2.01
CD58-201ENST00000369487 MPRIPQ6WCQ1 1025 aa27.63■■■□□ 2.01
CD58-201ENST00000369487 ITGB4P16144 1822 aa27.62■■■□□ 2.01
CD58-201ENST00000369487 PRKAR2BP31323 418 aa27.62■■■□□ 2.01
CD58-201ENST00000369487 TXNRD1Q16881 649 aa27.62■■■□□ 2.01
CD58-201ENST00000369487 ERVV-2B6SEH9 535 aa27.61■■■□□ 2.01
CD58-201ENST00000369487 MTHFSDQ2M296 383 aaKnown RBP27.61■■■□□ 2.01
CD58-201ENST00000369487 GAS2L2Q8NHY3 880 aa27.61■■■□□ 2.01
CD58-201ENST00000369487 TMOD3Q9NYL9 352 aa27.61■■■□□ 2.01
CD58-201ENST00000369487 KDM6AO15550 1401 aaPredicted RBP27.6■■■□□ 2.01
CD58-201ENST00000369487 NBPF14Q5TI25 921 aa27.59■■■□□ 2.01
CD58-201ENST00000369487 PROM2Q8N271 834 aa27.59■■■□□ 2.01
CD58-201ENST00000369487 PIGBQ92521 554 aa27.58■■■□□ 2.01
CD58-201ENST00000369487 SLC27A3Q5K4L6 730 aa27.57■■■□□ 2
CD58-201ENST00000369487 SMARCC1Q92922 1105 aaPredicted RBP27.56■■■□□ 2
CD58-201ENST00000369487 PNNQ9H307 717 aaKnown RBP27.56■■■□□ 2
CD58-201ENST00000369487 LY75O60449 1722 aa27.55■■■□□ 2
CD58-201ENST00000369487 ANP32CO43423 234 aa27.55■■■□□ 2
CD58-201ENST00000369487 NEFMP07197 916 aa27.55■■■□□ 2
CD58-201ENST00000369487 CABP4P57796 275 aa27.54■■■□□ 2
CD58-201ENST00000369487 PALLDQ8WX93 1383 aa27.54■■■□□ 2
CD58-201ENST00000369487 PHACTR3Q96KR7 559 aa27.54■■■□□ 2
CD58-201ENST00000369487 SCN11AQ9UI33 1791 aa27.54■■■□□ 2
CD58-201ENST00000369487 MAP3K5Q99683 1374 aa27.53■■■□□ 2
CD58-201ENST00000369487 GNAT3A8MTJ3 354 aa27.51■■□□□ 1.99
CD58-201ENST00000369487 ADAMTS7Q9UKP4 1686 aa27.51■■□□□ 1.99
CD58-201ENST00000369487 RNMTO43148 476 aaKnown RBP27.5■■□□□ 1.99
CD58-201ENST00000369487 HMGB2P26583 209 aaKnown RBP27.5■■□□□ 1.99
CD58-201ENST00000369487 CCNL1Q9UK58 526 aaPredicted RBP27.5■■□□□ 1.99
CD58-201ENST00000369487 WDR43Q15061 677 aaKnown RBP eCLIP27.49■■□□□ 1.99
CD58-201ENST00000369487 LRRC4BQ9NT99 713 aa27.49■■□□□ 1.99
CD58-201ENST00000369487 MRC1P22897 1456 aa27.49■■□□□ 1.99
CD58-201ENST00000369487 PAPPAQ13219 1627 aa27.49■■□□□ 1.99
CD58-201ENST00000369487 R3HDM1Q15032 1099 aaKnown RBP27.48■■□□□ 1.99
CD58-201ENST00000369487 LGR6Q9HBX8 967 aa27.48■■□□□ 1.99
CD58-201ENST00000369487 MAPK8IP3Q9UPT6 1336 aa27.47■■□□□ 1.99
CD58-201ENST00000369487 VIRMAQ69YN4 1812 aaKnown RBP27.47■■□□□ 1.99
CD58-201ENST00000369487 PSDA5PKW4 1024 aaPredicted RBP27.47■■□□□ 1.99
CD58-201ENST00000369487 NFATC2IPQ8NCF5 419 aa27.47■■□□□ 1.99
CD58-201ENST00000369487 PLEKHF1Q96S99 279 aa27.47■■□□□ 1.99
CD58-201ENST00000369487 SLC52A2Q9HAB3 445 aa27.47■■□□□ 1.99
CD58-201ENST00000369487 ANO8Q9HCE9 1232 aaPredicted RBP27.47■■□□□ 1.99
CD58-201ENST00000369487 STK32BQ9NY57 414 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms