RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 TRIM35Q9UPQ4 493 aa14.37□□□□□ -0.11
BRCC3-204ENST00000369462 MEGF6O75095 1541 aa14.37□□□□□ -0.11
BRCC3-204ENST00000369462 IL2RBP14784 551 aa14.37□□□□□ -0.11
BRCC3-204ENST00000369462 NWD2Q9ULI1 1742 aa14.37□□□□□ -0.11
BRCC3-204ENST00000369462 CCDC27Q2M243 656 aa14.37□□□□□ -0.11
BRCC3-204ENST00000369462 AMOTQ4VCS5 1084 aa14.37□□□□□ -0.11
BRCC3-204ENST00000369462 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
BRCC3-204ENST00000369462 SPATA31A1Q5TZJ5 1347 aa14.36□□□□□ -0.11
BRCC3-204ENST00000369462 ZNF521Q96K83 1311 aa14.36□□□□□ -0.11
BRCC3-204ENST00000369462 NRAPQ86VF7 1730 aa14.36□□□□□ -0.11
BRCC3-204ENST00000369462 ZNF530Q6P9A1 599 aaPredicted RBP14.36□□□□□ -0.11
BRCC3-204ENST00000369462 SPATA31A5Q5VU36 1347 aa14.35□□□□□ -0.11
BRCC3-204ENST00000369462 SPATA31A7Q8IWB4 1347 aa14.35□□□□□ -0.11
BRCC3-204ENST00000369462 DCTN1Q14203 1278 aa14.35□□□□□ -0.11
BRCC3-204ENST00000369462 VPS72Q15906 364 aa14.35□□□□□ -0.11
BRCC3-204ENST00000369462 CDCA7LQ96GN5 454 aa14.35□□□□□ -0.11
BRCC3-204ENST00000369462 PRKCSHP14314 528 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-204ENST00000369462 LMOD3Q0VAK6 560 aa14.34□□□□□ -0.11
BRCC3-204ENST00000369462 THUMPD2Q9BTF0 503 aaKnown RBP14.34□□□□□ -0.11
BRCC3-204ENST00000369462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
BRCC3-204ENST00000369462 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
BRCC3-204ENST00000369462 GOLGA2Q08379 1002 aa14.34□□□□□ -0.11
BRCC3-204ENST00000369462 GNAT3A8MTJ3 354 aa14.33□□□□□ -0.11
BRCC3-204ENST00000369462 CENPBP07199 599 aaPredicted RBP14.33□□□□□ -0.11
BRCC3-204ENST00000369462 MCM10Q7L590 875 aa14.33□□□□□ -0.11
BRCC3-204ENST00000369462 RTF1Q92541 710 aaKnown RBP14.33□□□□□ -0.11
BRCC3-204ENST00000369462 OVOS2A0A0G2JMS6 1433 aa14.33□□□□□ -0.12
BRCC3-204ENST00000369462 C1orf141Q5JVX7 400 aa14.33□□□□□ -0.12
BRCC3-204ENST00000369462 ZCRB1Q8TBF4 217 aaKnown RBP14.33□□□□□ -0.12
BRCC3-204ENST00000369462 THRAP3Q9Y2W1 955 aaKnown RBP14.33□□□□□ -0.12
BRCC3-204ENST00000369462 PDE3BQ13370 1112 aa14.33□□□□□ -0.12
BRCC3-204ENST00000369462 AKAP4Q5JQC9 854 aa14.32□□□□□ -0.12
BRCC3-204ENST00000369462 WDR63Q8IWG1 891 aa14.32□□□□□ -0.12
BRCC3-204ENST00000369462 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
BRCC3-204ENST00000369462 MAP3K5Q99683 1374 aa14.32□□□□□ -0.12
BRCC3-204ENST00000369462 DLG5Q8TDM6 1919 aa14.32□□□□□ -0.12
BRCC3-204ENST00000369462 PLEKHG2Q9H7P9 1386 aa14.31□□□□□ -0.12
BRCC3-204ENST00000369462 CYP27B1O15528 508 aa14.31□□□□□ -0.12
BRCC3-204ENST00000369462 FAM98CQ17RN3 349 aaKnown RBP14.31□□□□□ -0.12
BRCC3-204ENST00000369462 TRPC5Q9UL62 973 aaPredicted RBP14.31□□□□□ -0.12
BRCC3-204ENST00000369462 HTATSF1O43719 755 aaKnown RBP14.3□□□□□ -0.12
BRCC3-204ENST00000369462 MPRIPQ6WCQ1 1025 aa14.3□□□□□ -0.12
BRCC3-204ENST00000369462 IFNL2Q8IZJ0 200 aa14.3□□□□□ -0.12
BRCC3-204ENST00000369462 DDX54Q8TDD1 881 aaKnown RBP14.3□□□□□ -0.12
BRCC3-204ENST00000369462 QTRT2Q9H974 415 aaKnown RBP14.3□□□□□ -0.12
BRCC3-204ENST00000369462 DISP2A7MBM2 1401 aa14.3□□□□□ -0.12
BRCC3-204ENST00000369462 PHKG2P15735 406 aa14.3□□□□□ -0.12
BRCC3-204ENST00000369462 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
BRCC3-204ENST00000369462 IL17REQ8NFR9 667 aa14.3□□□□□ -0.12
BRCC3-204ENST00000369462 CDCA7Q9BWT1 371 aaPredicted RBP14.3□□□□□ -0.12
BRCC3-204ENST00000369462 EXOC5O00471 708 aa14.29□□□□□ -0.12
BRCC3-204ENST00000369462 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
BRCC3-204ENST00000369462 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
BRCC3-204ENST00000369462 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
BRCC3-204ENST00000369462 LAS1LQ9Y4W2 734 aaKnown RBP14.29□□□□□ -0.12
BRCC3-204ENST00000369462 PCDH11XQ9BZA7 1347 aa14.29□□□□□ -0.12
BRCC3-204ENST00000369462 PCDH11YQ9BZA8 1340 aa14.29□□□□□ -0.12
BRCC3-204ENST00000369462 PARP4Q9UKK3 1724 aaKnown RBP14.29□□□□□ -0.12
BRCC3-204ENST00000369462 E9PSI1 815 aa14.28□□□□□ -0.12
BRCC3-204ENST00000369462 CALD1Q05682 793 aaKnown RBP14.28□□□□□ -0.12
BRCC3-204ENST00000369462 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.28□□□□□ -0.12
BRCC3-204ENST00000369462 A0A0G2JS52 829 aa14.28□□□□□ -0.12
BRCC3-204ENST00000369462 MYT1Q01538 1121 aa14.28□□□□□ -0.12
BRCC3-204ENST00000369462 DDB1Q16531 1140 aa14.28□□□□□ -0.12
BRCC3-204ENST00000369462 ATRNO75882 1429 aa14.27□□□□□ -0.12
BRCC3-204ENST00000369462 PKD1L3Q7Z443 1732 aa14.27□□□□□ -0.13
BRCC3-204ENST00000369462 IL16Q14005 1332 aa14.27□□□□□ -0.13
BRCC3-204ENST00000369462 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
BRCC3-204ENST00000369462 DUSP27Q5VZP5 1158 aa14.26□□□□□ -0.13
BRCC3-204ENST00000369462 ZNF772Q68DY9 489 aaPredicted RBP14.26□□□□□ -0.13
BRCC3-204ENST00000369462 TSR2Q969E8 191 aaKnown RBP14.26□□□□□ -0.13
BRCC3-204ENST00000369462 CEMIPQ8WUJ3 1361 aa14.25□□□□□ -0.13
BRCC3-204ENST00000369462 HSP90AB1P08238 724 aaKnown RBP14.25□□□□□ -0.13
BRCC3-204ENST00000369462 TRMT2AQ8IZ69 625 aaKnown RBP14.25□□□□□ -0.13
BRCC3-204ENST00000369462 DCAF5Q96JK2 942 aa14.25□□□□□ -0.13
BRCC3-204ENST00000369462 CFAP44Q96MT7 982 aa14.25□□□□□ -0.13
BRCC3-204ENST00000369462 MYH16Q9H6N6 1097 aa14.25□□□□□ -0.13
BRCC3-204ENST00000369462 GNAI1P63096 354 aa14.25□□□□□ -0.13
BRCC3-204ENST00000369462 TEFQ10587 303 aa14.25□□□□□ -0.13
BRCC3-204ENST00000369462 ILDR1Q86SU0 546 aaPredicted RBP14.25□□□□□ -0.13
BRCC3-204ENST00000369462 IFT57Q9NWB7 429 aa14.25□□□□□ -0.13
BRCC3-204ENST00000369462 MIS18AQ9NYP9 233 aa14.24□□□□□ -0.13
BRCC3-204ENST00000369462 ZNF853P0CG23 659 aa14.23□□□□□ -0.13
BRCC3-204ENST00000369462 KDM6AO15550 1401 aaPredicted RBP14.23□□□□□ -0.13
BRCC3-204ENST00000369462 TNS2Q63HR2 1409 aa14.23□□□□□ -0.13
BRCC3-204ENST00000369462 GLI3P10071 1580 aa14.23□□□□□ -0.13
BRCC3-204ENST00000369462 FANCIQ9NVI1 1328 aa14.23□□□□□ -0.13
BRCC3-204ENST00000369462 NKX1-1Q15270 411 aaPredicted RBP14.23□□□□□ -0.13
BRCC3-204ENST00000369462 TAF7Q15545 349 aaPredicted RBP14.23□□□□□ -0.13
BRCC3-204ENST00000369462 CHL1O00533 1208 aa14.23□□□□□ -0.13
BRCC3-204ENST00000369462 MBIPQ9NS73 344 aa14.23□□□□□ -0.13
BRCC3-204ENST00000369462 WNK3Q9BYP7 1800 aa14.22□□□□□ -0.13
BRCC3-204ENST00000369462 ONECUT3O60422 494 aaPredicted RBP14.22□□□□□ -0.13
BRCC3-204ENST00000369462 MARCH10Q8NA82 808 aaPredicted RBP14.22□□□□□ -0.13
BRCC3-204ENST00000369462 TSPYL4Q9UJ04 414 aa14.22□□□□□ -0.13
BRCC3-204ENST00000369462 SHANK3Q9BYB0 1731 aa14.21□□□□□ -0.13
BRCC3-204ENST00000369462 NFATC2IPQ8NCF5 419 aa14.21□□□□□ -0.13
BRCC3-204ENST00000369462 SEPT12Q8IYM1 358 aa14.21□□□□□ -0.14
BRCC3-204ENST00000369462 RGS17Q9UGC6 210 aaPredicted RBP14.21□□□□□ -0.14
BRCC3-204ENST00000369462 SLC52A2Q9HAB3 445 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms