RNA–Protein interactions for RNA: ENST00000369128.9

VPS45-201, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2 BASIC

Gene VPS45, Length 2,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-201ENST00000369128 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
VPS45-201ENST00000369128 TSPYL6Q8N831 410 aa11.68□□□□□ -0.54
VPS45-201ENST00000369128 CT47B1P0C2W7 299 aaPredicted RBP11.68□□□□□ -0.54
VPS45-201ENST00000369128 CHRNA2Q15822 529 aa11.68□□□□□ -0.54
VPS45-201ENST00000369128 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.68□□□□□ -0.54
VPS45-201ENST00000369128 SSH1Q8WYL5 1049 aa11.68□□□□□ -0.54
VPS45-201ENST00000369128 FRAT1Q92837 279 aaPredicted RBP11.68□□□□□ -0.54
VPS45-201ENST00000369128 CCDC136Q96JN2 1154 aa11.68□□□□□ -0.54
VPS45-201ENST00000369128 CPDO75976 1380 aa11.67□□□□□ -0.54
VPS45-201ENST00000369128 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
VPS45-201ENST00000369128 MAP3K5Q99683 1374 aa11.67□□□□□ -0.54
VPS45-201ENST00000369128 RLBP1P12271 317 aa11.67□□□□□ -0.54
VPS45-201ENST00000369128 PANK1Q8TE04 598 aa11.67□□□□□ -0.54
VPS45-201ENST00000369128 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
VPS45-201ENST00000369128 C8orf58Q8NAV2 365 aa11.66□□□□□ -0.54
VPS45-201ENST00000369128 SMC4Q9NTJ3 1288 aa11.66□□□□□ -0.54
VPS45-201ENST00000369128 AHDC1Q5TGY3 1603 aaPredicted RBP11.65□□□□□ -0.54
VPS45-201ENST00000369128 ELL2O00472 640 aaPredicted RBP11.65□□□□□ -0.54
VPS45-201ENST00000369128 CHL1O00533 1208 aa11.65□□□□□ -0.54
VPS45-201ENST00000369128 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
VPS45-201ENST00000369128 VAMP4O75379 141 aa11.64□□□□□ -0.55
VPS45-201ENST00000369128 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
VPS45-201ENST00000369128 MEGF6O75095 1541 aa11.64□□□□□ -0.55
VPS45-201ENST00000369128 GNAT3A8MTJ3 354 aa11.64□□□□□ -0.55
VPS45-201ENST00000369128 PDE3AQ14432 1141 aa11.64□□□□□ -0.55
VPS45-201ENST00000369128 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
VPS45-201ENST00000369128 RTF1Q92541 710 aaKnown RBP11.64□□□□□ -0.55
VPS45-201ENST00000369128 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
VPS45-201ENST00000369128 COG6Q9Y2V7 657 aa11.63□□□□□ -0.55
VPS45-201ENST00000369128 ADAMTS7Q9UKP4 1686 aa11.63□□□□□ -0.55
VPS45-201ENST00000369128 KDM3BQ7LBC6 1761 aa11.63□□□□□ -0.55
VPS45-201ENST00000369128 TRIM27P14373 513 aa11.63□□□□□ -0.55
VPS45-201ENST00000369128 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
VPS45-201ENST00000369128 CEMIPQ8WUJ3 1361 aa11.63□□□□□ -0.55
VPS45-201ENST00000369128 SIPA1L3O60292 1781 aaPredicted RBP11.62□□□□□ -0.55
VPS45-201ENST00000369128 PKD1L3Q7Z443 1732 aa11.62□□□□□ -0.55
VPS45-201ENST00000369128 COL5A2P05997 1499 aaPredicted RBP11.62□□□□□ -0.55
VPS45-201ENST00000369128 TCERG1O14776 1098 aaKnown RBP11.62□□□□□ -0.55
VPS45-201ENST00000369128 HTATSF1O43719 755 aaKnown RBP11.62□□□□□ -0.55
VPS45-201ENST00000369128 ALDH1L2Q3SY69 923 aa11.62□□□□□ -0.55
VPS45-201ENST00000369128 NLRP2Q9NX02 1062 aa11.62□□□□□ -0.55
VPS45-201ENST00000369128 COL22A1Q8NFW1 1626 aaPredicted RBP11.61□□□□□ -0.55
VPS45-201ENST00000369128 ZKSCAN2Q63HK3 967 aa11.61□□□□□ -0.55
VPS45-201ENST00000369128 PRDM11Q9NQV5 511 aa11.61□□□□□ -0.55
VPS45-201ENST00000369128 NOB1Q9ULX3 412 aaKnown RBP11.61□□□□□ -0.55
VPS45-201ENST00000369128 COL16A1Q07092 1604 aaPredicted RBP11.61□□□□□ -0.55
VPS45-201ENST00000369128 PHLPP1O60346 1717 aa11.61□□□□□ -0.55
VPS45-201ENST00000369128 ZNF530Q6P9A1 599 aaPredicted RBP11.6□□□□□ -0.55
VPS45-201ENST00000369128 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
VPS45-201ENST00000369128 TSPYL4Q9UJ04 414 aa11.6□□□□□ -0.55
VPS45-201ENST00000369128 SCN11AQ9UI33 1791 aa11.6□□□□□ -0.55
VPS45-201ENST00000369128 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
VPS45-201ENST00000369128 MRPL50Q8N5N7 158 aaKnown RBP11.6□□□□□ -0.55
VPS45-201ENST00000369128 ZNF428Q96B54 188 aa11.6□□□□□ -0.55
VPS45-201ENST00000369128 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
VPS45-201ENST00000369128 ATF7IPQ6VMQ6 1270 aa11.59□□□□□ -0.55
VPS45-201ENST00000369128 KDM2BQ8NHM5 1336 aa11.59□□□□□ -0.55
VPS45-201ENST00000369128 SHANK3Q9BYB0 1731 aa11.59□□□□□ -0.55
VPS45-201ENST00000369128 PARP4Q9UKK3 1724 aaKnown RBP11.59□□□□□ -0.55
VPS45-201ENST00000369128 CSB-PGBD3P0DP91 1061 aa11.59□□□□□ -0.55
VPS45-201ENST00000369128 BRPF1P55201 1214 aaPredicted RBP11.59□□□□□ -0.55
VPS45-201ENST00000369128 HAP1P54257 671 aaPredicted RBP11.58□□□□□ -0.56
VPS45-201ENST00000369128 PLEKHO1Q53GL0 409 aaPredicted RBP11.58□□□□□ -0.56
VPS45-201ENST00000369128 AKAP4Q5JQC9 854 aa11.58□□□□□ -0.56
VPS45-201ENST00000369128 MPRIPQ6WCQ1 1025 aa11.58□□□□□ -0.56
VPS45-201ENST00000369128 DZIP1LQ8IYY4 767 aaKnown RBP11.58□□□□□ -0.56
VPS45-201ENST00000369128 AMOTQ4VCS5 1084 aa11.58□□□□□ -0.56
VPS45-201ENST00000369128 FTSJ3Q8IY81 847 aaKnown RBP11.58□□□□□ -0.56
VPS45-201ENST00000369128 WDR17Q8IZU2 1322 aa11.57□□□□□ -0.56
VPS45-201ENST00000369128 KDM6AO15550 1401 aaPredicted RBP11.57□□□□□ -0.56
VPS45-201ENST00000369128 MVPQ14764 893 aaKnown RBP11.57□□□□□ -0.56
VPS45-201ENST00000369128 SKAP1Q86WV1 359 aa11.57□□□□□ -0.56
VPS45-201ENST00000369128 TSHZ2Q9NRE2 1034 aa11.57□□□□□ -0.56
VPS45-201ENST00000369128 OVOS2A0A0G2JMS6 1433 aa11.57□□□□□ -0.56
VPS45-201ENST00000369128 RGS12O14924 1447 aa11.57□□□□□ -0.56
VPS45-201ENST00000369128 TMEM57Q8N5G2 664 aa11.56□□□□□ -0.56
VPS45-201ENST00000369128 RAPGEF4Q8WZA2 1011 aa11.56□□□□□ -0.56
VPS45-201ENST00000369128 COL14A1Q05707 1796 aaKnown RBP11.56□□□□□ -0.56
VPS45-201ENST00000369128 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
VPS45-201ENST00000369128 CACNA1FO60840 1977 aa11.55□□□□□ -0.56
VPS45-201ENST00000369128 C1orf141Q5JVX7 400 aa11.55□□□□□ -0.56
VPS45-201ENST00000369128 RNMTO43148 476 aaKnown RBP11.55□□□□□ -0.56
VPS45-201ENST00000369128 PLCH1Q4KWH8 1693 aa11.55□□□□□ -0.56
VPS45-201ENST00000369128 ABCC4O15439 1325 aa11.54□□□□□ -0.56
VPS45-201ENST00000369128 KCNQ3O43525 872 aa11.54□□□□□ -0.56
VPS45-201ENST00000369128 TATP17735 454 aaPredicted RBP11.54□□□□□ -0.56
VPS45-201ENST00000369128 LARP1Q6PKG0 1096 aaKnown RBP11.54□□□□□ -0.56
VPS45-201ENST00000369128 ITPRIPQ8IWB1 547 aa11.54□□□□□ -0.56
VPS45-201ENST00000369128 PCDHB15Q9Y5E8 787 aa11.54□□□□□ -0.56
VPS45-201ENST00000369128 PLEKHG2Q9H7P9 1386 aa11.54□□□□□ -0.56
VPS45-201ENST00000369128 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
VPS45-201ENST00000369128 CYP27B1O15528 508 aa11.54□□□□□ -0.56
VPS45-201ENST00000369128 IGHDP01880 384 aa11.54□□□□□ -0.56
VPS45-201ENST00000369128 TOM1L2Q6ZVM7 507 aa11.54□□□□□ -0.56
VPS45-201ENST00000369128 STRN4Q9NRL3 753 aa11.54□□□□□ -0.56
VPS45-201ENST00000369128 MRC1P22897 1456 aa11.53□□□□□ -0.56
VPS45-201ENST00000369128 PHKG2P15735 406 aa11.53□□□□□ -0.56
VPS45-201ENST00000369128 ARHGAP45Q92619 1136 aa11.53□□□□□ -0.56
VPS45-201ENST00000369128 BABAM1Q9NWV8 329 aa11.53□□□□□ -0.56
VPS45-201ENST00000369128 C5P01031 1676 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms