RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 IP6K1Q92551 441 aa13.57□□□□□ -0.24
TPM3-212ENST00000368533 ZMYND15Q9H091 742 aa13.57□□□□□ -0.24
TPM3-212ENST00000368533 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
TPM3-212ENST00000368533 NFKBIBQ15653 356 aa13.57□□□□□ -0.24
TPM3-212ENST00000368533 ANKRD24Q8TF21 1146 aa13.57□□□□□ -0.24
TPM3-212ENST00000368533 MARF1Q9Y4F3 1742 aaKnown RBP13.57□□□□□ -0.24
TPM3-212ENST00000368533 DAXXQ9UER7 740 aaPredicted RBP13.57□□□□□ -0.24
TPM3-212ENST00000368533 DLG5Q8TDM6 1919 aa13.56□□□□□ -0.24
TPM3-212ENST00000368533 KCNH5Q8NCM2 988 aa13.56□□□□□ -0.24
TPM3-212ENST00000368533 NLRP2Q9NX02 1062 aa13.56□□□□□ -0.24
TPM3-212ENST00000368533 NOB1Q9ULX3 412 aaKnown RBP13.56□□□□□ -0.24
TPM3-212ENST00000368533 IGSF1Q8N6C5 1336 aa13.56□□□□□ -0.24
TPM3-212ENST00000368533 ARHGEF25Q86VW2 580 aa13.56□□□□□ -0.24
TPM3-212ENST00000368533 FTSJ3Q8IY81 847 aaKnown RBP13.55□□□□□ -0.24
TPM3-212ENST00000368533 LTN1O94822 1766 aa13.55□□□□□ -0.24
TPM3-212ENST00000368533 NPHP3Q7Z494 1330 aa13.55□□□□□ -0.24
TPM3-212ENST00000368533 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
TPM3-212ENST00000368533 GNAI1P63096 354 aa13.54□□□□□ -0.24
TPM3-212ENST00000368533 TWISTNBQ3B726 338 aaPredicted RBP13.54□□□□□ -0.24
TPM3-212ENST00000368533 MPRIPQ6WCQ1 1025 aa13.53□□□□□ -0.24
TPM3-212ENST00000368533 ITPRIPQ8IWB1 547 aa13.53□□□□□ -0.24
TPM3-212ENST00000368533 ARHGEF10O15013 1369 aa13.53□□□□□ -0.24
TPM3-212ENST00000368533 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
TPM3-212ENST00000368533 CFAP44Q96MT7 982 aa13.53□□□□□ -0.24
TPM3-212ENST00000368533 LGR6Q9HBX8 967 aa13.53□□□□□ -0.24
TPM3-212ENST00000368533 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
TPM3-212ENST00000368533 RGPD2P0DJD1 1756 aa13.52□□□□□ -0.24
TPM3-212ENST00000368533 TRIM27P14373 513 aa13.52□□□□□ -0.24
TPM3-212ENST00000368533 PIP4K2BP78356 416 aa13.52□□□□□ -0.25
TPM3-212ENST00000368533 IFT57Q9NWB7 429 aa13.52□□□□□ -0.25
TPM3-212ENST00000368533 XIRP1Q702N8 1843 aaKnown RBP13.51□□□□□ -0.25
TPM3-212ENST00000368533 VAMP4O75379 141 aa13.51□□□□□ -0.25
TPM3-212ENST00000368533 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
TPM3-212ENST00000368533 NFAT5O94916 1531 aa13.51□□□□□ -0.25
TPM3-212ENST00000368533 ZKSCAN2Q63HK3 967 aa13.51□□□□□ -0.25
TPM3-212ENST00000368533 ARXQ96QS3 562 aa13.51□□□□□ -0.25
TPM3-212ENST00000368533 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
TPM3-212ENST00000368533 ZNF530Q6P9A1 599 aaPredicted RBP13.5□□□□□ -0.25
TPM3-212ENST00000368533 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
TPM3-212ENST00000368533 GNAT3A8MTJ3 354 aa13.5□□□□□ -0.25
TPM3-212ENST00000368533 IL16Q14005 1332 aa13.5□□□□□ -0.25
TPM3-212ENST00000368533 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
TPM3-212ENST00000368533 SPATA31A3Q5VYP0 1347 aa13.49□□□□□ -0.25
TPM3-212ENST00000368533 IGHDP01880 384 aa13.49□□□□□ -0.25
TPM3-212ENST00000368533 DZIP1LQ8IYY4 767 aaKnown RBP13.49□□□□□ -0.25
TPM3-212ENST00000368533 GAS2L2Q8NHY3 880 aa13.49□□□□□ -0.25
TPM3-212ENST00000368533 ZNF853P0CG23 659 aa13.49□□□□□ -0.25
TPM3-212ENST00000368533 CALD1Q05682 793 aaKnown RBP13.49□□□□□ -0.25
TPM3-212ENST00000368533 TMEM57Q8N5G2 664 aa13.49□□□□□ -0.25
TPM3-212ENST00000368533 ZNF428Q96B54 188 aa13.49□□□□□ -0.25
TPM3-212ENST00000368533 C1orf115Q9H7X2 142 aa13.49□□□□□ -0.25
TPM3-212ENST00000368533 RGPD5Q99666 1765 aa13.48□□□□□ -0.25
TPM3-212ENST00000368533 MED1Q15648 1581 aaPredicted RBP13.48□□□□□ -0.25
TPM3-212ENST00000368533 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
TPM3-212ENST00000368533 DDRGK1Q96HY6 314 aa13.48□□□□□ -0.25
TPM3-212ENST00000368533 KDRP35968 1356 aa13.48□□□□□ -0.25
TPM3-212ENST00000368533 USP19O94966 1318 aa13.48□□□□□ -0.25
TPM3-212ENST00000368533 KCNQ3O43525 872 aa13.48□□□□□ -0.25
TPM3-212ENST00000368533 RGPD1P0DJD0 1748 aa13.47□□□□□ -0.25
TPM3-212ENST00000368533 ATF7IPQ6VMQ6 1270 aa13.47□□□□□ -0.25
TPM3-212ENST00000368533 TRPM3Q9HCF6 1732 aaPredicted RBP13.47□□□□□ -0.25
TPM3-212ENST00000368533 ERBB3P21860 1342 aa13.47□□□□□ -0.25
TPM3-212ENST00000368533 KDM2BQ8NHM5 1336 aa13.47□□□□□ -0.25
TPM3-212ENST00000368533 PCDHB15Q9Y5E8 787 aa13.47□□□□□ -0.25
TPM3-212ENST00000368533 TNS3Q68CZ2 1445 aa13.47□□□□□ -0.25
TPM3-212ENST00000368533 CHL1O00533 1208 aa13.46□□□□□ -0.25
TPM3-212ENST00000368533 EIF2S2P20042 333 aaKnown RBP13.46□□□□□ -0.25
TPM3-212ENST00000368533 PDE3AQ14432 1141 aa13.46□□□□□ -0.25
TPM3-212ENST00000368533 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
TPM3-212ENST00000368533 RRAGDQ9NQL2 400 aaPredicted RBP13.45□□□□□ -0.26
TPM3-212ENST00000368533 ANXA1P04083 346 aa13.45□□□□□ -0.26
TPM3-212ENST00000368533 MRPL50Q8N5N7 158 aaKnown RBP13.45□□□□□ -0.26
TPM3-212ENST00000368533 DCCP43146 1447 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 PXDNQ92626 1479 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 TOM1L2Q6ZVM7 507 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 RAPGEF4Q8WZA2 1011 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 MAP3K5Q99683 1374 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
TPM3-212ENST00000368533 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 SLC4A10Q6U841 1118 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 G2E3Q7L622 706 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 FAM43AQ8N2R8 423 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 CRB1P82279 1406 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 F6X3S4 739 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 PODXL2Q9NZ53 605 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 KIF1AQ12756 1690 aa13.44□□□□□ -0.26
TPM3-212ENST00000368533 TEFQ10587 303 aa13.43□□□□□ -0.26
TPM3-212ENST00000368533 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
TPM3-212ENST00000368533 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
TPM3-212ENST00000368533 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
TPM3-212ENST00000368533 ADAMTS2O95450 1211 aa13.43□□□□□ -0.26
TPM3-212ENST00000368533 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
TPM3-212ENST00000368533 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
TPM3-212ENST00000368533 GLIPR1L2Q4G1C9 344 aa13.42□□□□□ -0.26
TPM3-212ENST00000368533 PLEKHO1Q53GL0 409 aaPredicted RBP13.42□□□□□ -0.26
TPM3-212ENST00000368533 PRAMEF22A3QJZ6 481 aa13.42□□□□□ -0.26
TPM3-212ENST00000368533 EVA1CP58658 441 aa13.42□□□□□ -0.26
TPM3-212ENST00000368533 ALS2Q96Q42 1657 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms