RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 KIAA0232Q92628 1395 aa31.62■■■□□ 2.65
CLK2-203ENST00000368361 C1orf167Q5SNV9 1468 aa31.61■■■□□ 2.65
CLK2-203ENST00000368361 HDAC1Q13547 482 aaPredicted RBP31.61■■■□□ 2.65
CLK2-203ENST00000368361 MIS18AQ9NYP9 233 aa31.61■■■□□ 2.65
CLK2-203ENST00000368361 ERICH6Q7L0X2 663 aa31.6■■■□□ 2.65
CLK2-203ENST00000368361 USHBP1Q8N6Y0 703 aa31.6■■■□□ 2.65
CLK2-203ENST00000368361 ABCC4O15439 1325 aa31.6■■■□□ 2.65
CLK2-203ENST00000368361 STRCP1A6NGW2 1772 aa31.59■■■□□ 2.65
CLK2-203ENST00000368361 ZBTB7CA1YPR0 619 aa31.58■■■□□ 2.65
CLK2-203ENST00000368361 TRPM3Q9HCF6 1732 aaPredicted RBP31.58■■■□□ 2.65
CLK2-203ENST00000368361 NOP58Q9Y2X3 529 aaKnown RBP31.58■■■□□ 2.65
CLK2-203ENST00000368361 PHRF1Q9P1Y6 1649 aaKnown RBP31.58■■■□□ 2.65
CLK2-203ENST00000368361 HAP1P54257 671 aaPredicted RBP31.57■■■□□ 2.64
CLK2-203ENST00000368361 ZBTB7BO15156 539 aaPredicted RBP31.57■■■□□ 2.64
CLK2-203ENST00000368361 HTATSF1O43719 755 aaKnown RBP31.57■■■□□ 2.64
CLK2-203ENST00000368361 TSPYL4Q9UJ04 414 aa31.57■■■□□ 2.64
CLK2-203ENST00000368361 KIF1AQ12756 1690 aa31.57■■■□□ 2.64
CLK2-203ENST00000368361 LRRC37A3O60309 1634 aa31.56■■■□□ 2.64
CLK2-203ENST00000368361 GNAT3A8MTJ3 354 aa31.56■■■□□ 2.64
CLK2-203ENST00000368361 LMOD2Q6P5Q4 547 aa31.56■■■□□ 2.64
CLK2-203ENST00000368361 PLEKHG5O94827 1062 aa31.56■■■□□ 2.64
CLK2-203ENST00000368361 GCP02774 474 aa31.56■■■□□ 2.64
CLK2-203ENST00000368361 SLIT3O75094 1523 aa31.55■■■□□ 2.64
CLK2-203ENST00000368361 KRT28Q7Z3Y7 464 aa31.55■■■□□ 2.64
CLK2-203ENST00000368361 API5Q9BZZ5 524 aaKnown RBP31.55■■■□□ 2.64
CLK2-203ENST00000368361 TMEM94Q12767 1356 aa31.55■■■□□ 2.64
CLK2-203ENST00000368361 NBPF6Q5VWK0 638 aa31.54■■■□□ 2.64
CLK2-203ENST00000368361 NBPF4Q96M43 638 aa31.54■■■□□ 2.64
CLK2-203ENST00000368361 VIRMAQ69YN4 1812 aaKnown RBP31.53■■■□□ 2.64
CLK2-203ENST00000368361 MSH6P52701 1360 aa31.53■■■□□ 2.64
CLK2-203ENST00000368361 MAP3K5Q99683 1374 aa31.53■■■□□ 2.64
CLK2-203ENST00000368361 HSPA2P54652 639 aa31.53■■■□□ 2.64
CLK2-203ENST00000368361 RGPD2P0DJD1 1756 aa31.51■■■□□ 2.63
CLK2-203ENST00000368361 ARHGEF25Q86VW2 580 aa31.51■■■□□ 2.63
CLK2-203ENST00000368361 CHMP4BQ9H444 224 aaKnown RBP31.5■■■□□ 2.63
CLK2-203ENST00000368361 MST1RQ04912 1400 aa31.5■■■□□ 2.63
CLK2-203ENST00000368361 ATF3P18847 181 aa31.5■■■□□ 2.63
CLK2-203ENST00000368361 SMC5Q8IY18 1101 aa31.5■■■□□ 2.63
CLK2-203ENST00000368361 ZBTB47Q9UFB7 747 aaPredicted RBP31.5■■■□□ 2.63
CLK2-203ENST00000368361 USP19O94966 1318 aa31.49■■■□□ 2.63
CLK2-203ENST00000368361 IL17REQ8NFR9 667 aa31.49■■■□□ 2.63
CLK2-203ENST00000368361 LRRC59Q96AG4 307 aaKnown RBP31.47■■■□□ 2.63
CLK2-203ENST00000368361 C1orf115Q9H7X2 142 aa31.47■■■□□ 2.63
CLK2-203ENST00000368361 RGS12O14924 1447 aa31.47■■■□□ 2.63
CLK2-203ENST00000368361 DCCP43146 1447 aa31.45■■■□□ 2.63
CLK2-203ENST00000368361 ALS2Q96Q42 1657 aa31.44■■■□□ 2.62
CLK2-203ENST00000368361 NCOA3Q9Y6Q9 1424 aa31.43■■■□□ 2.62
CLK2-203ENST00000368361 SLC4A2P04920 1241 aa31.43■■■□□ 2.62
CLK2-203ENST00000368361 PTPRCP08575 1304 aa31.43■■■□□ 2.62
CLK2-203ENST00000368361 DDX17Q92841 729 aaKnown RBP31.42■■■□□ 2.62
CLK2-203ENST00000368361 INTS3Q68E01 1043 aaKnown RBP31.41■■■□□ 2.62
CLK2-203ENST00000368361 TAF7Q15545 349 aaPredicted RBP31.39■■■□□ 2.62
CLK2-203ENST00000368361 ANKRD24Q8TF21 1146 aa31.39■■■□□ 2.62
CLK2-203ENST00000368361 AXIN2Q9Y2T1 843 aa31.39■■■□□ 2.62
CLK2-203ENST00000368361 MED1Q15648 1581 aaPredicted RBP31.38■■■□□ 2.61
CLK2-203ENST00000368361 SIRT2Q8IXJ6 389 aa31.37■■■□□ 2.61
CLK2-203ENST00000368361 CEMIPQ8WUJ3 1361 aa31.37■■■□□ 2.61
CLK2-203ENST00000368361 NUCB1Q02818 461 aa31.37■■■□□ 2.61
CLK2-203ENST00000368361 CADPS2Q86UW7 1296 aa31.37■■■□□ 2.61
CLK2-203ENST00000368361 SEC24BO95487 1268 aa31.36■■■□□ 2.61
CLK2-203ENST00000368361 BABAM1Q9NWV8 329 aa31.36■■■□□ 2.61
CLK2-203ENST00000368361 NCAPD2Q15021 1401 aa31.36■■■□□ 2.61
CLK2-203ENST00000368361 G2E3Q7L622 706 aa31.36■■■□□ 2.61
CLK2-203ENST00000368361 RGPD5Q99666 1765 aa31.35■■■□□ 2.61
CLK2-203ENST00000368361 DDRGK1Q96HY6 314 aa31.34■■■□□ 2.61
CLK2-203ENST00000368361 ZC3H6P61129 1189 aaKnown RBP31.34■■■□□ 2.61
CLK2-203ENST00000368361 LGR6Q9HBX8 967 aa31.33■■■□□ 2.61
CLK2-203ENST00000368361 FAM208AQ9UK61 1670 aaKnown RBP31.32■■■□□ 2.61
CLK2-203ENST00000368361 GCC1Q96CN9 775 aa31.32■■■□□ 2.6
CLK2-203ENST00000368361 LMO7Q8WWI1 1683 aa31.32■■■□□ 2.6
CLK2-203ENST00000368361 CAMTA1Q9Y6Y1 1673 aa31.32■■■□□ 2.6
CLK2-203ENST00000368361 CHD1LQ86WJ1 897 aa31.32■■■□□ 2.6
CLK2-203ENST00000368361 STK31Q9BXU1 1019 aa31.32■■■□□ 2.6
CLK2-203ENST00000368361 LNPKQ9C0E8 428 aa31.32■■■□□ 2.6
CLK2-203ENST00000368361 PLEKHO1Q53GL0 409 aaPredicted RBP31.31■■■□□ 2.6
CLK2-203ENST00000368361 ZNF530Q6P9A1 599 aaPredicted RBP31.31■■■□□ 2.6
CLK2-203ENST00000368361 XIRP1Q702N8 1843 aaKnown RBP31.3■■■□□ 2.6
CLK2-203ENST00000368361 NPHP3Q7Z494 1330 aa31.3■■■□□ 2.6
CLK2-203ENST00000368361 AKAP4Q5JQC9 854 aa31.3■■■□□ 2.6
CLK2-203ENST00000368361 CCDC30Q5VVM6 783 aa31.3■■■□□ 2.6
CLK2-203ENST00000368361 LMTK3Q96Q04 1460 aa31.3■■■□□ 2.6
CLK2-203ENST00000368361 KDM4FA0A1W2PPD8 638 aa31.29■■■□□ 2.6
CLK2-203ENST00000368361 AMOTQ4VCS5 1084 aa31.29■■■□□ 2.6
CLK2-203ENST00000368361 NECTIN2Q92692 538 aa31.29■■■□□ 2.6
CLK2-203ENST00000368361 PXDNQ92626 1479 aa31.28■■■□□ 2.6
CLK2-203ENST00000368361 ERBB3P21860 1342 aa31.28■■■□□ 2.6
CLK2-203ENST00000368361 F6X3S4 739 aa31.27■■■□□ 2.6
CLK2-203ENST00000368361 STRCQ7RTU9 1775 aa31.27■■■□□ 2.6
CLK2-203ENST00000368361 SOS1Q07889 1333 aaPredicted RBP31.27■■■□□ 2.6
CLK2-203ENST00000368361 ANKRD45Q5TZF3 282 aa31.26■■■□□ 2.6
CLK2-203ENST00000368361 SLC4A10Q6U841 1118 aa31.25■■■□□ 2.59
CLK2-203ENST00000368361 MPRIPQ6WCQ1 1025 aa31.25■■■□□ 2.59
CLK2-203ENST00000368361 MEIS3Q99687 375 aa31.25■■■□□ 2.59
CLK2-203ENST00000368361 TNS3Q68CZ2 1445 aa31.25■■■□□ 2.59
CLK2-203ENST00000368361 ATP10DQ9P241 1426 aa31.25■■■□□ 2.59
CLK2-203ENST00000368361 FLIIQ13045 1269 aa31.24■■■□□ 2.59
CLK2-203ENST00000368361 KDM3BQ7LBC6 1761 aa31.24■■■□□ 2.59
CLK2-203ENST00000368361 CABLES1Q8TDN4 633 aa31.23■■■□□ 2.59
CLK2-203ENST00000368361 CACNA1FO60840 1977 aa31.22■■■□□ 2.59
CLK2-203ENST00000368361 C1orf141Q5JVX7 400 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms