RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ZNF395Q9H8N7 513 aaPredicted RBP6.61□□□□□ -1.35
RNU4-48P-201ENST00000365559 TFIP11Q9UBB9 837 aaKnown RBP6.61□□□□□ -1.35
RNU4-48P-201ENST00000365559 USP17L5A8MUK1 530 aa6.6□□□□□ -1.35
RNU4-48P-201ENST00000365559 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
RNU4-48P-201ENST00000365559 ATP9BO43861 1147 aa6.6□□□□□ -1.35
RNU4-48P-201ENST00000365559 UPP2O95045 317 aa6.6□□□□□ -1.35
RNU4-48P-201ENST00000365559 MYCP01106 439 aaPredicted RBP6.6□□□□□ -1.35
RNU4-48P-201ENST00000365559 USP4Q13107 963 aa6.6□□□□□ -1.35
RNU4-48P-201ENST00000365559 NCOA4Q13772 614 aa6.6□□□□□ -1.35
RNU4-48P-201ENST00000365559 SCARF1Q14162 830 aa6.6□□□□□ -1.35
RNU4-48P-201ENST00000365559 USP17L3A6NCW0 530 aa6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 USP17L4A6NCW7 530 aa6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 PALM3A6NDB9 673 aaPredicted RBP6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 STAU1O95793 577 aaKnown RBP6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 SNRPBP14678 240 aaKnown RBP6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 PTGIRP43119 386 aa6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 USP17L2Q6R6M4 530 aa6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 USP17L1Q7RTZ2 530 aa6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 TRIM52Q96A61 297 aa6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 TRIM47Q96LD4 638 aa6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 PPP1R12CQ9BZL4 782 aa6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 ESF1Q9H501 851 aaKnown RBP6.59□□□□□ -1.35
RNU4-48P-201ENST00000365559 C11orf95C9JLR9 678 aaPredicted RBP6.58□□□□□ -1.36
RNU4-48P-201ENST00000365559 SPINT1O43278 529 aa6.58□□□□□ -1.36
RNU4-48P-201ENST00000365559 EML3Q32P44 896 aa6.58□□□□□ -1.36
RNU4-48P-201ENST00000365559 CYP2U1Q7Z449 544 aa6.58□□□□□ -1.36
RNU4-48P-201ENST00000365559 PLEKHM2Q8IWE5 1019 aa6.58□□□□□ -1.36
RNU4-48P-201ENST00000365559 INSM2Q96T92 566 aaPredicted RBP6.58□□□□□ -1.36
RNU4-48P-201ENST00000365559 C1orf115Q9H7X2 142 aa6.58□□□□□ -1.36
RNU4-48P-201ENST00000365559 SENP2Q9HC62 589 aa6.58□□□□□ -1.36
RNU4-48P-201ENST00000365559 MAFBQ9Y5Q3 323 aaPredicted RBP6.58□□□□□ -1.36
RNU4-48P-201ENST00000365559 A0A1W2PRU2 124 aa6.57□□□□□ -1.36
RNU4-48P-201ENST00000365559 CTSOP43234 321 aaPredicted RBP6.57□□□□□ -1.36
RNU4-48P-201ENST00000365559 CFAP70Q5T0N1 1121 aa6.57□□□□□ -1.36
RNU4-48P-201ENST00000365559 ZNF787Q6DD87 383 aa6.57□□□□□ -1.36
RNU4-48P-201ENST00000365559 ERICH6Q7L0X2 663 aa6.57□□□□□ -1.36
RNU4-48P-201ENST00000365559 SIRT1Q96EB6 747 aa6.57□□□□□ -1.36
RNU4-48P-201ENST00000365559 ARHGEF10LQ9HCE6 1279 aa6.57□□□□□ -1.36
RNU4-48P-201ENST00000365559 RAB6BQ9NRW1 208 aa6.57□□□□□ -1.36
RNU4-48P-201ENST00000365559 SOS2Q07890 1332 aaPredicted RBP6.56□□□□□ -1.36
RNU4-48P-201ENST00000365559 SOBPA7XYQ1 873 aa6.56□□□□□ -1.36
RNU4-48P-201ENST00000365559 LZTS3O60299 673 aaPredicted RBP6.56□□□□□ -1.36
RNU4-48P-201ENST00000365559 KIFC2Q96AC6 838 aa6.56□□□□□ -1.36
RNU4-48P-201ENST00000365559 NOD1Q9Y239 953 aa6.56□□□□□ -1.36
RNU4-48P-201ENST00000365559 PCDHGA11Q9Y5H2 935 aa6.56□□□□□ -1.36
RNU4-48P-201ENST00000365559 TTLL8A6PVC2 850 aa6.55□□□□□ -1.36
RNU4-48P-201ENST00000365559 MEN1O00255 615 aa6.55□□□□□ -1.36
RNU4-48P-201ENST00000365559 GNRH1P01148 92 aa6.55□□□□□ -1.36
RNU4-48P-201ENST00000365559 LMOD1P29536 600 aaPredicted RBP6.55□□□□□ -1.36
RNU4-48P-201ENST00000365559 GTF2IP78347 998 aa6.55□□□□□ -1.36
RNU4-48P-201ENST00000365559 FOXD4L5Q5VV16 416 aaPredicted RBP6.55□□□□□ -1.36
RNU4-48P-201ENST00000365559 POLMQ9NP87 494 aaPredicted RBP6.55□□□□□ -1.36
RNU4-48P-201ENST00000365559 DNMT3LQ9UJW3 386 aa6.55□□□□□ -1.36
RNU4-48P-201ENST00000365559 FIGNL2A6NMB9 653 aa6.54□□□□□ -1.36
RNU4-48P-201ENST00000365559 SUPT5HO00267 1087 aaKnown RBP6.54□□□□□ -1.36
RNU4-48P-201ENST00000365559 IL2RAP01589 272 aa6.54□□□□□ -1.36
RNU4-48P-201ENST00000365559 SCNN1DP51172 638 aa6.54□□□□□ -1.36
RNU4-48P-201ENST00000365559 CLDN10P78369 228 aa6.54□□□□□ -1.36
RNU4-48P-201ENST00000365559 CLN3Q13286 438 aa6.54□□□□□ -1.36
RNU4-48P-201ENST00000365559 ETNK1Q9HBU6 452 aa6.54□□□□□ -1.36
RNU4-48P-201ENST00000365559 MKRN1Q9UHC7 482 aaKnown RBP6.54□□□□□ -1.36
RNU4-48P-201ENST00000365559 MAN1A2O60476 641 aa6.53□□□□□ -1.36
RNU4-48P-201ENST00000365559 RFX1P22670 979 aa6.53□□□□□ -1.36
RNU4-48P-201ENST00000365559 KANK4Q5T7N3 995 aaPredicted RBP6.53□□□□□ -1.36
RNU4-48P-201ENST00000365559 CCDC82Q8N4S0 544 aa6.53□□□□□ -1.36
RNU4-48P-201ENST00000365559 RNF217Q8TC41 542 aa6.53□□□□□ -1.36
RNU4-48P-201ENST00000365559 CNKSR1Q969H4 720 aa6.53□□□□□ -1.36
RNU4-48P-201ENST00000365559 KIAA1024Q9UPX6 916 aa6.53□□□□□ -1.36
RNU4-48P-201ENST00000365559 ZBTB7BO15156 539 aaPredicted RBP6.52□□□□□ -1.37
RNU4-48P-201ENST00000365559 RNF144AP50876 292 aaPredicted RBP6.52□□□□□ -1.37
RNU4-48P-201ENST00000365559 GDF10P55107 478 aa6.52□□□□□ -1.37
RNU4-48P-201ENST00000365559 TRIM50Q86XT4 487 aa6.52□□□□□ -1.37
RNU4-48P-201ENST00000365559 CCDC97Q96F63 343 aaPredicted RBP6.52□□□□□ -1.37
RNU4-48P-201ENST00000365559 XAGE2Q96GT9 111 aa6.52□□□□□ -1.37
RNU4-48P-201ENST00000365559 NLRP3Q96P20 1036 aa6.52□□□□□ -1.37
RNU4-48P-201ENST00000365559 ESYT1Q9BSJ8 1104 aa6.52□□□□□ -1.37
RNU4-48P-201ENST00000365559 SERPINA10Q9UK55 444 aa6.52□□□□□ -1.37
RNU4-48P-201ENST00000365559 HRH3Q9Y5N1 445 aa6.52□□□□□ -1.37
RNU4-48P-201ENST00000365559 TMEM229AB2RXF0 380 aa6.51□□□□□ -1.37
RNU4-48P-201ENST00000365559 INHAP05111 366 aa6.51□□□□□ -1.37
RNU4-48P-201ENST00000365559 PSME1Q06323 249 aa6.51□□□□□ -1.37
RNU4-48P-201ENST00000365559 OGFOD1Q8N543 542 aa6.51□□□□□ -1.37
RNU4-48P-201ENST00000365559 DNAAF2Q9NVR5 837 aaKnown RBP6.51□□□□□ -1.37
RNU4-48P-201ENST00000365559 RASA1P20936 1047 aa6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 CENPCQ03188 943 aa6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 CRTC2Q53ET0 693 aaPredicted RBP6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 CDCA8Q53HL2 280 aa6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 ESCO1Q5FWF5 840 aa6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 TPCN2Q8NHX9 752 aa6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 ZNF594Q96JF6 807 aaPredicted RBP6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 FHDC1Q9C0D6 1143 aaPredicted RBP6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 GRIP2Q9C0E4 1043 aa6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 VRTNQ9H8Y1 702 aa6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 SERTAD1Q9UHV2 236 aa6.5□□□□□ -1.37
RNU4-48P-201ENST00000365559 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.49□□□□□ -1.37
RNU4-48P-201ENST00000365559 WASLO00401 505 aaPredicted RBP6.49□□□□□ -1.37
RNU4-48P-201ENST00000365559 DKK1O94907 266 aa6.49□□□□□ -1.37
RNU4-48P-201ENST00000365559 GPC1P35052 558 aa6.49□□□□□ -1.37
RNU4-48P-201ENST00000365559 ATP1A2P50993 1020 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms