RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 NLRP2Q9NX02 1062 aa9.11□□□□□ -0.95
RNU1-55P-201ENST00000365510 SGIP1Q9BQI5 828 aa9.1□□□□□ -0.95
RNU1-55P-201ENST00000365510 MRS2Q9HD23 443 aa9.1□□□□□ -0.95
RNU1-55P-201ENST00000365510 OVOS2A0A0G2JMS6 1433 aa9.1□□□□□ -0.95
RNU1-55P-201ENST00000365510 PARP4Q9UKK3 1724 aaKnown RBP9.09□□□□□ -0.95
RNU1-55P-201ENST00000365510 SMG6Q86US8 1419 aaKnown RBP9.09□□□□□ -0.95
RNU1-55P-201ENST00000365510 DCAF8L1A6NGE4 600 aa9.09□□□□□ -0.95
RNU1-55P-201ENST00000365510 SMIM5Q71RC9 77 aa9.09□□□□□ -0.95
RNU1-55P-201ENST00000365510 PELP1Q8IZL8 1130 aaKnown RBP9.09□□□□□ -0.95
RNU1-55P-201ENST00000365510 DDX54Q8TDD1 881 aaKnown RBP9.09□□□□□ -0.95
RNU1-55P-201ENST00000365510 CFAP53Q96M91 514 aa9.09□□□□□ -0.95
RNU1-55P-201ENST00000365510 SLIT3O75094 1523 aa9.09□□□□□ -0.95
RNU1-55P-201ENST00000365510 LRRC37A3O60309 1634 aa9.09□□□□□ -0.95
RNU1-55P-201ENST00000365510 KCNH5Q8NCM2 988 aa9.08□□□□□ -0.96
RNU1-55P-201ENST00000365510 CASZ1Q86V15 1759 aa9.08□□□□□ -0.96
RNU1-55P-201ENST00000365510 NFAT5O94916 1531 aa9.07□□□□□ -0.96
RNU1-55P-201ENST00000365510 ANKRD24Q8TF21 1146 aa9.07□□□□□ -0.96
RNU1-55P-201ENST00000365510 ARXQ96QS3 562 aa9.07□□□□□ -0.96
RNU1-55P-201ENST00000365510 RTL1A6NKG5 1358 aa9.07□□□□□ -0.96
RNU1-55P-201ENST00000365510 KIF24Q5T7B8 1368 aa9.07□□□□□ -0.96
RNU1-55P-201ENST00000365510 SENP3-EIF4A1A0A087X0R7 540 aa9.06□□□□□ -0.96
RNU1-55P-201ENST00000365510 MTHFSP49914 203 aa9.06□□□□□ -0.96
RNU1-55P-201ENST00000365510 RRS1Q15050 365 aaKnown RBP9.06□□□□□ -0.96
RNU1-55P-201ENST00000365510 GPR162Q16538 588 aa9.06□□□□□ -0.96
RNU1-55P-201ENST00000365510 NLGN2Q8NFZ4 835 aa9.06□□□□□ -0.96
RNU1-55P-201ENST00000365510 POLKQ9UBT6 870 aa9.06□□□□□ -0.96
RNU1-55P-201ENST00000365510 WWC3Q9ULE0 1092 aa9.06□□□□□ -0.96
RNU1-55P-201ENST00000365510 FLT4P35916 1363 aa9.06□□□□□ -0.96
RNU1-55P-201ENST00000365510 PPM1GO15355 546 aaPredicted RBP9.05□□□□□ -0.96
RNU1-55P-201ENST00000365510 PRIM1P49642 420 aaKnown RBP9.05□□□□□ -0.96
RNU1-55P-201ENST00000365510 CCDC184Q52MB2 194 aa9.05□□□□□ -0.96
RNU1-55P-201ENST00000365510 MTFR1LQ9H019 292 aa9.05□□□□□ -0.96
RNU1-55P-201ENST00000365510 EMILIN1Q9Y6C2 1016 aa9.05□□□□□ -0.96
RNU1-55P-201ENST00000365510 MAP3K19Q56UN5 1328 aa9.05□□□□□ -0.96
RNU1-55P-201ENST00000365510 COL3A1P02461 1466 aaPredicted RBP9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 INSRP06213 1382 aa9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 IL2RBP14784 551 aa9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 AMPHP49418 695 aa9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 WDR43Q15061 677 aaKnown RBP eCLIP9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 MSL1Q68DK7 614 aa9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 USHBP1Q8N6Y0 703 aa9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 AKT1S1Q96B36 256 aa9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 SYTL4Q96C24 671 aaPredicted RBP9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 CDCA7Q9BWT1 371 aaPredicted RBP9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 ABCC6O95255 1503 aa9.04□□□□□ -0.96
RNU1-55P-201ENST00000365510 C1QTNF8P60827 252 aa9.03□□□□□ -0.96
RNU1-55P-201ENST00000365510 NUDCQ9Y266 331 aa9.03□□□□□ -0.96
RNU1-55P-201ENST00000365510 LTN1O94822 1766 aa9.03□□□□□ -0.96
RNU1-55P-201ENST00000365510 MAP2P11137 1827 aaKnown RBP9.03□□□□□ -0.96
RNU1-55P-201ENST00000365510 MSH5O43196 834 aa9.02□□□□□ -0.97
RNU1-55P-201ENST00000365510 DIAPH1O60610 1272 aaKnown RBP9.02□□□□□ -0.97
RNU1-55P-201ENST00000365510 YBX3P16989 372 aaKnown RBP eCLIP9.02□□□□□ -0.97
RNU1-55P-201ENST00000365510 FAM9BQ8IZU0 186 aa9.02□□□□□ -0.97
RNU1-55P-201ENST00000365510 PNISRQ8TF01 805 aaKnown RBP9.02□□□□□ -0.97
RNU1-55P-201ENST00000365510 ERBB3P21860 1342 aa9.02□□□□□ -0.97
RNU1-55P-201ENST00000365510 PNPLA7Q6ZV29 1317 aa9.02□□□□□ -0.97
RNU1-55P-201ENST00000365510 WNK3Q9BYP7 1800 aa9.01□□□□□ -0.97
RNU1-55P-201ENST00000365510 HOXC9P31274 260 aa9.01□□□□□ -0.97
RNU1-55P-201ENST00000365510 COL23A1Q86Y22 540 aaPredicted RBP9.01□□□□□ -0.97
RNU1-55P-201ENST00000365510 TFCP2L1Q9NZI6 479 aa9.01□□□□□ -0.97
RNU1-55P-201ENST00000365510 BCL9O00512 1426 aa9□□□□□ -0.97
RNU1-55P-201ENST00000365510 U2SURPO15042 1029 aaKnown RBP9□□□□□ -0.97
RNU1-55P-201ENST00000365510 AMIGO3Q86WK7 504 aa9□□□□□ -0.97
RNU1-55P-201ENST00000365510 IP6K1Q92551 441 aa9□□□□□ -0.97
RNU1-55P-201ENST00000365510 BTAF1O14981 1849 aa9□□□□□ -0.97
RNU1-55P-201ENST00000365510 UTRNP46939 3433 aa8.99□□□□□ -0.97
RNU1-55P-201ENST00000365510 U2AF1L5P0DN76 240 aaPredicted RBP8.99□□□□□ -0.97
RNU1-55P-201ENST00000365510 U2AF1Q01081 240 aaKnown RBP eCLIP8.99□□□□□ -0.97
RNU1-55P-201ENST00000365510 HSP90AB2PQ58FF8 381 aa8.99□□□□□ -0.97
RNU1-55P-201ENST00000365510 NBPF6Q5VWK0 638 aa8.99□□□□□ -0.97
RNU1-55P-201ENST00000365510 NBPF4Q96M43 638 aa8.99□□□□□ -0.97
RNU1-55P-201ENST00000365510 RGPD2P0DJD1 1756 aa8.99□□□□□ -0.97
RNU1-55P-201ENST00000365510 TNS2Q63HR2 1409 aa8.98□□□□□ -0.97
RNU1-55P-201ENST00000365510 IL13P35225 146 aa8.98□□□□□ -0.97
RNU1-55P-201ENST00000365510 EIF4A2Q14240 407 aaKnown RBP8.98□□□□□ -0.97
RNU1-55P-201ENST00000365510 ZNF526Q8TF50 670 aaPredicted RBP8.98□□□□□ -0.97
RNU1-55P-201ENST00000365510 PNNQ9H307 717 aaKnown RBP8.98□□□□□ -0.97
RNU1-55P-201ENST00000365510 CHD4Q14839 1912 aa8.97□□□□□ -0.97
RNU1-55P-201ENST00000365510 ZCRB1Q8TBF4 217 aaKnown RBP8.97□□□□□ -0.97
RNU1-55P-201ENST00000365510 YTHDC1Q96MU7 727 aaKnown RBP8.97□□□□□ -0.97
RNU1-55P-201ENST00000365510 CCNL1Q9UK58 526 aaPredicted RBP8.97□□□□□ -0.97
RNU1-55P-201ENST00000365510 NHSQ6T4R5 1651 aa8.97□□□□□ -0.97
RNU1-55P-201ENST00000365510 FAM208AQ9UK61 1670 aaKnown RBP8.97□□□□□ -0.97
RNU1-55P-201ENST00000365510 RGPD3A6NKT7 1758 aaPredicted RBP8.96□□□□□ -0.97
RNU1-55P-201ENST00000365510 RGPD4Q7Z3J3 1758 aa8.96□□□□□ -0.97
RNU1-55P-201ENST00000365510 PAPPAQ13219 1627 aa8.96□□□□□ -0.98
RNU1-55P-201ENST00000365510 NEFMP07197 916 aa8.96□□□□□ -0.98
RNU1-55P-201ENST00000365510 POLD1P28340 1107 aa8.96□□□□□ -0.98
RNU1-55P-201ENST00000365510 ADAMTS8Q9UP79 889 aa8.96□□□□□ -0.98
RNU1-55P-201ENST00000365510 IGSF1Q8N6C5 1336 aa8.96□□□□□ -0.98
RNU1-55P-201ENST00000365510 MAPK8IP3Q9UPT6 1336 aa8.96□□□□□ -0.98
RNU1-55P-201ENST00000365510 FCHSD2O94868 740 aa8.95□□□□□ -0.98
RNU1-55P-201ENST00000365510 HNRNPUQ00839 825 aaKnown RBP eCLIP8.95□□□□□ -0.98
RNU1-55P-201ENST00000365510 MPRIPQ6WCQ1 1025 aa8.95□□□□□ -0.98
RNU1-55P-201ENST00000365510 TUBGCP6Q96RT7 1819 aa8.95□□□□□ -0.98
RNU1-55P-201ENST00000365510 GIGYF1O75420 1035 aaPredicted RBP8.94□□□□□ -0.98
RNU1-55P-201ENST00000365510 HMOX1P09601 288 aa8.94□□□□□ -0.98
RNU1-55P-201ENST00000365510 SULT6B1Q6IMI4 303 aa8.94□□□□□ -0.98
RNU1-55P-201ENST00000365510 CCDC146Q8IYE0 955 aa8.94□□□□□ -0.98
RNU1-55P-201ENST00000365510 RUNDC1Q96C34 613 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms