RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 ATP5J2-PTCD1G3V325 749 aa4.49□□□□□ -1.69
RNU6-1048P-201ENST00000364054 ADAMTS2O95450 1211 aa4.49□□□□□ -1.69
RNU6-1048P-201ENST00000364054 KANK3Q6NY19 840 aa4.49□□□□□ -1.69
RNU6-1048P-201ENST00000364054 RIPOR1Q6ZS17 1223 aa4.49□□□□□ -1.69
RNU6-1048P-201ENST00000364054 WHAMMQ8TF30 809 aa4.49□□□□□ -1.69
RNU6-1048P-201ENST00000364054 NLRP3Q96P20 1036 aa4.49□□□□□ -1.69
RNU6-1048P-201ENST00000364054 CYLDQ9NQC7 956 aa4.49□□□□□ -1.69
RNU6-1048P-201ENST00000364054 NSFL1CQ9UNZ2 370 aaKnown RBP4.49□□□□□ -1.69
RNU6-1048P-201ENST00000364054 SLURP2P0DP57 97 aa4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 GTF2E1P29083 439 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 RNF144AP50876 292 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 FOXK2Q01167 660 aa4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 SRSF11Q05519 484 aaKnown RBP4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 PRICKLE2Q7Z3G6 844 aa4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 CYP2U1Q7Z449 544 aa4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 PODNQ7Z5L7 613 aa4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 BANK1Q8NDB2 785 aa4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 TRERF1Q96PN7 1200 aa4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 PCDHB9Q9Y5E1 797 aa4.48□□□□□ -1.69
RNU6-1048P-201ENST00000364054 MEN1O00255 615 aa4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 LILRA1O75019 489 aa4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 IGHA1P01876 353 aa4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 RHOQP17081 205 aa4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 NEUROD2Q15784 382 aa4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 WDR44Q5JSH3 913 aa4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 SLC27A3Q5K4L6 730 aa4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 CC2D2BQ6DHV5 1058 aa4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 OCSTAMPQ9BR26 566 aa4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 HMX1Q9NP08 348 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 DNMT3AQ9Y6K1 912 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1048P-201ENST00000364054 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
RNU6-1048P-201ENST00000364054 GSK3AP49840 483 aa4.46□□□□□ -1.7
RNU6-1048P-201ENST00000364054 NR1H3Q13133 447 aa4.46□□□□□ -1.7
RNU6-1048P-201ENST00000364054 TRIM22Q8IYM9 498 aa4.46□□□□□ -1.7
RNU6-1048P-201ENST00000364054 NEDD1Q8NHV4 660 aa4.46□□□□□ -1.7
RNU6-1048P-201ENST00000364054 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
RNU6-1048P-201ENST00000364054 DYRK1BQ9Y463 629 aa4.46□□□□□ -1.7
RNU6-1048P-201ENST00000364054 NDUFB9Q9Y6M9 179 aa4.46□□□□□ -1.7
RNU6-1048P-201ENST00000364054 PHF20L1A8MW92 1017 aa4.45□□□□□ -1.7
RNU6-1048P-201ENST00000364054 MYCP01106 439 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1048P-201ENST00000364054 FOXD4L5Q5VV16 416 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1048P-201ENST00000364054 EPS8L1Q8TE68 723 aa4.45□□□□□ -1.7
RNU6-1048P-201ENST00000364054 GAS2L1Q99501 681 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1048P-201ENST00000364054 MBIPQ9NS73 344 aa4.45□□□□□ -1.7
RNU6-1048P-201ENST00000364054 LRRC4BQ9NT99 713 aa4.45□□□□□ -1.7
RNU6-1048P-201ENST00000364054 SENP3-EIF4A1A0A087X0R7 540 aa4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 GPR25O00155 361 aa4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 GIGYF1O75420 1035 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 ARHGEF15O94989 841 aa4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 FBXO45P0C2W1 286 aa4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 ADD1P35611 737 aaKnown RBP4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 ERVK-9P63128 1117 aa4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 CLN3Q13286 438 aa4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 LYPD4Q6UWN0 246 aa4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 GTPBP3Q969Y2 492 aaKnown RBP4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 SIRT1Q96EB6 747 aa4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 TRIM34Q9BYJ4 488 aa4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 PHF24Q9UPV7 400 aa4.44□□□□□ -1.7
RNU6-1048P-201ENST00000364054 A0A1W2PRU2 124 aa4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 PIK3R2O00459 728 aa4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 SLC24A1O60721 1099 aa4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 GNRH1P01148 92 aa4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 CELA2BP08218 269 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 GAS6Q14393 721 aa4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 ESCO1Q5FWF5 840 aa4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 TAS1R3Q7RTX0 852 aa4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 BEND7Q8N7W2 519 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 GALNT6Q8NCL4 622 aa4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 IL27Q8NEV9 243 aa4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 ZNF837Q96EG3 531 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 CUEDC1Q9NWM3 386 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 PCDHB11Q9Y5F2 797 aa4.43□□□□□ -1.7
RNU6-1048P-201ENST00000364054 IGF1RP08069 1367 aa4.42□□□□□ -1.7
RNU6-1048P-201ENST00000364054 SPATA31C2B4DYI2 1134 aa4.42□□□□□ -1.7
RNU6-1048P-201ENST00000364054 MSTNO14793 375 aa4.42□□□□□ -1.7
RNU6-1048P-201ENST00000364054 MAP2K3P46734 347 aa4.42□□□□□ -1.7
RNU6-1048P-201ENST00000364054 EIF4G2P78344 907 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU6-1048P-201ENST00000364054 POU4F2Q12837 409 aa4.42□□□□□ -1.7
RNU6-1048P-201ENST00000364054 LBRQ14739 615 aaKnown RBP4.42□□□□□ -1.7
RNU6-1048P-201ENST00000364054 GNASQ5JWF2 1037 aa4.42□□□□□ -1.7
RNU6-1048P-201ENST00000364054 FBXO31Q5XUX0 539 aaPredicted RBP4.42□□□□□ -1.7
RNU6-1048P-201ENST00000364054 TIMMDC1Q9NPL8 285 aa4.42□□□□□ -1.7
RNU6-1048P-201ENST00000364054 F11P03951 625 aa4.41□□□□□ -1.7
RNU6-1048P-201ENST00000364054 CSB-PGBD3P0DP91 1061 aa4.41□□□□□ -1.7
RNU6-1048P-201ENST00000364054 BCRP11274 1271 aa4.41□□□□□ -1.7
RNU6-1048P-201ENST00000364054 MX2P20592 715 aa4.41□□□□□ -1.7
RNU6-1048P-201ENST00000364054 NBPF10Q6P3W6 841 aaKnown RBP4.41□□□□□ -1.7
RNU6-1048P-201ENST00000364054 ALYREFQ86V81 257 aaKnown RBP4.41□□□□□ -1.7
RNU6-1048P-201ENST00000364054 PGBD3Q8N328 593 aa4.41□□□□□ -1.7
RNU6-1048P-201ENST00000364054 NBPF15Q8N660 670 aa4.41□□□□□ -1.7
RNU6-1048P-201ENST00000364054 KDF1Q8NAX2 398 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1048P-201ENST00000364054 GJD4Q96KN9 370 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1048P-201ENST00000364054 A0A1B0GTH6 734 aa4.4□□□□□ -1.71
RNU6-1048P-201ENST00000364054 WASLO00401 505 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1048P-201ENST00000364054 USP4Q13107 963 aa4.4□□□□□ -1.71
RNU6-1048P-201ENST00000364054 CFHR5Q9BXR6 569 aa4.4□□□□□ -1.71
RNU6-1048P-201ENST00000364054 GRIP2Q9C0E4 1043 aa4.4□□□□□ -1.71
RNU6-1048P-201ENST00000364054 NUCKS1Q9H1E3 243 aaKnown RBP4.4□□□□□ -1.71
RNU6-1048P-201ENST00000364054 RRAGCQ9HB90 399 aa4.4□□□□□ -1.71
RNU6-1048P-201ENST00000364054 CNTNAP5Q8WYK1 1306 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms