RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 GRIN3BO60391 1043 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 SLC24A1O60721 1099 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 PTCD1O75127 700 aaKnown RBP2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 MMP10P09238 476 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 TMF1P82094 1093 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 ITPK1Q13572 414 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 SLC27A3Q5K4L6 730 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 CCDC24Q8N4L8 307 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 LINC00116Q8NCU8 138 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 SLC16A10Q8TF71 515 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 ARHGEF1Q92888 912 aaKnown RBP2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 EYA1Q99502 592 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 GPBP1L1Q9HC44 474 aaPredicted RBP2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 ATG3Q9NT62 314 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 ZNF219Q9P2Y4 722 aaPredicted RBP2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 BCS1LQ9Y276 419 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 CPSF1Q10570 1443 aaKnown RBP2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 NRAPQ86VF7 1730 aa2.13□□□□□ -2.07
RNU1-42P-201ENST00000364033 THSD7AQ9UPZ6 1657 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 A0A1W2PP64 1363 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 BRD4O60885 1362 aaPredicted RBP2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 USP31Q70CQ4 1352 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 USP47Q96K76 1375 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 NINLQ9Y2I6 1382 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 KNDC1Q76NI1 1749 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 NWD2Q9ULI1 1742 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 LOC102724428A0A0B4J2F2 783 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 ZNF316A6NFI3 1004 aaPredicted RBP2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 FCHSD2O94868 740 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 DPEP1P16444 411 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 CHRNA5P30532 468 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 SIK1P57059 783 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 CABP4P57796 275 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 SLC39A6Q13433 755 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 EIF4A2Q14240 407 aaKnown RBP2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 TRAPPC3LQ5T215 181 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 DIEXFQ68CQ4 756 aaKnown RBP2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 BICDL1Q6ZP65 573 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 AEBP1Q8IUX7 1158 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 NFATC2IPQ8NCF5 419 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 SLC4A9Q96Q91 983 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 PANK3Q9H999 370 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 RRAGCQ9HB90 399 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 LGR6Q9HBX8 967 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 NMRK2Q9NPI5 230 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 TMOD3Q9NYL9 352 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 POLKQ9UBT6 870 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 SRP68Q9UHB9 627 aaKnown RBP2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 SPG7Q9UQ90 795 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 IGSF1Q8N6C5 1336 aa2.12□□□□□ -2.07
RNU1-42P-201ENST00000364033 NSD2O96028 1365 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 ANKRD36BQ8N2N9 1353 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 PALLDQ8WX93 1383 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 RGPD1P0DJD0 1748 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 ABCA3Q99758 1704 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 ADGRB2O60241 1585 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 NRKQ7Z2Y5 1582 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 RGPD5Q99666 1765 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 FAM177BA6PVY3 158 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 KIF3CO14782 793 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 HMOX1P09601 288 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 HSPA5P11021 654 aaKnown RBP2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 PHKG2P15735 406 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 CANXP27824 592 aaKnown RBP2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 RFC4P35249 363 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 PIP4K2AP48426 406 aaPredicted RBP2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 MTHFSP49914 203 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 FKBP8Q14318 412 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 CC2D1BQ5T0F9 858 aaKnown RBP2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 C9orf131Q5VYM1 1079 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 USPL1Q5W0Q7 1092 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 SULT6B1Q6IMI4 303 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 ZNF530Q6P9A1 599 aaPredicted RBP2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 MORC1Q86VD1 984 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 DNAJC10Q8IXB1 793 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 IFNL2Q8IZJ0 200 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 NGEFQ8N5V2 710 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 SMARCC1Q92922 1105 aaPredicted RBP2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 ZNF428Q96B54 188 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 RTCBQ9Y3I0 505 aaKnown RBP2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 ZNF330Q9Y3S2 320 aaPredicted RBP2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 CD2APQ9Y5K6 639 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 PARP3Q9Y6F1 533 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 CD163L1Q9NR16 1453 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 SLIT3O75094 1523 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 ARHGEF28Q8N1W1 1705 aaKnown RBP2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 TNS1Q9HBL0 1735 aaKnown RBP2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 CACNA1AO00555 2505 aa2.11□□□□□ -2.07
RNU1-42P-201ENST00000364033 COL18A1P39060 1754 aa2.1□□□□□ -2.07
RNU1-42P-201ENST00000364033 PHRF1Q9P1Y6 1649 aaKnown RBP2.1□□□□□ -2.07
RNU1-42P-201ENST00000364033 TNS2Q63HR2 1409 aa2.1□□□□□ -2.07
RNU1-42P-201ENST00000364033 EDC4Q6P2E9 1401 aaKnown RBP2.1□□□□□ -2.07
RNU1-42P-201ENST00000364033 ATP10DQ9P241 1426 aa2.1□□□□□ -2.07
RNU1-42P-201ENST00000364033 PIK3C2AO00443 1686 aa2.1□□□□□ -2.07
RNU1-42P-201ENST00000364033 MYOM1P52179 1685 aa2.1□□□□□ -2.07
RNU1-42P-201ENST00000364033 LMO7Q8WWI1 1683 aa2.1□□□□□ -2.07
RNU1-42P-201ENST00000364033 TCERG1O14776 1098 aaKnown RBP2.1□□□□□ -2.07
RNU1-42P-201ENST00000364033 KCNQ3O43525 872 aa2.1□□□□□ -2.07
RNU1-42P-201ENST00000364033 RPS6KA4O75676 772 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms