RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 SCNN1DP51172 638 aa4.09□□□□□ -1.75
RNU6-271P-201ENST00000363858 SLFNL1Q499Z3 407 aa4.09□□□□□ -1.75
RNU6-271P-201ENST00000363858 OXLD1Q5BKU9 147 aa4.09□□□□□ -1.75
RNU6-271P-201ENST00000363858 RNF20Q5VTR2 975 aa4.09□□□□□ -1.75
RNU6-271P-201ENST00000363858 DEPDC4Q8N2C3 294 aa4.09□□□□□ -1.75
RNU6-271P-201ENST00000363858 INSM2Q96T92 566 aaPredicted RBP4.09□□□□□ -1.75
RNU6-271P-201ENST00000363858 A0A1W2PRU2 124 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 USP17L5A8MUK1 530 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 C11orf95C9JLR9 678 aaPredicted RBP4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 DKK1O94907 266 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 BMP2P12643 396 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 SKIP12755 728 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 NCOA4Q13772 614 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 NFATC2IPQ8NCF5 419 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 RNF217Q8TC41 542 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 TSEN34Q9BSV6 310 aaKnown RBP4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 RAB6BQ9NRW1 208 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 TIMELESSQ9UNS1 1208 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 KIAA1024Q9UPX6 916 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 PCDHGA11Q9Y5H2 935 aa4.08□□□□□ -1.76
RNU6-271P-201ENST00000363858 SENP3-EIF4A1A0A087X0R7 540 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 USP17L3A6NCW0 530 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 USP17L4A6NCW7 530 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 ARID3CA6NKF2 412 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 ATP5J2-PTCD1G3V325 749 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 ATP9BO43861 1147 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 CLDN10P78369 228 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 CFAP70Q5T0N1 1121 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 USP17L2Q6R6M4 530 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 USP17L1Q7RTZ2 530 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 CCDC125Q86Z20 511 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 PLEKHM2Q8IWE5 1019 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 ZNF775Q96BV0 537 aaPredicted RBP4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 ETNK1Q9HBU6 452 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 SENP2Q9HC62 589 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 ARHGEF10LQ9HCE6 1279 aa4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 MAFBQ9Y5Q3 323 aaPredicted RBP4.07□□□□□ -1.76
RNU6-271P-201ENST00000363858 PALM3A6NDB9 673 aaPredicted RBP4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 FIGNL2A6NMB9 653 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 TTLL8A6PVC2 850 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 TMEM229AB2RXF0 380 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 ZBTB7BO15156 539 aaPredicted RBP4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 SCARF1Q14162 830 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 MAP7D1Q3KQU3 841 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 CYP2U1Q7Z449 544 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 ZNF295-AS1Q8N0V1 137 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 ZNF592Q92610 1267 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 KIFC2Q96AC6 838 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 PPP1R12CQ9BZL4 782 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 FHDC1Q9C0D6 1143 aaPredicted RBP4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 TFIP11Q9UBB9 837 aaKnown RBP4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 USP3Q9Y6I4 520 aa4.06□□□□□ -1.76
RNU6-271P-201ENST00000363858 RNF144AP50876 292 aaPredicted RBP4.05□□□□□ -1.76
RNU6-271P-201ENST00000363858 SRPK2P78362 688 aaKnown RBP4.05□□□□□ -1.76
RNU6-271P-201ENST00000363858 NFX1Q12986 1120 aaKnown RBP4.05□□□□□ -1.76
RNU6-271P-201ENST00000363858 CLN3Q13286 438 aa4.05□□□□□ -1.76
RNU6-271P-201ENST00000363858 KANK4Q5T7N3 995 aaPredicted RBP4.05□□□□□ -1.76
RNU6-271P-201ENST00000363858 WWC1Q8IX03 1113 aa4.05□□□□□ -1.76
RNU6-271P-201ENST00000363858 XAGE2Q96GT9 111 aa4.05□□□□□ -1.76
RNU6-271P-201ENST00000363858 CALR3Q96L12 384 aaKnown RBP4.05□□□□□ -1.76
RNU6-271P-201ENST00000363858 GRIP2Q9C0E4 1043 aa4.05□□□□□ -1.76
RNU6-271P-201ENST00000363858 POLMQ9NP87 494 aaPredicted RBP4.05□□□□□ -1.76
RNU6-271P-201ENST00000363858 MEN1O00255 615 aa4.04□□□□□ -1.76
RNU6-271P-201ENST00000363858 GNRH1P01148 92 aa4.04□□□□□ -1.76
RNU6-271P-201ENST00000363858 VEGFBP49765 207 aa4.04□□□□□ -1.76
RNU6-271P-201ENST00000363858 EPHA4P54764 986 aa4.04□□□□□ -1.76
RNU6-271P-201ENST00000363858 GTF2IP78347 998 aa4.04□□□□□ -1.76
RNU6-271P-201ENST00000363858 USP4Q13107 963 aa4.04□□□□□ -1.76
RNU6-271P-201ENST00000363858 C14orf37Q86TY3 774 aa4.04□□□□□ -1.76
RNU6-271P-201ENST00000363858 ERBB4Q15303 1308 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 SLC35F4A4IF30 521 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 WASLO00401 505 aaPredicted RBP4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 UPP2O95045 317 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 MYCP01106 439 aaPredicted RBP4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 THBS1P07996 1170 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 RHOQP17081 205 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 GDF10P55107 478 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 CENPCQ03188 943 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 PTSQ03393 145 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 EML3Q32P44 896 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 CRTC2Q53ET0 693 aaPredicted RBP4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 CNKSR1Q969H4 720 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 ESYT1Q9BSJ8 1104 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 ZNF358Q9NW07 568 aa4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 CUEDC1Q9NWM3 386 aaPredicted RBP4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 IQSEC3Q9UPP2 1182 aaPredicted RBP4.03□□□□□ -1.76
RNU6-271P-201ENST00000363858 H3BM21 787 aa4.02□□□□□ -1.77
RNU6-271P-201ENST00000363858 TERTO14746 1132 aaKnown RBP4.02□□□□□ -1.77
RNU6-271P-201ENST00000363858 MAN1A2O60476 641 aa4.02□□□□□ -1.77
RNU6-271P-201ENST00000363858 INHAP05111 366 aa4.02□□□□□ -1.77
RNU6-271P-201ENST00000363858 GPC1P35052 558 aa4.02□□□□□ -1.77
RNU6-271P-201ENST00000363858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.02□□□□□ -1.77
RNU6-271P-201ENST00000363858 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNU6-271P-201ENST00000363858 ARXQ96QS3 562 aa4.02□□□□□ -1.77
RNU6-271P-201ENST00000363858 MKRN1Q9UHC7 482 aaKnown RBP4.02□□□□□ -1.77
RNU6-271P-201ENST00000363858 NOD1Q9Y239 953 aa4.02□□□□□ -1.77
RNU6-271P-201ENST00000363858 SFI1A8K8P3 1242 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 SPATA31C2B4DYI2 1134 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 LZTS3O60299 673 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms