RNA–Protein interactions for RNA: ENST00000362025.9

RAB3IP-202, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-202ENST00000362025 LRRC4BQ9NT99 713 aa23.48■■□□□ 1.35
RAB3IP-202ENST00000362025 INSRP06213 1382 aa23.47■■□□□ 1.35
RAB3IP-202ENST00000362025 FLT4P35916 1363 aa23.47■■□□□ 1.35
RAB3IP-202ENST00000362025 KAT6BQ8WYB5 2073 aa23.46■■□□□ 1.35
RAB3IP-202ENST00000362025 POLR3GLQ9BT43 218 aa23.46■■□□□ 1.35
RAB3IP-202ENST00000362025 PTGER2P43116 358 aa23.45■■□□□ 1.35
RAB3IP-202ENST00000362025 RAPGEF4Q8WZA2 1011 aa23.45■■□□□ 1.35
RAB3IP-202ENST00000362025 EMILIN1Q9Y6C2 1016 aa23.45■■□□□ 1.35
RAB3IP-202ENST00000362025 ZNF827Q17R98 1081 aa23.45■■□□□ 1.34
RAB3IP-202ENST00000362025 PAPPAQ13219 1627 aa23.44■■□□□ 1.34
RAB3IP-202ENST00000362025 KIF24Q5T7B8 1368 aa23.43■■□□□ 1.34
RAB3IP-202ENST00000362025 CGNL1Q0VF96 1302 aa23.43■■□□□ 1.34
RAB3IP-202ENST00000362025 TATP17735 454 aaPredicted RBP23.42■■□□□ 1.34
RAB3IP-202ENST00000362025 CCER1Q8TC90 406 aaPredicted RBP23.42■■□□□ 1.34
RAB3IP-202ENST00000362025 MTFR1LQ9H019 292 aa23.42■■□□□ 1.34
RAB3IP-202ENST00000362025 SHANK3Q9BYB0 1731 aa23.42■■□□□ 1.34
RAB3IP-202ENST00000362025 NSD2O96028 1365 aa23.42■■□□□ 1.34
RAB3IP-202ENST00000362025 PPM1GO15355 546 aaPredicted RBP23.42■■□□□ 1.34
RAB3IP-202ENST00000362025 KCNQ4P56696 695 aa23.42■■□□□ 1.34
RAB3IP-202ENST00000362025 SLC27A3Q5K4L6 730 aa23.42■■□□□ 1.34
RAB3IP-202ENST00000362025 DOT1LQ8TEK3 1739 aa23.41■■□□□ 1.34
RAB3IP-202ENST00000362025 HSPA5P11021 654 aaKnown RBP23.39■■□□□ 1.34
RAB3IP-202ENST00000362025 EIF4G2P78344 907 aaKnown RBP eCLIP23.39■■□□□ 1.34
RAB3IP-202ENST00000362025 AKT1S1Q96B36 256 aa23.39■■□□□ 1.34
RAB3IP-202ENST00000362025 SGIP1Q9BQI5 828 aa23.37■■□□□ 1.33
RAB3IP-202ENST00000362025 DCAF8L1A6NGE4 600 aa23.36■■□□□ 1.33
RAB3IP-202ENST00000362025 PCDH11XQ9BZA7 1347 aa23.36■■□□□ 1.33
RAB3IP-202ENST00000362025 PCDH11YQ9BZA8 1340 aa23.36■■□□□ 1.33
RAB3IP-202ENST00000362025 FHDC1Q9C0D6 1143 aaPredicted RBP23.35■■□□□ 1.33
RAB3IP-202ENST00000362025 WASHC2AQ641Q2 1341 aa23.34■■□□□ 1.33
RAB3IP-202ENST00000362025 CCNL1Q9UK58 526 aaPredicted RBP23.34■■□□□ 1.33
RAB3IP-202ENST00000362025 TNNT2P45379 298 aaPredicted RBP23.34■■□□□ 1.33
RAB3IP-202ENST00000362025 POLKQ9UBT6 870 aa23.34■■□□□ 1.33
RAB3IP-202ENST00000362025 CYP27B1O15528 508 aa23.33■■□□□ 1.33
RAB3IP-202ENST00000362025 TFCP2L1Q9NZI6 479 aa23.33■■□□□ 1.33
RAB3IP-202ENST00000362025 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.32
RAB3IP-202ENST00000362025 YY1P25490 414 aa23.32■■□□□ 1.32
RAB3IP-202ENST00000362025 SYT17Q9BSW7 474 aa23.32■■□□□ 1.32
RAB3IP-202ENST00000362025 ARXQ96QS3 562 aa23.31■■□□□ 1.32
RAB3IP-202ENST00000362025 PANK3Q9H999 370 aa23.31■■□□□ 1.32
RAB3IP-202ENST00000362025 EYA1Q99502 592 aa23.31■■□□□ 1.32
RAB3IP-202ENST00000362025 NCAPD2Q15021 1401 aa23.3■■□□□ 1.32
RAB3IP-202ENST00000362025 LY75O60449 1722 aa23.3■■□□□ 1.32
RAB3IP-202ENST00000362025 MPRIPQ6WCQ1 1025 aa23.29■■□□□ 1.32
RAB3IP-202ENST00000362025 ANKRD26Q9UPS8 1709 aa23.29■■□□□ 1.32
RAB3IP-202ENST00000362025 SLC16A10Q8TF71 515 aa23.28■■□□□ 1.32
RAB3IP-202ENST00000362025 SPG7Q9UQ90 795 aa23.27■■□□□ 1.32
RAB3IP-202ENST00000362025 MAP2P11137 1827 aaKnown RBP23.26■■□□□ 1.31
RAB3IP-202ENST00000362025 EIF4A2Q14240 407 aaKnown RBP23.26■■□□□ 1.31
RAB3IP-202ENST00000362025 PALLDQ8WX93 1383 aa23.25■■□□□ 1.31
RAB3IP-202ENST00000362025 PKD1L3Q7Z443 1732 aa23.24■■□□□ 1.31
RAB3IP-202ENST00000362025 QSER1Q2KHR3 1735 aa23.24■■□□□ 1.31
RAB3IP-202ENST00000362025 POLD1P28340 1107 aa23.23■■□□□ 1.31
RAB3IP-202ENST00000362025 NKX1-1Q15270 411 aaPredicted RBP23.23■■□□□ 1.31
RAB3IP-202ENST00000362025 TUBGCP6Q96RT7 1819 aa23.23■■□□□ 1.31
RAB3IP-202ENST00000362025 MSH5O43196 834 aa23.23■■□□□ 1.31
RAB3IP-202ENST00000362025 TOGARAM1Q9Y4F4 1720 aa23.22■■□□□ 1.31
RAB3IP-202ENST00000362025 COL23A1Q86Y22 540 aaPredicted RBP23.22■■□□□ 1.31
RAB3IP-202ENST00000362025 PIGBQ92521 554 aa23.22■■□□□ 1.31
RAB3IP-202ENST00000362025 KLHL34Q8N239 644 aa23.21■■□□□ 1.31
RAB3IP-202ENST00000362025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.21■■□□□ 1.311e-6■■□□□ 13.1
RAB3IP-202ENST00000362025 MAP3K5Q99683 1374 aa23.21■■□□□ 1.31
RAB3IP-202ENST00000362025 SMARCC1Q92922 1105 aaPredicted RBP23.2■■□□□ 1.3
RAB3IP-202ENST00000362025 PHKG2P15735 406 aa23.18■■□□□ 1.3
RAB3IP-202ENST00000362025 MORC1Q86VD1 984 aa23.18■■□□□ 1.3
RAB3IP-202ENST00000362025 IFNL2Q8IZJ0 200 aa23.18■■□□□ 1.3
RAB3IP-202ENST00000362025 IGSF1Q8N6C5 1336 aa23.17■■□□□ 1.3
RAB3IP-202ENST00000362025 TMOD3Q9NYL9 352 aa23.17■■□□□ 1.3
RAB3IP-202ENST00000362025 ITGB4P16144 1822 aa23.16■■□□□ 1.3
RAB3IP-202ENST00000362025 C5P01031 1676 aa23.16■■□□□ 1.3
RAB3IP-202ENST00000362025 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
RAB3IP-202ENST00000362025 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
RAB3IP-202ENST00000362025 COL24A1Q17RW2 1714 aa23.15■■□□□ 1.3
RAB3IP-202ENST00000362025 HMGB2P26583 209 aaKnown RBP23.14■■□□□ 1.29
RAB3IP-202ENST00000362025 ASAP1Q9ULH1 1129 aa23.13■■□□□ 1.29
RAB3IP-202ENST00000362025 AK7Q96M32 723 aa23.13■■□□□ 1.29
RAB3IP-202ENST00000362025 LOC102724428A0A0B4J2F2 783 aa23.12■■□□□ 1.29
RAB3IP-202ENST00000362025 SIK1P57059 783 aa23.12■■□□□ 1.29
RAB3IP-202ENST00000362025 GPR162Q16538 588 aa23.12■■□□□ 1.29
RAB3IP-202ENST00000362025 FLAD1Q8NFF5 587 aa23.12■■□□□ 1.29
RAB3IP-202ENST00000362025 KIF7Q2M1P5 1343 aa23.12■■□□□ 1.29
RAB3IP-202ENST00000362025 AMIGO3Q86WK7 504 aa23.12■■□□□ 1.29
RAB3IP-202ENST00000362025 NLGN2Q8NFZ4 835 aa23.12■■□□□ 1.29
RAB3IP-202ENST00000362025 SMIM5Q71RC9 77 aa23.11■■□□□ 1.29
RAB3IP-202ENST00000362025 TAF1LQ8IZX4 1826 aa23.1■■□□□ 1.29
RAB3IP-202ENST00000362025 C4BP0C0L5 1744 aa23.1■■□□□ 1.29
RAB3IP-202ENST00000362025 PLEKHG2Q9H7P9 1386 aa23.1■■□□□ 1.29
RAB3IP-202ENST00000362025 PLEKHO1Q53GL0 409 aaPredicted RBP23.1■■□□□ 1.29
RAB3IP-202ENST00000362025 AEBP1Q8IUX7 1158 aa23.1■■□□□ 1.29
RAB3IP-202ENST00000362025 LINC00116Q8NCU8 138 aa23.1■■□□□ 1.29
RAB3IP-202ENST00000362025 PHF14O94880 888 aa23.09■■□□□ 1.29
RAB3IP-202ENST00000362025 PELP1Q8IZL8 1130 aaKnown RBP23.09■■□□□ 1.29
RAB3IP-202ENST00000362025 ATG3Q9NT62 314 aa23.09■■□□□ 1.29
RAB3IP-202ENST00000362025 AMER1Q5JTC6 1135 aaPredicted RBP23.09■■□□□ 1.29
RAB3IP-202ENST00000362025 ITPK1Q13572 414 aa23.08■■□□□ 1.29
RAB3IP-202ENST00000362025 ZNF530Q6P9A1 599 aaPredicted RBP23.08■■□□□ 1.29
RAB3IP-202ENST00000362025 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.07■■□□□ 1.28
RAB3IP-202ENST00000362025 ATP6V1AP38606 617 aa23.07■■□□□ 1.28
RAB3IP-202ENST00000362025 ZEB1P37275 1124 aaPredicted RBP23.06■■□□□ 1.28
RAB3IP-202ENST00000362025 DCAF5Q96JK2 942 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms