RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 MAP7D2Q96T17 732 aa16.43■□□□□ 0.22
SGMS1-202ENST00000361781 TARBP1Q13395 1621 aaKnown RBP16.43■□□□□ 0.22
SGMS1-202ENST00000361781 EIF2AK4Q9P2K8 1649 aaKnown RBP16.43■□□□□ 0.22
SGMS1-202ENST00000361781 PLCH2O75038 1416 aa16.42■□□□□ 0.22
SGMS1-202ENST00000361781 C17orf53Q8N3J3 647 aaPredicted RBP16.42■□□□□ 0.22
SGMS1-202ENST00000361781 USP26Q9BXU7 913 aa16.42■□□□□ 0.22
SGMS1-202ENST00000361781 SIL1Q9H173 461 aa16.42■□□□□ 0.22
SGMS1-202ENST00000361781 LRRFIP2Q9Y608 721 aaKnown RBP16.42■□□□□ 0.22
SGMS1-202ENST00000361781 RUFY2Q8WXA3 655 aa16.42■□□□□ 0.22
SGMS1-202ENST00000361781 RPGRIP1LQ68CZ1 1315 aa16.42■□□□□ 0.22
SGMS1-202ENST00000361781 ADGBQ8N7X0 1667 aa16.42■□□□□ 0.22
SGMS1-202ENST00000361781 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.42■□□□□ 0.22
SGMS1-202ENST00000361781 IL16Q14005 1332 aa16.42■□□□□ 0.22
SGMS1-202ENST00000361781 CASTP20810 708 aaKnown RBP16.41■□□□□ 0.22
SGMS1-202ENST00000361781 CCDC30Q5VVM6 783 aa16.41■□□□□ 0.22
SGMS1-202ENST00000361781 JAKMIP1Q96N16 626 aaKnown RBP16.41■□□□□ 0.22
SGMS1-202ENST00000361781 SLC52A1Q9NWF4 448 aa16.41■□□□□ 0.22
SGMS1-202ENST00000361781 GSPT1P15170 499 aaKnown RBP16.41■□□□□ 0.22
SGMS1-202ENST00000361781 CCT4P50991 539 aaKnown RBP16.41■□□□□ 0.22
SGMS1-202ENST00000361781 SF3A1Q15459 793 aaKnown RBP16.41■□□□□ 0.22
SGMS1-202ENST00000361781 SLC26A8Q96RN1 970 aa16.41■□□□□ 0.22
SGMS1-202ENST00000361781 NRDCO43847 1150 aa16.41■□□□□ 0.22
SGMS1-202ENST00000361781 PPFIA3O75145 1194 aa16.41■□□□□ 0.22
SGMS1-202ENST00000361781 KDM4AO75164 1064 aa16.41■□□□□ 0.22
SGMS1-202ENST00000361781 GIMAP6Q6P9H5 292 aa16.41■□□□□ 0.22
SGMS1-202ENST00000361781 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
SGMS1-202ENST00000361781 CLASRPQ8N2M8 674 aaKnown RBP16.41■□□□□ 0.22
SGMS1-202ENST00000361781 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 LRSAM1Q6UWE0 723 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 FMNL2Q96PY5 1086 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 ANXA1P04083 346 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 PDE1AP54750 535 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 ANKRD44Q8N8A2 993 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 FANCAO15360 1455 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 SPDYE4A6NLX3 237 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 FOXO3O43524 673 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 OFD1O75665 1012 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 TCEANC2Q96MN5 208 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 DCTPP1Q9H773 170 aa16.4■□□□□ 0.22
SGMS1-202ENST00000361781 SASS6Q6UVJ0 657 aa16.39■□□□□ 0.21
SGMS1-202ENST00000361781 CKAP2LQ8IYA6 745 aa16.39■□□□□ 0.21
SGMS1-202ENST00000361781 IGSF3O75054 1194 aa16.39■□□□□ 0.21
SGMS1-202ENST00000361781 ADCY5O95622 1261 aa16.39■□□□□ 0.21
SGMS1-202ENST00000361781 GNL2Q13823 731 aaKnown RBP16.39■□□□□ 0.21
SGMS1-202ENST00000361781 CEP170Q5SW79 1584 aa16.39■□□□□ 0.21
SGMS1-202ENST00000361781 LARP1BQ659C4 914 aaKnown RBP16.39■□□□□ 0.21
SGMS1-202ENST00000361781 ZKSCAN5Q9Y2L8 839 aa16.39■□□□□ 0.21
SGMS1-202ENST00000361781 CPA1P15085 419 aa16.38■□□□□ 0.21
SGMS1-202ENST00000361781 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
SGMS1-202ENST00000361781 CNPY2Q9Y2B0 182 aa16.38■□□□□ 0.21
SGMS1-202ENST00000361781 USHBP1Q8N6Y0 703 aa16.38■□□□□ 0.21
SGMS1-202ENST00000361781 TMEM63CQ9P1W3 806 aa16.38■□□□□ 0.21
SGMS1-202ENST00000361781 TFIP11Q9UBB9 837 aaKnown RBP16.38■□□□□ 0.21
SGMS1-202ENST00000361781 FSD1Q9BTV5 496 aa16.37■□□□□ 0.21
SGMS1-202ENST00000361781 LMBRD1Q9NUN5 540 aa16.37■□□□□ 0.21
SGMS1-202ENST00000361781 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
SGMS1-202ENST00000361781 PRPF40BQ6NWY9 871 aaKnown RBP16.37■□□□□ 0.21
SGMS1-202ENST00000361781 G2E3Q7L622 706 aa16.37■□□□□ 0.21
SGMS1-202ENST00000361781 USP48Q86UV5 1035 aa16.37■□□□□ 0.21
SGMS1-202ENST00000361781 UGGT1Q9NYU2 1555 aa16.37■□□□□ 0.21
SGMS1-202ENST00000361781 ARHGAP45Q92619 1136 aa16.37■□□□□ 0.21
SGMS1-202ENST00000361781 ERVK-7P63135 1459 aa16.37■□□□□ 0.21
SGMS1-202ENST00000361781 EIF4G3O43432 1585 aaKnown RBP16.37■□□□□ 0.21
SGMS1-202ENST00000361781 HTATSF1O43719 755 aaKnown RBP16.36■□□□□ 0.21
SGMS1-202ENST00000361781 TPD52L1Q16890 204 aaPredicted RBP16.36■□□□□ 0.21
SGMS1-202ENST00000361781 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
SGMS1-202ENST00000361781 HMGN5P82970 282 aaKnown RBP16.36■□□□□ 0.21
SGMS1-202ENST00000361781 SRCIN1Q9C0H9 1055 aa16.35■□□□□ 0.21
SGMS1-202ENST00000361781 DDX11Q96FC9 970 aa16.35■□□□□ 0.21
SGMS1-202ENST00000361781 FILIP1Q7Z7B0 1213 aa16.35■□□□□ 0.21
SGMS1-202ENST00000361781 NECAB1Q8N987 351 aa16.35■□□□□ 0.21
SGMS1-202ENST00000361781 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
SGMS1-202ENST00000361781 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
SGMS1-202ENST00000361781 SIRT2Q8IXJ6 389 aa16.34■□□□□ 0.21
SGMS1-202ENST00000361781 CCAR2Q8N163 923 aaKnown RBP16.34■□□□□ 0.21
SGMS1-202ENST00000361781 NSD2O96028 1365 aa16.34■□□□□ 0.21
SGMS1-202ENST00000361781 CCDC192P0DO97 292 aa16.34■□□□□ 0.21
SGMS1-202ENST00000361781 FLIIQ13045 1269 aa16.34■□□□□ 0.21
SGMS1-202ENST00000361781 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
SGMS1-202ENST00000361781 PRDM15P57071 1507 aaPredicted RBP16.34■□□□□ 0.21
SGMS1-202ENST00000361781 MTERF4Q7Z6M4 381 aaKnown RBP16.34■□□□□ 0.21
SGMS1-202ENST00000361781 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
SGMS1-202ENST00000361781 GADD45BO75293 160 aaPredicted RBP16.33■□□□□ 0.21
SGMS1-202ENST00000361781 CSB-PGBD3P0DP91 1061 aa16.33■□□□□ 0.21
SGMS1-202ENST00000361781 ESYT1Q9BSJ8 1104 aa16.33■□□□□ 0.21
SGMS1-202ENST00000361781 FAM69CQ0P6D2 419 aa16.33■□□□□ 0.2
SGMS1-202ENST00000361781 C16orf45Q96MC5 204 aaPredicted RBP16.33■□□□□ 0.2
SGMS1-202ENST00000361781 CREBRFQ8IUR6 639 aa16.33■□□□□ 0.2
SGMS1-202ENST00000361781 PLEKHF1Q96S99 279 aa16.33■□□□□ 0.2
SGMS1-202ENST00000361781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
SGMS1-202ENST00000361781 DNAJC2Q99543 621 aaKnown RBP16.32■□□□□ 0.2
SGMS1-202ENST00000361781 CCDC183Q5T5S1 534 aa16.32■□□□□ 0.2
SGMS1-202ENST00000361781 ABTB2Q8N961 1025 aa16.32■□□□□ 0.2
SGMS1-202ENST00000361781 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
SGMS1-202ENST00000361781 TAF7Q15545 349 aaPredicted RBP16.32■□□□□ 0.2
SGMS1-202ENST00000361781 GPT2Q8TD30 523 aa16.32■□□□□ 0.2
SGMS1-202ENST00000361781 SAMD9LQ8IVG5 1584 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 RNF20Q5VTR2 975 aa16.31■□□□□ 0.2
SGMS1-202ENST00000361781 AACSQ86V21 672 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms