RNA–Protein interactions for RNA: ENST00000361762.3

PCDH7-201, Transcript of protocadherin 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH7, Length 6,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-201ENST00000361762 ARAP1Q96P48 1450 aa20.54■□□□□ 0.88
PCDH7-201ENST00000361762 PTCD1O75127 700 aaKnown RBP20.54■□□□□ 0.88
PCDH7-201ENST00000361762 NUTM1Q86Y26 1132 aa20.54■□□□□ 0.88
PCDH7-201ENST00000361762 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
PCDH7-201ENST00000361762 ZNF692Q9BU19 519 aaPredicted RBP20.54■□□□□ 0.88
PCDH7-201ENST00000361762 TXLNAP40222 546 aa20.54■□□□□ 0.88
PCDH7-201ENST00000361762 GCC1Q96CN9 775 aa20.54■□□□□ 0.88
PCDH7-201ENST00000361762 MCM2P49736 904 aa20.53■□□□□ 0.88
PCDH7-201ENST00000361762 WWC2Q6AWC2 1192 aa20.53■□□□□ 0.88
PCDH7-201ENST00000361762 MCM10Q7L590 875 aa20.53■□□□□ 0.88
PCDH7-201ENST00000361762 PPP4R3BQ5MIZ7 849 aa20.53■□□□□ 0.88
PCDH7-201ENST00000361762 TDO2P48775 406 aa20.52■□□□□ 0.88
PCDH7-201ENST00000361762 ZNF396Q96N95 335 aaPredicted RBP20.52■□□□□ 0.87
PCDH7-201ENST00000361762 WDR33Q9C0J8 1336 aaKnown RBP20.51■□□□□ 0.87
PCDH7-201ENST00000361762 CAMK4Q16566 473 aa20.51■□□□□ 0.87
PCDH7-201ENST00000361762 NACAP1Q9BZK3 213 aa20.51■□□□□ 0.87
PCDH7-201ENST00000361762 TANGO6Q9C0B7 1094 aa20.51■□□□□ 0.87
PCDH7-201ENST00000361762 ME1P48163 572 aa20.51■□□□□ 0.87
PCDH7-201ENST00000361762 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
PCDH7-201ENST00000361762 MPHOSPH10O00566 681 aaKnown RBP20.5■□□□□ 0.87
PCDH7-201ENST00000361762 POLR3GO15318 223 aaPredicted RBP20.5■□□□□ 0.87
PCDH7-201ENST00000361762 ADAMTS2O95450 1211 aa20.5■□□□□ 0.87
PCDH7-201ENST00000361762 GIMAP7Q8NHV1 300 aa20.5■□□□□ 0.87
PCDH7-201ENST00000361762 IDH1O75874 414 aaKnown RBP20.5■□□□□ 0.87
PCDH7-201ENST00000361762 C20orf194Q5TEA3 1177 aa20.5■□□□□ 0.87
PCDH7-201ENST00000361762 SMARCE1Q969G3 411 aa20.5■□□□□ 0.87
PCDH7-201ENST00000361762 ZFP91Q96JP5 570 aaPredicted RBP20.5■□□□□ 0.87
PCDH7-201ENST00000361762 EIF3JO75822 258 aaKnown RBP20.5■□□□□ 0.87
PCDH7-201ENST00000361762 USP5P45974 858 aa20.5■□□□□ 0.87
PCDH7-201ENST00000361762 SYCP1Q15431 976 aa20.5■□□□□ 0.87
PCDH7-201ENST00000361762 IPO4Q8TEX9 1081 aaKnown RBP20.5■□□□□ 0.87
PCDH7-201ENST00000361762 BBXQ8WY36 941 aaPredicted RBP20.5■□□□□ 0.87
PCDH7-201ENST00000361762 KIAA1107Q9UPP5 1409 aa20.5■□□□□ 0.87
PCDH7-201ENST00000361762 SSBP05455 408 aaKnown RBP eCLIP20.49■□□□□ 0.87
PCDH7-201ENST00000361762 LRP2BPQ9P2M1 347 aa20.49■□□□□ 0.87
PCDH7-201ENST00000361762 CHD1LQ86WJ1 897 aa20.49■□□□□ 0.87
PCDH7-201ENST00000361762 FILIP1LQ4L180 1135 aa20.49■□□□□ 0.87
PCDH7-201ENST00000361762 ATF7IPQ6VMQ6 1270 aa20.48■□□□□ 0.87
PCDH7-201ENST00000361762 ABCF2Q9UG63 623 aa20.48■□□□□ 0.87
PCDH7-201ENST00000361762 NUDT16Q96DE0 195 aaKnown RBP20.48■□□□□ 0.87
PCDH7-201ENST00000361762 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
PCDH7-201ENST00000361762 SMARCA5O60264 1052 aaPredicted RBP20.48■□□□□ 0.87
PCDH7-201ENST00000361762 JAKMIP1Q96N16 626 aaKnown RBP20.48■□□□□ 0.87
PCDH7-201ENST00000361762 ZNF219Q9P2Y4 722 aaPredicted RBP20.48■□□□□ 0.87
PCDH7-201ENST00000361762 USP8P40818 1118 aa20.47■□□□□ 0.87
PCDH7-201ENST00000361762 SOGA3Q5TF21 947 aa20.47■□□□□ 0.87
PCDH7-201ENST00000361762 TRIM22Q8IYM9 498 aa20.47■□□□□ 0.87
PCDH7-201ENST00000361762 PDCP20941 246 aa20.47■□□□□ 0.87
PCDH7-201ENST00000361762 GTF2F1P35269 517 aaKnown RBP eCLIP20.47■□□□□ 0.87
PCDH7-201ENST00000361762 CIZ1Q9ULV3 898 aaPredicted RBP20.47■□□□□ 0.87
PCDH7-201ENST00000361762 ERLIN1O75477 346 aa20.47■□□□□ 0.87
PCDH7-201ENST00000361762 CHMP4BP1P59074 171 aa20.47■□□□□ 0.87
PCDH7-201ENST00000361762 MVPQ14764 893 aaKnown RBP20.47■□□□□ 0.87
PCDH7-201ENST00000361762 NSD3Q9BZ95 1437 aa20.46■□□□□ 0.87
PCDH7-201ENST00000361762 GNAT3A8MTJ3 354 aa20.46■□□□□ 0.87
PCDH7-201ENST00000361762 LARP1BQ659C4 914 aaKnown RBP20.46■□□□□ 0.87
PCDH7-201ENST00000361762 SSFA2P28290 1259 aa20.46■□□□□ 0.87
PCDH7-201ENST00000361762 NUP62CLQ9H1M0 184 aa20.46■□□□□ 0.87
PCDH7-201ENST00000361762 EXOC6BQ9Y2D4 811 aa20.46■□□□□ 0.87
PCDH7-201ENST00000361762 MATR3P43243 847 aaKnown RBP eCLIP20.45■□□□□ 0.86
PCDH7-201ENST00000361762 KRT85P78386 507 aa20.45■□□□□ 0.86
PCDH7-201ENST00000361762 DDX11Q96FC9 970 aa20.45■□□□□ 0.86
PCDH7-201ENST00000361762 ERICH3Q5RHP9 1530 aa20.45■□□□□ 0.86
PCDH7-201ENST00000361762 PDRG1Q9NUG6 133 aa20.45■□□□□ 0.86
PCDH7-201ENST00000361762 GOLGA6L10A6NI86 522 aa20.45■□□□□ 0.86
PCDH7-201ENST00000361762 TNNT1P13805 278 aa20.44■□□□□ 0.86
PCDH7-201ENST00000361762 MRC2Q9UBG0 1479 aa20.44■□□□□ 0.86
PCDH7-201ENST00000361762 TMCO3Q6UWJ1 677 aa20.44■□□□□ 0.86
PCDH7-201ENST00000361762 SEPT11Q9NVA2 429 aaKnown RBP20.44■□□□□ 0.86
PCDH7-201ENST00000361762 UBXN4Q92575 508 aa20.44■□□□□ 0.86
PCDH7-201ENST00000361762 SPATA32Q96LK8 384 aa20.44■□□□□ 0.86
PCDH7-201ENST00000361762 EHBP1L1Q8N3D4 1523 aa20.44■□□□□ 0.86
PCDH7-201ENST00000361762 TBC1D2Q9BYX2 928 aa20.44■□□□□ 0.86
PCDH7-201ENST00000361762 CEP126Q9P2H0 1117 aa20.44■□□□□ 0.86
PCDH7-201ENST00000361762 MYD88Q99836 296 aa20.44■□□□□ 0.86
PCDH7-201ENST00000361762 IGHMBP2P38935 993 aaKnown RBP20.43■□□□□ 0.86
PCDH7-201ENST00000361762 PPFIBP1Q86W92 1011 aa20.43■□□□□ 0.86
PCDH7-201ENST00000361762 UBAC1Q9BSL1 405 aa20.43■□□□□ 0.86
PCDH7-201ENST00000361762 CALCOCO1Q9P1Z2 691 aa20.43■□□□□ 0.86
PCDH7-201ENST00000361762 CDK13Q14004 1512 aaKnown RBP20.43■□□□□ 0.86
PCDH7-201ENST00000361762 MPRIPQ6WCQ1 1025 aa20.43■□□□□ 0.86
PCDH7-201ENST00000361762 TICAM2Q86XR7 235 aa20.43■□□□□ 0.86
PCDH7-201ENST00000361762 TMEM57Q8N5G2 664 aa20.43■□□□□ 0.86
PCDH7-201ENST00000361762 TNPO1Q92973 898 aaKnown RBP20.43■□□□□ 0.86
PCDH7-201ENST00000361762 METTL24Q5JXM2 366 aa20.43■□□□□ 0.86
PCDH7-201ENST00000361762 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
PCDH7-201ENST00000361762 ZNF76P36508 570 aa20.42■□□□□ 0.86
PCDH7-201ENST00000361762 SLC52A1Q9NWF4 448 aa20.42■□□□□ 0.86
PCDH7-201ENST00000361762 USP25Q9UHP3 1055 aa20.42■□□□□ 0.86
PCDH7-201ENST00000361762 HFM1A2PYH4 1435 aa20.42■□□□□ 0.86
PCDH7-201ENST00000361762 TAX1BP1Q86VP1 789 aa20.41■□□□□ 0.86
PCDH7-201ENST00000361762 WDR63Q8IWG1 891 aa20.41■□□□□ 0.86
PCDH7-201ENST00000361762 ZSCAN25Q6NSZ9 544 aa20.41■□□□□ 0.86
PCDH7-201ENST00000361762 BLOC1S2Q6QNY1 142 aa20.41■□□□□ 0.86
PCDH7-201ENST00000361762 TMX1Q9H3N1 280 aa20.41■□□□□ 0.86
PCDH7-201ENST00000361762 CCDC181Q5TID7 509 aa20.4■□□□□ 0.86
PCDH7-201ENST00000361762 DUSP27Q5VZP5 1158 aa20.4■□□□□ 0.86
PCDH7-201ENST00000361762 C16orf45Q96MC5 204 aaPredicted RBP20.4■□□□□ 0.86
PCDH7-201ENST00000361762 HECW1Q76N89 1606 aa20.4■□□□□ 0.86
PCDH7-201ENST00000361762 PTPN14Q15678 1187 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms