RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PZPP20742 1482 aa18.94■□□□□ 0.62
CLSTN1-201ENST00000361311 IGSF3O75054 1194 aa18.94■□□□□ 0.62
CLSTN1-201ENST00000361311 UBE2HP62256 183 aa18.94■□□□□ 0.62
CLSTN1-201ENST00000361311 CCDC70Q6NSX1 233 aa18.94■□□□□ 0.62
CLSTN1-201ENST00000361311 TRERF1Q96PN7 1200 aa18.94■□□□□ 0.62
CLSTN1-201ENST00000361311 ANKRD1Q15327 319 aa18.94■□□□□ 0.62
CLSTN1-201ENST00000361311 CKAP2LQ8IYA6 745 aa18.94■□□□□ 0.62
CLSTN1-201ENST00000361311 ARHGEF12Q9NZN5 1544 aa18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 KIF2AO00139 706 aaPredicted RBP18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 GIMAP6Q6P9H5 292 aa18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 CLIP2Q9UDT6 1046 aa18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 HOOK1Q9UJC3 728 aaKnown RBP18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 IL16Q14005 1332 aa18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 POLR3AO14802 1390 aaPredicted RBP18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 NEXNQ0ZGT2 675 aa18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 CEP57L1Q8IYX8 460 aa18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 PPP1R9BQ96SB3 815 aa18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 TOMM22Q9NS69 142 aa18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 OLFM4Q6UX06 510 aa18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 RASSF8Q8NHQ8 419 aa18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 GPATCH8Q9UKJ3 1502 aaKnown RBP18.93■□□□□ 0.62
CLSTN1-201ENST00000361311 ME1P48163 572 aa18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 BLOC1S2Q6QNY1 142 aa18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 ZNF396Q96N95 335 aaPredicted RBP18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 PLB1Q6P1J6 1458 aa18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 FAM177BA6PVY3 158 aa18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 DHX8Q14562 1220 aaKnown RBP18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 TMCO3Q6UWJ1 677 aa18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 FAM177A1Q8N128 213 aaPredicted RBP18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 MAGI1Q96QZ7 1491 aaPredicted RBP18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 COL17A1Q9UMD9 1497 aaPredicted RBP18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 STX6O43752 255 aa18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 PDIA4P13667 645 aaKnown RBP18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 TRIM29Q14134 588 aa18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 TAF7LQ5H9L4 462 aa18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 LIMCH1Q9UPQ0 1083 aa18.92■□□□□ 0.62
CLSTN1-201ENST00000361311 HIP1O00291 1037 aa18.91■□□□□ 0.62
CLSTN1-201ENST00000361311 USP48Q86UV5 1035 aa18.91■□□□□ 0.62
CLSTN1-201ENST00000361311 ADGRF5Q8IZF2 1346 aa18.91■□□□□ 0.62
CLSTN1-201ENST00000361311 TULP1O00294 542 aaPredicted RBP18.91■□□□□ 0.62
CLSTN1-201ENST00000361311 LARP6Q9BRS8 491 aaKnown RBP18.91■□□□□ 0.62
CLSTN1-201ENST00000361311 SCAND2PQ9GZW5 306 aaPredicted RBP18.91■□□□□ 0.62
CLSTN1-201ENST00000361311 STK38Q15208 465 aa18.9■□□□□ 0.62
CLSTN1-201ENST00000361311 CFAP45Q9UL16 551 aa18.9■□□□□ 0.62
CLSTN1-201ENST00000361311 IPO7O95373 1038 aaKnown RBP18.9■□□□□ 0.62
CLSTN1-201ENST00000361311 DCTN1Q14203 1278 aa18.9■□□□□ 0.62
CLSTN1-201ENST00000361311 NUTM1Q86Y26 1132 aa18.9■□□□□ 0.62
CLSTN1-201ENST00000361311 TRMT1Q9NXH9 659 aaKnown RBP18.9■□□□□ 0.62
CLSTN1-201ENST00000361311 ZNF330Q9Y3S2 320 aaPredicted RBP18.9■□□□□ 0.62
CLSTN1-201ENST00000361311 ARHGAP45Q92619 1136 aa18.89■□□□□ 0.61
CLSTN1-201ENST00000361311 SERPINC1P01008 464 aa18.89■□□□□ 0.61
CLSTN1-201ENST00000361311 CDK19Q9BWU1 502 aa18.89■□□□□ 0.61
CLSTN1-201ENST00000361311 KRT222Q8N1A0 295 aa18.89■□□□□ 0.61
CLSTN1-201ENST00000361311 PAXBP1Q9Y5B6 917 aa18.88■□□□□ 0.61
CLSTN1-201ENST00000361311 TSPYL1Q9H0U9 437 aa18.88■□□□□ 0.61
CLSTN1-201ENST00000361311 KIF14Q15058 1648 aa18.88■□□□□ 0.61
CLSTN1-201ENST00000361311 MYRIPQ8NFW9 859 aa18.88■□□□□ 0.61
CLSTN1-201ENST00000361311 SRGAP3O43295 1099 aa18.88■□□□□ 0.61
CLSTN1-201ENST00000361311 TIGD1Q96MW7 591 aa18.88■□□□□ 0.61
CLSTN1-201ENST00000361311 ATAD2Q6PL18 1390 aa18.88■□□□□ 0.61
CLSTN1-201ENST00000361311 NUP160Q12769 1436 aa18.87■□□□□ 0.61
CLSTN1-201ENST00000361311 DDX58O95786 925 aaKnown RBP18.87■□□□□ 0.61
CLSTN1-201ENST00000361311 CCDC186Q7Z3E2 898 aa18.87■□□□□ 0.61
CLSTN1-201ENST00000361311 C16orf71Q8IYS4 520 aaPredicted RBP18.87■□□□□ 0.61
CLSTN1-201ENST00000361311 ANKRD20A12PQ8NF67 263 aa18.87■□□□□ 0.61
CLSTN1-201ENST00000361311 ERCC4Q92889 916 aaPredicted RBP18.87■□□□□ 0.61
CLSTN1-201ENST00000361311 ZNF165P49910 485 aa18.87■□□□□ 0.61
CLSTN1-201ENST00000361311 SH2B1Q9NRF2 756 aaPredicted RBP18.87■□□□□ 0.61
CLSTN1-201ENST00000361311 CNPY2Q9Y2B0 182 aa18.87■□□□□ 0.61
CLSTN1-201ENST00000361311 ZNF500O60304 480 aaPredicted RBP18.86■□□□□ 0.61
CLSTN1-201ENST00000361311 KIF20AO95235 890 aa18.86■□□□□ 0.61
CLSTN1-201ENST00000361311 SFPQP23246 707 aaKnown RBP eCLIP18.86■□□□□ 0.61
CLSTN1-201ENST00000361311 LRRFIP1Q32MZ4 808 aaKnown RBP18.86■□□□□ 0.61
CLSTN1-201ENST00000361311 TSHZ3Q63HK5 1081 aa18.86■□□□□ 0.61
CLSTN1-201ENST00000361311 DDX54Q8TDD1 881 aaKnown RBP18.86■□□□□ 0.61
CLSTN1-201ENST00000361311 LMBRD1Q9NUN5 540 aa18.86■□□□□ 0.61
CLSTN1-201ENST00000361311 CEP135Q66GS9 1140 aa18.86■□□□□ 0.61
CLSTN1-201ENST00000361311 TTLL5Q6EMB2 1281 aa18.86■□□□□ 0.61
CLSTN1-201ENST00000361311 POLR3GO15318 223 aaPredicted RBP18.85■□□□□ 0.61
CLSTN1-201ENST00000361311 NEMFO60524 1076 aa18.85■□□□□ 0.61
CLSTN1-201ENST00000361311 ZSCAN22P10073 491 aaPredicted RBP18.85■□□□□ 0.61
CLSTN1-201ENST00000361311 GTF2F1P35269 517 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLSTN1-201ENST00000361311 HDGFL1Q5TGJ6 251 aa18.85■□□□□ 0.61
CLSTN1-201ENST00000361311 PRPF40BQ6NWY9 871 aaKnown RBP18.85■□□□□ 0.61
CLSTN1-201ENST00000361311 CARD14Q9BXL6 1004 aa18.85■□□□□ 0.61
CLSTN1-201ENST00000361311 DDX19AQ9NUU7 478 aaKnown RBP18.85■□□□□ 0.61
CLSTN1-201ENST00000361311 USP26Q9BXU7 913 aa18.85■□□□□ 0.61
CLSTN1-201ENST00000361311 TRDNQ13061 729 aa18.85■□□□□ 0.61
CLSTN1-201ENST00000361311 C1orf141Q5JVX7 400 aa18.84■□□□□ 0.61
CLSTN1-201ENST00000361311 RRS1Q15050 365 aaKnown RBP18.84■□□□□ 0.61
CLSTN1-201ENST00000361311 SKIDA1Q1XH10 827 aa18.84■□□□□ 0.61
CLSTN1-201ENST00000361311 ERC1Q8IUD2 1116 aa18.84■□□□□ 0.61
CLSTN1-201ENST00000361311 TFIP11Q9UBB9 837 aaKnown RBP18.84■□□□□ 0.61
CLSTN1-201ENST00000361311 F6X3S4 739 aa18.84■□□□□ 0.61
CLSTN1-201ENST00000361311 NOL10Q9BSC4 688 aaKnown RBP18.84■□□□□ 0.61
CLSTN1-201ENST00000361311 GJB2P29033 226 aa18.83■□□□□ 0.61
CLSTN1-201ENST00000361311 BMS1Q14692 1282 aaKnown RBP18.83■□□□□ 0.61
CLSTN1-201ENST00000361311 PLEKHM2Q8IWE5 1019 aa18.83■□□□□ 0.61
CLSTN1-201ENST00000361311 FAM200AQ8TCP9 573 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms