RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 LRP6O75581 1613 aa27.21■■□□□ 1.95
MAP1LC3A-201ENST00000360668 FAM83GA6ND36 823 aa27.21■■□□□ 1.95
MAP1LC3A-201ENST00000360668 ZNF853P0CG23 659 aa27.21■■□□□ 1.95
MAP1LC3A-201ENST00000360668 PRDM11Q9NQV5 511 aa27.21■■□□□ 1.95
MAP1LC3A-201ENST00000360668 NUTM2BA6NNL0 878 aaPredicted RBP27.18■■□□□ 1.94
MAP1LC3A-201ENST00000360668 NUTM2EB1AL46 878 aaPredicted RBP27.18■■□□□ 1.94
MAP1LC3A-201ENST00000360668 NUTM2AQ8IVF1 878 aaPredicted RBP27.18■■□□□ 1.94
MAP1LC3A-201ENST00000360668 RTF1Q92541 710 aaKnown RBP27.18■■□□□ 1.94
MAP1LC3A-201ENST00000360668 CFAP44Q96MT7 982 aa27.18■■□□□ 1.94
MAP1LC3A-201ENST00000360668 DCTN1Q14203 1278 aa27.18■■□□□ 1.94
MAP1LC3A-201ENST00000360668 GNAT3A8MTJ3 354 aa27.16■■□□□ 1.94
MAP1LC3A-201ENST00000360668 EXOSC9Q06265 439 aaKnown RBP27.16■■□□□ 1.94
MAP1LC3A-201ENST00000360668 AMOTQ4VCS5 1084 aa27.16■■□□□ 1.94
MAP1LC3A-201ENST00000360668 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.16■■□□□ 1.94
MAP1LC3A-201ENST00000360668 MAP3K5Q99683 1374 aa27.16■■□□□ 1.94
MAP1LC3A-201ENST00000360668 CSB-PGBD3P0DP91 1061 aa27.15■■□□□ 1.94
MAP1LC3A-201ENST00000360668 PLEKHO1Q53GL0 409 aaPredicted RBP27.15■■□□□ 1.94
MAP1LC3A-201ENST00000360668 MEX3CQ5U5Q3 659 aaKnown RBP27.15■■□□□ 1.94
MAP1LC3A-201ENST00000360668 MCM10Q7L590 875 aa27.15■■□□□ 1.94
MAP1LC3A-201ENST00000360668 PELP1Q8IZL8 1130 aaKnown RBP27.15■■□□□ 1.94
MAP1LC3A-201ENST00000360668 NLRP2Q9NX02 1062 aa27.15■■□□□ 1.94
MAP1LC3A-201ENST00000360668 LAS1LQ9Y4W2 734 aaKnown RBP27.15■■□□□ 1.94
MAP1LC3A-201ENST00000360668 PLEKHG2Q9H7P9 1386 aa27.15■■□□□ 1.94
MAP1LC3A-201ENST00000360668 CRB1P82279 1406 aa27.14■■□□□ 1.94
MAP1LC3A-201ENST00000360668 RARSP54136 660 aaKnown RBP27.14■■□□□ 1.93
MAP1LC3A-201ENST00000360668 LRRC37A3O60309 1634 aa27.13■■□□□ 1.93
MAP1LC3A-201ENST00000360668 MBIPQ9NS73 344 aa27.12■■□□□ 1.93
MAP1LC3A-201ENST00000360668 COL5A2P05997 1499 aaPredicted RBP27.12■■□□□ 1.93
MAP1LC3A-201ENST00000360668 POTEAQ6S8J7 498 aa27.11■■□□□ 1.93
MAP1LC3A-201ENST00000360668 WDR17Q8IZU2 1322 aa27.11■■□□□ 1.93
MAP1LC3A-201ENST00000360668 CHL1O00533 1208 aa27.1■■□□□ 1.93
MAP1LC3A-201ENST00000360668 PLIN1O60240 522 aa27.1■■□□□ 1.93
MAP1LC3A-201ENST00000360668 BCAR3O75815 825 aa27.1■■□□□ 1.93
MAP1LC3A-201ENST00000360668 SOCS7O14512 581 aa27.09■■□□□ 1.93
MAP1LC3A-201ENST00000360668 RAPGEF4Q8WZA2 1011 aa27.09■■□□□ 1.93
MAP1LC3A-201ENST00000360668 AKAP4Q5JQC9 854 aa27.08■■□□□ 1.93
MAP1LC3A-201ENST00000360668 ZNF428Q96B54 188 aa27.08■■□□□ 1.93
MAP1LC3A-201ENST00000360668 PPP4R2Q9NY27 417 aa27.08■■□□□ 1.93
MAP1LC3A-201ENST00000360668 COL14A1Q05707 1796 aaKnown RBP27.07■■□□□ 1.92
MAP1LC3A-201ENST00000360668 ZNF530Q6P9A1 599 aaPredicted RBP27.07■■□□□ 1.92
MAP1LC3A-201ENST00000360668 TATP17735 454 aaPredicted RBP27.06■■□□□ 1.92
MAP1LC3A-201ENST00000360668 IL17REQ8NFR9 667 aa27.05■■□□□ 1.92
MAP1LC3A-201ENST00000360668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.05■■□□□ 1.92
MAP1LC3A-201ENST00000360668 CEMIPQ8WUJ3 1361 aa27.05■■□□□ 1.92
MAP1LC3A-201ENST00000360668 ADAMTS2O95450 1211 aa27.04■■□□□ 1.92
MAP1LC3A-201ENST00000360668 MEGF6O75095 1541 aa27.03■■□□□ 1.92
MAP1LC3A-201ENST00000360668 C1orf141Q5JVX7 400 aa27.03■■□□□ 1.92
MAP1LC3A-201ENST00000360668 ZNF772Q68DY9 489 aaPredicted RBP27.03■■□□□ 1.92
MAP1LC3A-201ENST00000360668 BABAM1Q9NWV8 329 aa27.03■■□□□ 1.92
MAP1LC3A-201ENST00000360668 OVOS2A0A0G2JMS6 1433 aa27.02■■□□□ 1.92
MAP1LC3A-201ENST00000360668 TOM1L2Q6ZVM7 507 aa27.02■■□□□ 1.92
MAP1LC3A-201ENST00000360668 C8orf37Q96NL8 207 aa27.02■■□□□ 1.92
MAP1LC3A-201ENST00000360668 CARD10Q9BWT7 1032 aa27.02■■□□□ 1.92
MAP1LC3A-201ENST00000360668 ALDH1L2Q3SY69 923 aa27.01■■□□□ 1.92
MAP1LC3A-201ENST00000360668 VAMP4O75379 141 aa27.01■■□□□ 1.91
MAP1LC3A-201ENST00000360668 EVA1CP58658 441 aa27.01■■□□□ 1.91
MAP1LC3A-201ENST00000360668 SPG7Q9UQ90 795 aa27.01■■□□□ 1.91
MAP1LC3A-201ENST00000360668 PKD1L3Q7Z443 1732 aa27■■□□□ 1.91
MAP1LC3A-201ENST00000360668 AFF2P51816 1311 aa26.99■■□□□ 1.91
MAP1LC3A-201ENST00000360668 PARP4Q9UKK3 1724 aaKnown RBP26.99■■□□□ 1.91
MAP1LC3A-201ENST00000360668 C20orf194Q5TEA3 1177 aa26.99■■□□□ 1.91
MAP1LC3A-201ENST00000360668 SSH1Q8WYL5 1049 aa26.99■■□□□ 1.91
MAP1LC3A-201ENST00000360668 TSPYL4Q9UJ04 414 aa26.99■■□□□ 1.91
MAP1LC3A-201ENST00000360668 PDE3AQ14432 1141 aa26.98■■□□□ 1.91
MAP1LC3A-201ENST00000360668 TAF7Q15545 349 aaPredicted RBP26.98■■□□□ 1.91
MAP1LC3A-201ENST00000360668 TWISTNBQ3B726 338 aaPredicted RBP26.98■■□□□ 1.91
MAP1LC3A-201ENST00000360668 C8orf58Q8NAV2 365 aa26.98■■□□□ 1.91
MAP1LC3A-201ENST00000360668 EXOC6Q8TAG9 804 aa26.98■■□□□ 1.91
MAP1LC3A-201ENST00000360668 SMC4Q9NTJ3 1288 aa26.98■■□□□ 1.91
MAP1LC3A-201ENST00000360668 ADAMTS7Q9UKP4 1686 aa26.98■■□□□ 1.91
MAP1LC3A-201ENST00000360668 CANXP27824 592 aaKnown RBP26.97■■□□□ 1.91
MAP1LC3A-201ENST00000360668 TSPYL6Q8N831 410 aa26.97■■□□□ 1.91
MAP1LC3A-201ENST00000360668 BCL2L13Q9BXK5 485 aa26.97■■□□□ 1.91
MAP1LC3A-201ENST00000360668 STRN4Q9NRL3 753 aa26.97■■□□□ 1.91
MAP1LC3A-201ENST00000360668 BTG4Q9NY30 223 aa26.97■■□□□ 1.91
MAP1LC3A-201ENST00000360668 BRPF1P55201 1214 aaPredicted RBP26.97■■□□□ 1.91
MAP1LC3A-201ENST00000360668 LARP1Q6PKG0 1096 aaKnown RBP26.97■■□□□ 1.91
MAP1LC3A-201ENST00000360668 NGLY1Q96IV0 654 aa26.97■■□□□ 1.91
MAP1LC3A-201ENST00000360668 VIRMAQ69YN4 1812 aaKnown RBP26.96■■□□□ 1.91
MAP1LC3A-201ENST00000360668 RNMTO43148 476 aaKnown RBP26.96■■□□□ 1.91
MAP1LC3A-201ENST00000360668 CRBNQ96SW2 442 aa26.96■■□□□ 1.91
MAP1LC3A-201ENST00000360668 LGR6Q9HBX8 967 aa26.96■■□□□ 1.91
MAP1LC3A-201ENST00000360668 FRAT1Q92837 279 aaPredicted RBP26.94■■□□□ 1.9
MAP1LC3A-201ENST00000360668 MIS18AQ9NYP9 233 aa26.94■■□□□ 1.9
MAP1LC3A-201ENST00000360668 MPRIPQ6WCQ1 1025 aa26.93■■□□□ 1.9
MAP1LC3A-201ENST00000360668 PHKG2P15735 406 aa26.92■■□□□ 1.9
MAP1LC3A-201ENST00000360668 IFNL2Q8IZJ0 200 aa26.92■■□□□ 1.9
MAP1LC3A-201ENST00000360668 KIF16BQ96L93 1317 aa26.92■■□□□ 1.9
MAP1LC3A-201ENST00000360668 ELL2O00472 640 aaPredicted RBP26.92■■□□□ 1.9
MAP1LC3A-201ENST00000360668 ZKSCAN2Q63HK3 967 aa26.92■■□□□ 1.9
MAP1LC3A-201ENST00000360668 PLCH1Q4KWH8 1693 aa26.92■■□□□ 1.9
MAP1LC3A-201ENST00000360668 TEFQ10587 303 aa26.91■■□□□ 1.9
MAP1LC3A-201ENST00000360668 FNBP4Q8N3X1 1017 aaPredicted RBP26.91■■□□□ 1.9
MAP1LC3A-201ENST00000360668 IL2RBP14784 551 aa26.9■■□□□ 1.9
MAP1LC3A-201ENST00000360668 KDM3BQ7LBC6 1761 aa26.89■■□□□ 1.9
MAP1LC3A-201ENST00000360668 SCN11AQ9UI33 1791 aa26.89■■□□□ 1.9
MAP1LC3A-201ENST00000360668 MS4A1P11836 297 aa26.89■■□□□ 1.9
MAP1LC3A-201ENST00000360668 SOS1Q07889 1333 aaPredicted RBP26.89■■□□□ 1.9
MAP1LC3A-201ENST00000360668 HSP90AB1P08238 724 aaKnown RBP26.88■■□□□ 1.89
MAP1LC3A-201ENST00000360668 MRPL50Q8N5N7 158 aaKnown RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms