RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 CPS1P31327 1500 aa25.6■■□□□ 1.69
TRIM3-202ENST00000359518 F6X3S4 739 aa25.6■■□□□ 1.69
TRIM3-202ENST00000359518 RICTORQ6R327 1708 aa25.6■■□□□ 1.69
TRIM3-202ENST00000359518 SLC4A2P04920 1241 aa25.6■■□□□ 1.69
TRIM3-202ENST00000359518 ISY1Q9ULR0 285 aaKnown RBP25.6■■□□□ 1.69
TRIM3-202ENST00000359518 MSH6P52701 1360 aa25.6■■□□□ 1.69
TRIM3-202ENST00000359518 CPSF1Q10570 1443 aaKnown RBP25.6■■□□□ 1.69
TRIM3-202ENST00000359518 TSHZ3Q63HK5 1081 aa25.59■■□□□ 1.69
TRIM3-202ENST00000359518 DLG5Q8TDM6 1919 aa25.59■■□□□ 1.69
TRIM3-202ENST00000359518 HSP90AB2PQ58FF8 381 aa25.59■■□□□ 1.69
TRIM3-202ENST00000359518 KNDC1Q76NI1 1749 aa25.59■■□□□ 1.69
TRIM3-202ENST00000359518 CAVIN1Q6NZI2 390 aaKnown RBP25.58■■□□□ 1.69
TRIM3-202ENST00000359518 CDK12Q9NYV4 1490 aaPredicted RBP25.58■■□□□ 1.69
TRIM3-202ENST00000359518 NASPP49321 788 aaPredicted RBP25.58■■□□□ 1.68
TRIM3-202ENST00000359518 FOXO3O43524 673 aa25.57■■□□□ 1.68
TRIM3-202ENST00000359518 G2E3Q7L622 706 aa25.55■■□□□ 1.68
TRIM3-202ENST00000359518 RPAP2Q8IXW5 612 aaPredicted RBP25.55■■□□□ 1.68
TRIM3-202ENST00000359518 A2ML1A8K2U0 1454 aa25.55■■□□□ 1.68
TRIM3-202ENST00000359518 PRR36Q9H6K5 1346 aa25.55■■□□□ 1.68
TRIM3-202ENST00000359518 FAM69CQ0P6D2 419 aa25.55■■□□□ 1.68
TRIM3-202ENST00000359518 ATP10DQ9P241 1426 aa25.55■■□□□ 1.68
TRIM3-202ENST00000359518 CHL1O00533 1208 aa25.55■■□□□ 1.68
TRIM3-202ENST00000359518 KLHL40Q2TBA0 621 aa25.55■■□□□ 1.68
TRIM3-202ENST00000359518 RTL1A6NKG5 1358 aa25.54■■□□□ 1.68
TRIM3-202ENST00000359518 AATKQ6ZMQ8 1374 aa25.54■■□□□ 1.68
TRIM3-202ENST00000359518 PTMSP20962 102 aa25.54■■□□□ 1.68
TRIM3-202ENST00000359518 CASC1Q6TDU7 716 aa25.53■■□□□ 1.68
TRIM3-202ENST00000359518 PRPF40AO75400 957 aaKnown RBP25.53■■□□□ 1.68
TRIM3-202ENST00000359518 NECTIN2Q92692 538 aa25.53■■□□□ 1.68
TRIM3-202ENST00000359518 NOL8Q76FK4 1167 aaKnown RBP25.52■■□□□ 1.68
TRIM3-202ENST00000359518 EXOC6BQ9Y2D4 811 aa25.52■■□□□ 1.68
TRIM3-202ENST00000359518 RBM27Q9P2N5 1060 aaKnown RBP25.51■■□□□ 1.67
TRIM3-202ENST00000359518 RGS12O14924 1447 aa25.51■■□□□ 1.67
TRIM3-202ENST00000359518 NUCB2P80303 420 aa25.51■■□□□ 1.67
TRIM3-202ENST00000359518 ST18O60284 1047 aa25.5■■□□□ 1.67
TRIM3-202ENST00000359518 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.5■■□□□ 1.67
TRIM3-202ENST00000359518 ANP32BQ92688 251 aaKnown RBP25.49■■□□□ 1.67
TRIM3-202ENST00000359518 LMBRD1Q9NUN5 540 aa25.49■■□□□ 1.67
TRIM3-202ENST00000359518 ZSCAN23Q3MJ62 389 aa25.47■■□□□ 1.67
TRIM3-202ENST00000359518 TSPYL4Q9UJ04 414 aa25.47■■□□□ 1.67
TRIM3-202ENST00000359518 CLEC17AQ6ZS10 378 aa25.47■■□□□ 1.67
TRIM3-202ENST00000359518 TTC21BQ7Z4L5 1316 aa25.47■■□□□ 1.67
TRIM3-202ENST00000359518 NEK4P51957 841 aa25.47■■□□□ 1.67
TRIM3-202ENST00000359518 KIF24Q5T7B8 1368 aa25.46■■□□□ 1.67
TRIM3-202ENST00000359518 ACEP12821 1306 aa25.46■■□□□ 1.67
TRIM3-202ENST00000359518 REC8O95072 547 aa25.46■■□□□ 1.67
TRIM3-202ENST00000359518 DLC1Q96QB1 1528 aa25.46■■□□□ 1.67
TRIM3-202ENST00000359518 ERC2O15083 957 aa25.46■■□□□ 1.67
TRIM3-202ENST00000359518 ZDHHC9Q9Y397 364 aa25.46■■□□□ 1.67
TRIM3-202ENST00000359518 CCDC173Q0VFZ6 552 aa25.45■■□□□ 1.67
TRIM3-202ENST00000359518 CYP2E1P05181 493 aaPredicted RBP25.45■■□□□ 1.66
TRIM3-202ENST00000359518 PDE1AP54750 535 aa25.45■■□□□ 1.66
TRIM3-202ENST00000359518 FOXD4L6Q3SYB3 417 aaPredicted RBP25.45■■□□□ 1.66
TRIM3-202ENST00000359518 FOXD4L3Q6VB84 417 aaPredicted RBP25.45■■□□□ 1.66
TRIM3-202ENST00000359518 HAP1P54257 671 aaPredicted RBP25.45■■□□□ 1.66
TRIM3-202ENST00000359518 PTPRCP08575 1304 aa25.44■■□□□ 1.66
TRIM3-202ENST00000359518 HMMRO75330 724 aa25.44■■□□□ 1.66
TRIM3-202ENST00000359518 ESF1Q9H501 851 aaKnown RBP25.44■■□□□ 1.66
TRIM3-202ENST00000359518 PRIM1P49642 420 aaKnown RBP25.43■■□□□ 1.66
TRIM3-202ENST00000359518 MTHFSDQ2M296 383 aaKnown RBP25.43■■□□□ 1.66
TRIM3-202ENST00000359518 RTF1Q92541 710 aaKnown RBP25.43■■□□□ 1.66
TRIM3-202ENST00000359518 RBSNQ9H1K0 784 aa25.43■■□□□ 1.66
TRIM3-202ENST00000359518 GPT2Q8TD30 523 aa25.42■■□□□ 1.66
TRIM3-202ENST00000359518 RILPL2Q969X0 211 aa25.42■■□□□ 1.66
TRIM3-202ENST00000359518 NSFL1CQ9UNZ2 370 aaKnown RBP25.42■■□□□ 1.66
TRIM3-202ENST00000359518 MAP3K19Q56UN5 1328 aa25.41■■□□□ 1.66
TRIM3-202ENST00000359518 TRIM6-TRIM34B2RNG4 842 aa25.41■■□□□ 1.66
TRIM3-202ENST00000359518 PPP1R9BQ96SB3 815 aa25.4■■□□□ 1.66
TRIM3-202ENST00000359518 CWC22Q9HCG8 908 aaKnown RBP25.4■■□□□ 1.66
TRIM3-202ENST00000359518 PALD1Q9ULE6 856 aa25.39■■□□□ 1.66
TRIM3-202ENST00000359518 ROBO2Q9HCK4 1378 aa25.38■■□□□ 1.65
TRIM3-202ENST00000359518 FKBP5Q13451 457 aaPredicted RBP25.38■■□□□ 1.65
TRIM3-202ENST00000359518 HSP90AA2PQ14568 343 aaPredicted RBP25.38■■□□□ 1.65
TRIM3-202ENST00000359518 TPRNQ4KMQ1 711 aa25.38■■□□□ 1.65
TRIM3-202ENST00000359518 TMX3Q96JJ7 454 aa25.38■■□□□ 1.65
TRIM3-202ENST00000359518 ANO2Q9NQ90 1003 aa25.38■■□□□ 1.65
TRIM3-202ENST00000359518 KIAA0232Q92628 1395 aa25.38■■□□□ 1.65
TRIM3-202ENST00000359518 PNMA6EA0A0J9YXQ4 647 aa25.38■■□□□ 1.65
TRIM3-202ENST00000359518 ZNF445P59923 1031 aa25.38■■□□□ 1.65
TRIM3-202ENST00000359518 SYCE3A1L190 88 aa25.37■■□□□ 1.65
TRIM3-202ENST00000359518 GNAI2P04899 355 aa25.37■■□□□ 1.65
TRIM3-202ENST00000359518 ZSCAN30Q86W11 494 aa25.37■■□□□ 1.65
TRIM3-202ENST00000359518 REREQ9P2R6 1566 aa25.36■■□□□ 1.65
TRIM3-202ENST00000359518 MSNP26038 577 aaKnown RBP25.36■■□□□ 1.65
TRIM3-202ENST00000359518 PLPPR3Q6T4P5 718 aa25.36■■□□□ 1.65
TRIM3-202ENST00000359518 UPF3BQ9BZI7 483 aaKnown RBP25.36■■□□□ 1.65
TRIM3-202ENST00000359518 TSPOAP1O95153 1857 aa25.36■■□□□ 1.65
TRIM3-202ENST00000359518 STK31Q9BXU1 1019 aa25.36■■□□□ 1.65
TRIM3-202ENST00000359518 TMEM63CQ9P1W3 806 aa25.36■■□□□ 1.65
TRIM3-202ENST00000359518 SETD1AO15047 1707 aaKnown RBP25.36■■□□□ 1.65
TRIM3-202ENST00000359518 RNF214Q8ND24 703 aa25.35■■□□□ 1.65
TRIM3-202ENST00000359518 CRB1P82279 1406 aa25.35■■□□□ 1.65
TRIM3-202ENST00000359518 SLC26A8Q96RN1 970 aa25.35■■□□□ 1.65
TRIM3-202ENST00000359518 CCT4P50991 539 aaKnown RBP25.34■■□□□ 1.65
TRIM3-202ENST00000359518 KIAA1211Q6ZU35 1233 aa25.34■■□□□ 1.65
TRIM3-202ENST00000359518 NUTM2GQ5VZR2 741 aa25.34■■□□□ 1.65
TRIM3-202ENST00000359518 LRRCC1Q9C099 1032 aa25.34■■□□□ 1.65
TRIM3-202ENST00000359518 IL1RAPL2Q9NP60 686 aa25.34■■□□□ 1.65
TRIM3-202ENST00000359518 ESYT1Q9BSJ8 1104 aa25.33■■□□□ 1.65
TRIM3-202ENST00000359518 IBTKQ9P2D0 1353 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms