RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 ABCC11Q96J66 1382 aa13.71□□□□□ -0.21
CNOT3-202ENST00000358389 MCM2P49736 904 aa13.71□□□□□ -0.21
CNOT3-202ENST00000358389 API5Q9BZZ5 524 aaKnown RBP13.71□□□□□ -0.21
CNOT3-202ENST00000358389 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.21
CNOT3-202ENST00000358389 MINK1Q8N4C8 1332 aaPredicted RBP13.71□□□□□ -0.21
CNOT3-202ENST00000358389 MX1P20591 662 aa13.71□□□□□ -0.21
CNOT3-202ENST00000358389 IRX5P78411 483 aaPredicted RBP13.71□□□□□ -0.21
CNOT3-202ENST00000358389 CAMK4Q16566 473 aa13.71□□□□□ -0.21
CNOT3-202ENST00000358389 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.21
CNOT3-202ENST00000358389 PRKAR2BP31323 418 aa13.71□□□□□ -0.22
CNOT3-202ENST00000358389 GABPB1Q06547 395 aaPredicted RBP13.71□□□□□ -0.22
CNOT3-202ENST00000358389 KRT222Q8N1A0 295 aa13.71□□□□□ -0.22
CNOT3-202ENST00000358389 FAM69CQ0P6D2 419 aa13.7□□□□□ -0.22
CNOT3-202ENST00000358389 TRIM34Q9BYJ4 488 aa13.7□□□□□ -0.22
CNOT3-202ENST00000358389 NCBP1Q09161 790 aaKnown RBP13.7□□□□□ -0.22
CNOT3-202ENST00000358389 LTV1Q96GA3 475 aaPredicted RBP13.7□□□□□ -0.22
CNOT3-202ENST00000358389 SYNMO15061 1565 aa13.7□□□□□ -0.22
CNOT3-202ENST00000358389 PLXNC1O60486 1568 aa13.7□□□□□ -0.22
CNOT3-202ENST00000358389 VPS37CA5D8V6 355 aaPredicted RBP13.7□□□□□ -0.22
CNOT3-202ENST00000358389 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
CNOT3-202ENST00000358389 SPTLC3Q9NUV7 552 aa13.7□□□□□ -0.22
CNOT3-202ENST00000358389 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
CNOT3-202ENST00000358389 LRMPQ12912 555 aa13.69□□□□□ -0.22
CNOT3-202ENST00000358389 SHANK2Q9UPX8 1470 aa13.69□□□□□ -0.22
CNOT3-202ENST00000358389 CCDC192P0DO97 292 aa13.69□□□□□ -0.22
CNOT3-202ENST00000358389 CALCOCO1Q9P1Z2 691 aa13.69□□□□□ -0.22
CNOT3-202ENST00000358389 DISP1Q96F81 1524 aa13.68□□□□□ -0.22
CNOT3-202ENST00000358389 DNAJC2Q99543 621 aaKnown RBP13.68□□□□□ -0.22
CNOT3-202ENST00000358389 SMC3Q9UQE7 1217 aa13.68□□□□□ -0.22
CNOT3-202ENST00000358389 ANKRD7Q92527 254 aa13.68□□□□□ -0.22
CNOT3-202ENST00000358389 MRPL50Q8N5N7 158 aaKnown RBP13.67□□□□□ -0.22
CNOT3-202ENST00000358389 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
CNOT3-202ENST00000358389 EID1Q9Y6B2 187 aa13.67□□□□□ -0.22
CNOT3-202ENST00000358389 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
CNOT3-202ENST00000358389 CKAP2LQ8IYA6 745 aa13.67□□□□□ -0.22
CNOT3-202ENST00000358389 DCTPP1Q9H773 170 aa13.67□□□□□ -0.22
CNOT3-202ENST00000358389 CTNNA3Q9UI47 895 aa13.67□□□□□ -0.22
CNOT3-202ENST00000358389 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
CNOT3-202ENST00000358389 AFAP1Q8N556 730 aa13.66□□□□□ -0.22
CNOT3-202ENST00000358389 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.223e-6■■□□□ 14.2
CNOT3-202ENST00000358389 KCNF1Q9H3M0 494 aa13.66□□□□□ -0.22
CNOT3-202ENST00000358389 ADCY10Q96PN6 1610 aa13.66□□□□□ -0.22
CNOT3-202ENST00000358389 SMTNL1A8MU46 457 aa13.66□□□□□ -0.22
CNOT3-202ENST00000358389 UBE2HP62256 183 aa13.66□□□□□ -0.22
CNOT3-202ENST00000358389 TRMT1Q9NXH9 659 aaKnown RBP13.66□□□□□ -0.22
CNOT3-202ENST00000358389 PALD1Q9ULE6 856 aa13.66□□□□□ -0.22
CNOT3-202ENST00000358389 VAMP4O75379 141 aa13.66□□□□□ -0.22
CNOT3-202ENST00000358389 HMMRO75330 724 aa13.65□□□□□ -0.22
CNOT3-202ENST00000358389 LUZP1Q86V48 1076 aa13.65□□□□□ -0.22
CNOT3-202ENST00000358389 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
CNOT3-202ENST00000358389 TERF2Q15554 542 aa13.65□□□□□ -0.22
CNOT3-202ENST00000358389 KIAA0556O60303 1618 aa13.65□□□□□ -0.22
CNOT3-202ENST00000358389 FBLN1P23142 703 aa13.65□□□□□ -0.22
CNOT3-202ENST00000358389 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
CNOT3-202ENST00000358389 GNAI1P63096 354 aa13.64□□□□□ -0.23
CNOT3-202ENST00000358389 DDX41Q9UJV9 622 aaKnown RBP13.64□□□□□ -0.23
CNOT3-202ENST00000358389 EXOC6BQ9Y2D4 811 aa13.64□□□□□ -0.23
CNOT3-202ENST00000358389 TAF7LQ5H9L4 462 aa13.64□□□□□ -0.23
CNOT3-202ENST00000358389 CEP135Q66GS9 1140 aa13.64□□□□□ -0.23
CNOT3-202ENST00000358389 ZNF330Q9Y3S2 320 aaPredicted RBP13.64□□□□□ -0.23
CNOT3-202ENST00000358389 ZBTB9Q96C00 473 aa13.64□□□□□ -0.23
CNOT3-202ENST00000358389 ZFP91Q96JP5 570 aaPredicted RBP13.64□□□□□ -0.23
CNOT3-202ENST00000358389 STK31Q9BXU1 1019 aa13.64□□□□□ -0.23
CNOT3-202ENST00000358389 IL16Q14005 1332 aa13.64□□□□□ -0.23
CNOT3-202ENST00000358389 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
CNOT3-202ENST00000358389 POLR3GO15318 223 aaPredicted RBP13.63□□□□□ -0.23
CNOT3-202ENST00000358389 FERMT3Q86UX7 667 aa13.63□□□□□ -0.23
CNOT3-202ENST00000358389 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
CNOT3-202ENST00000358389 NOL10Q9BSC4 688 aaKnown RBP13.63□□□□□ -0.23
CNOT3-202ENST00000358389 ST7Q9NRC1 585 aa13.63□□□□□ -0.23
CNOT3-202ENST00000358389 ANKRD36BQ8N2N9 1353 aa13.63□□□□□ -0.23
CNOT3-202ENST00000358389 ERVK-7P63135 1459 aa13.63□□□□□ -0.23
CNOT3-202ENST00000358389 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
CNOT3-202ENST00000358389 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
CNOT3-202ENST00000358389 DNM1Q05193 864 aaKnown RBP13.62□□□□□ -0.23
CNOT3-202ENST00000358389 GORABQ5T7V8 394 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 KIF18AQ8NI77 898 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 STX6O43752 255 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 MAP4K4O95819 1239 aaPredicted RBP13.62□□□□□ -0.23
CNOT3-202ENST00000358389 FILIP1Q7Z7B0 1213 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 NECTIN2Q92692 538 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 HTATSF1O43719 755 aaKnown RBP13.62□□□□□ -0.23
CNOT3-202ENST00000358389 ZSCAN22P10073 491 aaPredicted RBP13.62□□□□□ -0.23
CNOT3-202ENST00000358389 ZNF397Q8NF99 534 aaPredicted RBP13.62□□□□□ -0.23
CNOT3-202ENST00000358389 PAXBP1Q9Y5B6 917 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 GOLGA6L19H0YKK7 550 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 CTIFO43310 598 aaKnown RBP13.62□□□□□ -0.23
CNOT3-202ENST00000358389 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 PTPN14Q15678 1187 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 ELF2Q15723 593 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 FBXW7Q969H0 707 aa13.62□□□□□ -0.23
CNOT3-202ENST00000358389 MAP3K11Q16584 847 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 C8orf58Q8NAV2 365 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 ZNF428Q96B54 188 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 PLEKHF1Q96S99 279 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 NUP62CLQ9H1M0 184 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 CLIP2Q9UDT6 1046 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 ZNF215Q9UL58 517 aaPredicted RBP13.61□□□□□ -0.23
CNOT3-202ENST00000358389 NOS1P29475 1434 aa13.61□□□□□ -0.23
CNOT3-202ENST00000358389 AP5Z1O43299 807 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms