RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 CEP135Q66GS9 1140 aa22.46■■□□□ 1.19
BRPF3-202ENST00000357641 CCDC83Q8IWF9 413 aa22.46■■□□□ 1.19
BRPF3-202ENST00000357641 RBM27Q9P2N5 1060 aaKnown RBP22.45■■□□□ 1.18
BRPF3-202ENST00000357641 NF2P35240 595 aa22.45■■□□□ 1.18
BRPF3-202ENST00000357641 CKAP2LQ8IYA6 745 aa22.45■■□□□ 1.18
BRPF3-202ENST00000357641 IFFO1Q0D2I5 559 aa22.45■■□□□ 1.18
BRPF3-202ENST00000357641 PRKAR2BP31323 418 aa22.44■■□□□ 1.18
BRPF3-202ENST00000357641 CCDC69A6NI79 296 aa22.44■■□□□ 1.18
BRPF3-202ENST00000357641 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
BRPF3-202ENST00000357641 SNW1Q13573 536 aaKnown RBP22.43■■□□□ 1.18
BRPF3-202ENST00000357641 SPA17Q15506 151 aa22.43■■□□□ 1.18
BRPF3-202ENST00000357641 IKQ13123 557 aaPredicted RBP22.43■■□□□ 1.18
BRPF3-202ENST00000357641 TTC39AQ5SRH9 613 aa22.43■■□□□ 1.18
BRPF3-202ENST00000357641 CABP2Q9NPB3 220 aa22.43■■□□□ 1.18
BRPF3-202ENST00000357641 ZNF830Q96NB3 372 aaPredicted RBP22.43■■□□□ 1.18
BRPF3-202ENST00000357641 POTEB2H3BUK9 544 aa22.42■■□□□ 1.18
BRPF3-202ENST00000357641 CCDC91Q7Z6B0 441 aa22.42■■□□□ 1.18
BRPF3-202ENST00000357641 ZNF397Q8NF99 534 aaPredicted RBP22.42■■□□□ 1.18
BRPF3-202ENST00000357641 GOPCQ9HD26 462 aa22.42■■□□□ 1.18
BRPF3-202ENST00000357641 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
BRPF3-202ENST00000357641 IMMTQ16891 758 aaKnown RBP22.42■■□□□ 1.18
BRPF3-202ENST00000357641 NUP133Q8WUM0 1156 aa22.42■■□□□ 1.18
BRPF3-202ENST00000357641 NEMFO60524 1076 aa22.42■■□□□ 1.18
BRPF3-202ENST00000357641 PLCD3Q8N3E9 789 aa22.42■■□□□ 1.18
BRPF3-202ENST00000357641 SIL1Q9H173 461 aa22.42■■□□□ 1.18
BRPF3-202ENST00000357641 NOL7Q9UMY1 257 aaKnown RBP22.41■■□□□ 1.18
BRPF3-202ENST00000357641 LUZP1Q86V48 1076 aa22.41■■□□□ 1.18
BRPF3-202ENST00000357641 GTPBP4Q9BZE4 634 aaKnown RBP22.41■■□□□ 1.18
BRPF3-202ENST00000357641 PAXBP1Q9Y5B6 917 aa22.41■■□□□ 1.18
BRPF3-202ENST00000357641 SRCIN1Q9C0H9 1055 aa22.41■■□□□ 1.18
BRPF3-202ENST00000357641 RSPH14Q9UHP6 348 aa22.41■■□□□ 1.18
BRPF3-202ENST00000357641 DNA2P51530 1060 aa22.4■■□□□ 1.18
BRPF3-202ENST00000357641 CCDC175P0C221 793 aa22.4■■□□□ 1.18
BRPF3-202ENST00000357641 XRCC6P12956 609 aaKnown RBP eCLIP22.4■■□□□ 1.18
BRPF3-202ENST00000357641 EVA1CP58658 441 aa22.4■■□□□ 1.18
BRPF3-202ENST00000357641 SRRTQ9BXP5 876 aaKnown RBP22.4■■□□□ 1.18
BRPF3-202ENST00000357641 CCT4P50991 539 aaKnown RBP22.39■■□□□ 1.18
BRPF3-202ENST00000357641 SMC1AQ14683 1233 aaKnown RBP22.39■■□□□ 1.18
BRPF3-202ENST00000357641 TMC6Q7Z403 805 aa22.39■■□□□ 1.18
BRPF3-202ENST00000357641 GDPD2Q9HCC8 539 aa22.39■■□□□ 1.18
BRPF3-202ENST00000357641 ZSCAN23Q3MJ62 389 aa22.39■■□□□ 1.18
BRPF3-202ENST00000357641 CCDC178Q5BJE1 867 aa22.39■■□□□ 1.18
BRPF3-202ENST00000357641 PANK2Q9BZ23 570 aa22.39■■□□□ 1.17
BRPF3-202ENST00000357641 TMEM132AQ24JP5 1023 aa22.39■■□□□ 1.17
BRPF3-202ENST00000357641 CPLX3Q8WVH0 158 aa22.39■■□□□ 1.17
BRPF3-202ENST00000357641 CCDC94Q9BW85 323 aaPredicted RBP22.38■■□□□ 1.17
BRPF3-202ENST00000357641 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
BRPF3-202ENST00000357641 SYTL4Q96C24 671 aaPredicted RBP22.38■■□□□ 1.17
BRPF3-202ENST00000357641 ATP2C2O75185 946 aa22.38■■□□□ 1.17
BRPF3-202ENST00000357641 C20orf194Q5TEA3 1177 aa22.38■■□□□ 1.17
BRPF3-202ENST00000357641 KLHL10Q6JEL2 608 aa22.38■■□□□ 1.17
BRPF3-202ENST00000357641 ZSWIM4Q9H7M6 989 aa22.38■■□□□ 1.17
BRPF3-202ENST00000357641 C11orf95C9JLR9 678 aaPredicted RBP22.37■■□□□ 1.17
BRPF3-202ENST00000357641 CDKL5O76039 1030 aa22.37■■□□□ 1.17
BRPF3-202ENST00000357641 UBE4AQ14139 1066 aa22.37■■□□□ 1.17
BRPF3-202ENST00000357641 WDR63Q8IWG1 891 aa22.37■■□□□ 1.17
BRPF3-202ENST00000357641 ZNF428Q96B54 188 aa22.37■■□□□ 1.17
BRPF3-202ENST00000357641 IGSF3O75054 1194 aa22.37■■□□□ 1.17
BRPF3-202ENST00000357641 LIG1P18858 919 aa22.37■■□□□ 1.17
BRPF3-202ENST00000357641 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
BRPF3-202ENST00000357641 GSDMDP57764 484 aa22.37■■□□□ 1.17
BRPF3-202ENST00000357641 CCDC158Q5M9N0 1113 aa22.37■■□□□ 1.17
BRPF3-202ENST00000357641 CEP63Q96MT8 703 aa22.36■■□□□ 1.17
BRPF3-202ENST00000357641 IL1RAPL2Q9NP60 686 aa22.36■■□□□ 1.17
BRPF3-202ENST00000357641 NOLC1Q14978 699 aaKnown RBP eCLIP22.36■■□□□ 1.17
BRPF3-202ENST00000357641 SCAND2PQ9GZW5 306 aaPredicted RBP22.36■■□□□ 1.17
BRPF3-202ENST00000357641 SLC3A2P08195 630 aaKnown RBP22.36■■□□□ 1.17
BRPF3-202ENST00000357641 AACSQ86V21 672 aa22.36■■□□□ 1.17
BRPF3-202ENST00000357641 PDIA4P13667 645 aaKnown RBP22.36■■□□□ 1.17
BRPF3-202ENST00000357641 BAG4O95429 457 aaKnown RBP22.35■■□□□ 1.17
BRPF3-202ENST00000357641 SSBP05455 408 aaKnown RBP eCLIP22.35■■□□□ 1.17
BRPF3-202ENST00000357641 IVLP07476 585 aa22.35■■□□□ 1.17
BRPF3-202ENST00000357641 TMEM57Q8N5G2 664 aa22.35■■□□□ 1.17
BRPF3-202ENST00000357641 GCOM1H8Y6P7 765 aaPredicted RBP22.34■■□□□ 1.17
BRPF3-202ENST00000357641 MYZAPP0CAP1 466 aa22.34■■□□□ 1.17
BRPF3-202ENST00000357641 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.34■■□□□ 1.17
BRPF3-202ENST00000357641 PAFAH1B1P43034 410 aa22.34■■□□□ 1.17
BRPF3-202ENST00000357641 ZNF526Q8TF50 670 aaPredicted RBP22.34■■□□□ 1.17
BRPF3-202ENST00000357641 NUP88Q99567 741 aaPredicted RBP22.34■■□□□ 1.17
BRPF3-202ENST00000357641 SSR1P43307 286 aaKnown RBP22.34■■□□□ 1.17
BRPF3-202ENST00000357641 CCDC57Q2TAC2 916 aa22.33■■□□□ 1.17
BRPF3-202ENST00000357641 UVSSAQ2YD98 709 aa22.33■■□□□ 1.17
BRPF3-202ENST00000357641 MAATS1Q7Z4T9 603 aa22.33■■□□□ 1.17
BRPF3-202ENST00000357641 MICALL1Q8N3F8 863 aa22.33■■□□□ 1.17
BRPF3-202ENST00000357641 SPECC1Q5M775 1068 aa22.33■■□□□ 1.17
BRPF3-202ENST00000357641 KRT32Q14532 448 aa22.33■■□□□ 1.17
BRPF3-202ENST00000357641 KLHL40Q2TBA0 621 aa22.33■■□□□ 1.16
BRPF3-202ENST00000357641 NUTM1Q86Y26 1132 aa22.32■■□□□ 1.16
BRPF3-202ENST00000357641 GIGYF2Q6Y7W6 1299 aaKnown RBP22.32■■□□□ 1.16
BRPF3-202ENST00000357641 PAF1Q8N7H5 531 aa22.32■■□□□ 1.16
BRPF3-202ENST00000357641 HLTFQ14527 1009 aaKnown RBP eCLIP22.32■■□□□ 1.16
BRPF3-202ENST00000357641 TTC31Q49AM3 519 aaPredicted RBP22.31■■□□□ 1.16
BRPF3-202ENST00000357641 PRPF40BQ6NWY9 871 aaKnown RBP22.31■■□□□ 1.16
BRPF3-202ENST00000357641 SLFN5Q08AF3 891 aa22.31■■□□□ 1.16
BRPF3-202ENST00000357641 LRSAM1Q6UWE0 723 aa22.31■■□□□ 1.16
BRPF3-202ENST00000357641 CCDC12Q8WUD4 166 aaPredicted RBP22.31■■□□□ 1.16
BRPF3-202ENST00000357641 SMARCA5O60264 1052 aaPredicted RBP22.3■■□□□ 1.16
BRPF3-202ENST00000357641 CTAGE5O15320 804 aa22.3■■□□□ 1.16
BRPF3-202ENST00000357641 HSPA4P34932 840 aa22.3■■□□□ 1.16
BRPF3-202ENST00000357641 SPECC1LQ69YQ0 1117 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms