RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 DDX54Q8TDD1 881 aaKnown RBP23.19■■□□□ 1.3
PDLIM7-201ENST00000355572 PANK3Q9H999 370 aa23.19■■□□□ 1.3
PDLIM7-201ENST00000355572 PKD1L3Q7Z443 1732 aa23.19■■□□□ 1.3
PDLIM7-201ENST00000355572 PDGFDQ9GZP0 370 aaPredicted RBP23.17■■□□□ 1.3
PDLIM7-201ENST00000355572 CGNL1Q0VF96 1302 aa23.16■■□□□ 1.3
PDLIM7-201ENST00000355572 TXNRD1Q16881 649 aa23.16■■□□□ 1.3
PDLIM7-201ENST00000355572 LY75O60449 1722 aa23.16■■□□□ 1.3
PDLIM7-201ENST00000355572 NCAPD2Q15021 1401 aa23.16■■□□□ 1.3
PDLIM7-201ENST00000355572 NSD2O96028 1365 aa23.15■■□□□ 1.3
PDLIM7-201ENST00000355572 KIF24Q5T7B8 1368 aa23.15■■□□□ 1.3
PDLIM7-201ENST00000355572 TUBGCP6Q96RT7 1819 aa23.15■■□□□ 1.3
PDLIM7-201ENST00000355572 POLKQ9UBT6 870 aa23.15■■□□□ 1.3
PDLIM7-201ENST00000355572 ITGB4P16144 1822 aa23.15■■□□□ 1.3
PDLIM7-201ENST00000355572 TNNT2P45379 298 aaPredicted RBP23.13■■□□□ 1.29
PDLIM7-201ENST00000355572 SMG6Q86US8 1419 aaKnown RBP23.13■■□□□ 1.29
PDLIM7-201ENST00000355572 KIF7Q2M1P5 1343 aa23.12■■□□□ 1.29
PDLIM7-201ENST00000355572 PPM1GO15355 546 aaPredicted RBP23.12■■□□□ 1.29
PDLIM7-201ENST00000355572 NBPF14Q5TI25 921 aa23.12■■□□□ 1.29
PDLIM7-201ENST00000355572 ZCRB1Q8TBF4 217 aaKnown RBP23.12■■□□□ 1.29
PDLIM7-201ENST00000355572 WASHC2AQ641Q2 1341 aa23.1■■□□□ 1.29
PDLIM7-201ENST00000355572 LRRC4BQ9NT99 713 aa23.1■■□□□ 1.29
PDLIM7-201ENST00000355572 PRIM1P49642 420 aaKnown RBP23.08■■□□□ 1.29
PDLIM7-201ENST00000355572 EYA1Q99502 592 aa23.08■■□□□ 1.29
PDLIM7-201ENST00000355572 KCNQ4P56696 695 aa23.07■■□□□ 1.28
PDLIM7-201ENST00000355572 CYP27B1O15528 508 aa23.06■■□□□ 1.28
PDLIM7-201ENST00000355572 TATP17735 454 aaPredicted RBP23.05■■□□□ 1.28
PDLIM7-201ENST00000355572 EIF4A2Q14240 407 aaKnown RBP23.05■■□□□ 1.28
PDLIM7-201ENST00000355572 ZNF827Q17R98 1081 aa23.05■■□□□ 1.28
PDLIM7-201ENST00000355572 RAPGEF4Q8WZA2 1011 aa23.05■■□□□ 1.28
PDLIM7-201ENST00000355572 QSER1Q2KHR3 1735 aa23.05■■□□□ 1.28
PDLIM7-201ENST00000355572 SYTL4Q96C24 671 aaPredicted RBP23.04■■□□□ 1.28
PDLIM7-201ENST00000355572 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
PDLIM7-201ENST00000355572 SLC15A2Q16348 729 aa23.03■■□□□ 1.28
PDLIM7-201ENST00000355572 AMER1Q5JTC6 1135 aaPredicted RBP23.02■■□□□ 1.28
PDLIM7-201ENST00000355572 C5P01031 1676 aa23■■□□□ 1.27
PDLIM7-201ENST00000355572 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
PDLIM7-201ENST00000355572 ZBTB7AO95365 584 aa22.99■■□□□ 1.27
PDLIM7-201ENST00000355572 STK32BQ9NY57 414 aa22.99■■□□□ 1.27
PDLIM7-201ENST00000355572 PCDH11XQ9BZA7 1347 aa22.99■■□□□ 1.27
PDLIM7-201ENST00000355572 PCDH11YQ9BZA8 1340 aa22.99■■□□□ 1.27
PDLIM7-201ENST00000355572 COL24A1Q17RW2 1714 aa22.97■■□□□ 1.27
PDLIM7-201ENST00000355572 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
PDLIM7-201ENST00000355572 AKT1S1Q96B36 256 aa22.97■■□□□ 1.27
PDLIM7-201ENST00000355572 IGSF1Q8N6C5 1336 aa22.97■■□□□ 1.27
PDLIM7-201ENST00000355572 PTGER2P43116 358 aa22.96■■□□□ 1.27
PDLIM7-201ENST00000355572 SPON1Q9HCB6 807 aa22.96■■□□□ 1.27
PDLIM7-201ENST00000355572 ATF5Q9Y2D1 282 aaPredicted RBP22.95■■□□□ 1.26
PDLIM7-201ENST00000355572 KNSTRNQ9Y448 316 aa22.95■■□□□ 1.26
PDLIM7-201ENST00000355572 AEBP1Q8IUX7 1158 aa22.93■■□□□ 1.26
PDLIM7-201ENST00000355572 VIRMAQ69YN4 1812 aaKnown RBP22.93■■□□□ 1.26
PDLIM7-201ENST00000355572 SGIP1Q9BQI5 828 aa22.92■■□□□ 1.26
PDLIM7-201ENST00000355572 PNPLA7Q6ZV29 1317 aa22.91■■□□□ 1.26
PDLIM7-201ENST00000355572 NKX1-1Q15270 411 aaPredicted RBP22.91■■□□□ 1.26
PDLIM7-201ENST00000355572 SLC27A3Q5K4L6 730 aa22.91■■□□□ 1.26
PDLIM7-201ENST00000355572 PHKG2P15735 406 aa22.9■■□□□ 1.26
PDLIM7-201ENST00000355572 MPRIPQ6WCQ1 1025 aa22.9■■□□□ 1.26
PDLIM7-201ENST00000355572 CC2D1BQ5T0F9 858 aaKnown RBP22.89■■□□□ 1.25
PDLIM7-201ENST00000355572 PIGBQ92521 554 aa22.89■■□□□ 1.25
PDLIM7-201ENST00000355572 PALLDQ8WX93 1383 aa22.89■■□□□ 1.25
PDLIM7-201ENST00000355572 UBR3Q6ZT12 1888 aa22.88■■□□□ 1.25
PDLIM7-201ENST00000355572 CCNL1Q9UK58 526 aaPredicted RBP22.88■■□□□ 1.25
PDLIM7-201ENST00000355572 SPG7Q9UQ90 795 aa22.88■■□□□ 1.25
PDLIM7-201ENST00000355572 C4BP0C0L5 1744 aa22.88■■□□□ 1.25
PDLIM7-201ENST00000355572 IL13P35225 146 aa22.87■■□□□ 1.25
PDLIM7-201ENST00000355572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.87■■□□□ 1.25
PDLIM7-201ENST00000355572 KDM6AO15550 1401 aaPredicted RBP22.86■■□□□ 1.25
PDLIM7-201ENST00000355572 COL3A1P02461 1466 aaPredicted RBP22.85■■□□□ 1.25
PDLIM7-201ENST00000355572 CNGB1Q14028 1251 aaPredicted RBP22.85■■□□□ 1.25
PDLIM7-201ENST00000355572 AMIGO3Q86WK7 504 aa22.85■■□□□ 1.25
PDLIM7-201ENST00000355572 MTFR1LQ9H019 292 aa22.85■■□□□ 1.25
PDLIM7-201ENST00000355572 SCN11AQ9UI33 1791 aa22.85■■□□□ 1.25
PDLIM7-201ENST00000355572 MTHFSP49914 203 aa22.84■■□□□ 1.25
PDLIM7-201ENST00000355572 PPP1R1BQ9UD71 204 aaPredicted RBP22.84■■□□□ 1.25
PDLIM7-201ENST00000355572 SMIM5Q71RC9 77 aa22.83■■□□□ 1.25
PDLIM7-201ENST00000355572 IFNL2Q8IZJ0 200 aa22.83■■□□□ 1.25
PDLIM7-201ENST00000355572 KDRP35968 1356 aa22.83■■□□□ 1.25
PDLIM7-201ENST00000355572 SULT6B1Q6IMI4 303 aa22.81■■□□□ 1.24
PDLIM7-201ENST00000355572 ASAP1Q9ULH1 1129 aa22.81■■□□□ 1.24
PDLIM7-201ENST00000355572 COL5A3P25940 1745 aaPredicted RBP22.8■■□□□ 1.24
PDLIM7-201ENST00000355572 PLEKHG2Q9H7P9 1386 aa22.8■■□□□ 1.24
PDLIM7-201ENST00000355572 COL23A1Q86Y22 540 aaPredicted RBP22.8■■□□□ 1.24
PDLIM7-201ENST00000355572 NPC1L1Q9UHC9 1359 aa22.79■■□□□ 1.24
PDLIM7-201ENST00000355572 TFCP2L1Q9NZI6 479 aa22.79■■□□□ 1.24
PDLIM7-201ENST00000355572 ZNF530Q6P9A1 599 aaPredicted RBP22.78■■□□□ 1.24
PDLIM7-201ENST00000355572 FHDC1Q9C0D6 1143 aaPredicted RBP22.78■■□□□ 1.24
PDLIM7-201ENST00000355572 ITPK1Q13572 414 aa22.77■■□□□ 1.24
PDLIM7-201ENST00000355572 SLC4A9Q96Q91 983 aa22.77■■□□□ 1.24
PDLIM7-201ENST00000355572 ATG3Q9NT62 314 aa22.77■■□□□ 1.24
PDLIM7-201ENST00000355572 TMOD3Q9NYL9 352 aa22.77■■□□□ 1.24
PDLIM7-201ENST00000355572 HMOX1P09601 288 aa22.76■■□□□ 1.23
PDLIM7-201ENST00000355572 LINC00116Q8NCU8 138 aa22.76■■□□□ 1.23
PDLIM7-201ENST00000355572 MYH14Q7Z406 1995 aaKnown RBP22.76■■□□□ 1.23
PDLIM7-201ENST00000355572 ZNF831Q5JPB2 1677 aa22.75■■□□□ 1.23
PDLIM7-201ENST00000355572 ADAMTS7Q9UKP4 1686 aa22.75■■□□□ 1.23
PDLIM7-201ENST00000355572 PLEKHO1Q53GL0 409 aaPredicted RBP22.75■■□□□ 1.23
PDLIM7-201ENST00000355572 TJP1Q07157 1748 aa22.74■■□□□ 1.23
PDLIM7-201ENST00000355572 LOC102724428A0A0B4J2F2 783 aa22.74■■□□□ 1.23
PDLIM7-201ENST00000355572 SIK1P57059 783 aa22.74■■□□□ 1.23
PDLIM7-201ENST00000355572 SYT17Q9BSW7 474 aa22.74■■□□□ 1.23
PDLIM7-201ENST00000355572 SMARCC1Q92922 1105 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms