RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.44■□□□□ 0.38
LMX1B-201ENST00000355497 MVPQ14764 893 aaKnown RBP17.44■□□□□ 0.38
LMX1B-201ENST00000355497 KIF2AO00139 706 aaPredicted RBP17.43■□□□□ 0.38
LMX1B-201ENST00000355497 CFAP100Q494V2 611 aa17.43■□□□□ 0.38
LMX1B-201ENST00000355497 CWC27Q6UX04 472 aaKnown RBP17.43■□□□□ 0.38
LMX1B-201ENST00000355497 RRP9O43818 475 aaKnown RBP17.43■□□□□ 0.38
LMX1B-201ENST00000355497 CETN2P41208 172 aa17.43■□□□□ 0.38
LMX1B-201ENST00000355497 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
LMX1B-201ENST00000355497 ESPNB1AK53 854 aa17.42■□□□□ 0.38
LMX1B-201ENST00000355497 SPA17Q15506 151 aa17.42■□□□□ 0.38
LMX1B-201ENST00000355497 ATF7IPQ6VMQ6 1270 aa17.42■□□□□ 0.38
LMX1B-201ENST00000355497 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
LMX1B-201ENST00000355497 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
LMX1B-201ENST00000355497 ZSCAN12O43309 604 aa17.41■□□□□ 0.38
LMX1B-201ENST00000355497 TRIM21P19474 475 aaKnown RBP17.41■□□□□ 0.38
LMX1B-201ENST00000355497 WIZO95785 1651 aa17.41■□□□□ 0.38
LMX1B-201ENST00000355497 PPP1R12BO60237 982 aaPredicted RBP17.41■□□□□ 0.38
LMX1B-201ENST00000355497 CCDC97Q96F63 343 aaPredicted RBP17.41■□□□□ 0.38
LMX1B-201ENST00000355497 STRN4Q9NRL3 753 aa17.41■□□□□ 0.38
LMX1B-201ENST00000355497 MCM4P33991 863 aa17.41■□□□□ 0.38
LMX1B-201ENST00000355497 ANKRD50Q9ULJ7 1429 aa17.41■□□□□ 0.38
LMX1B-201ENST00000355497 MYL6BP14649 208 aa17.41■□□□□ 0.38
LMX1B-201ENST00000355497 CASQ1P31415 396 aa17.41■□□□□ 0.38
LMX1B-201ENST00000355497 IMMTQ16891 758 aaKnown RBP17.41■□□□□ 0.38
LMX1B-201ENST00000355497 MAP9Q49MG5 647 aa17.4■□□□□ 0.38
LMX1B-201ENST00000355497 RAI14Q9P0K7 980 aa17.4■□□□□ 0.38
LMX1B-201ENST00000355497 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
LMX1B-201ENST00000355497 SULT6B1Q6IMI4 303 aa17.4■□□□□ 0.38
LMX1B-201ENST00000355497 SRGAP3O43295 1099 aa17.39■□□□□ 0.38
LMX1B-201ENST00000355497 MCM3P25205 808 aa17.39■□□□□ 0.38
LMX1B-201ENST00000355497 CYB5RLQ6IPT4 315 aa17.39■□□□□ 0.38
LMX1B-201ENST00000355497 GOLGA6L10A0A0M3HER8 536 aa17.39■□□□□ 0.37
LMX1B-201ENST00000355497 CAMK4Q16566 473 aa17.39■□□□□ 0.37
LMX1B-201ENST00000355497 CCDC113Q9H0I3 377 aa17.39■□□□□ 0.37
LMX1B-201ENST00000355497 CASTP20810 708 aaKnown RBP17.39■□□□□ 0.37
LMX1B-201ENST00000355497 PTPN14Q15678 1187 aa17.39■□□□□ 0.37
LMX1B-201ENST00000355497 SYCE3A1L190 88 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 KIF5CO60282 957 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
LMX1B-201ENST00000355497 ZSCAN29Q8IWY8 852 aaPredicted RBP17.38■□□□□ 0.37
LMX1B-201ENST00000355497 SFPQP23246 707 aaKnown RBP eCLIP17.38■□□□□ 0.37
LMX1B-201ENST00000355497 FKBP15Q5T1M5 1219 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 AKNAQ7Z591 1439 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 ZSCAN30Q86W11 494 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 PIBF1Q8WXW3 757 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 DNAI2Q9GZS0 605 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 PODXL2Q9NZ53 605 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 USP5P45974 858 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 TSG101Q99816 390 aa17.38■□□□□ 0.37
LMX1B-201ENST00000355497 STAMBPO95630 424 aa17.37■□□□□ 0.37
LMX1B-201ENST00000355497 CEP126Q9P2H0 1117 aa17.37■□□□□ 0.37
LMX1B-201ENST00000355497 CFAP70Q5T0N1 1121 aa17.37■□□□□ 0.37
LMX1B-201ENST00000355497 DDX11Q96FC9 970 aa17.37■□□□□ 0.37
LMX1B-201ENST00000355497 NF2P35240 595 aa17.36■□□□□ 0.37
LMX1B-201ENST00000355497 ANAPC15P60006 121 aa17.36■□□□□ 0.37
LMX1B-201ENST00000355497 PRAM1Q96QH2 718 aa17.36■□□□□ 0.37
LMX1B-201ENST00000355497 LRP2BPQ9P2M1 347 aa17.36■□□□□ 0.37
LMX1B-201ENST00000355497 ZNF644Q9H582 1327 aaPredicted RBP17.36■□□□□ 0.37
LMX1B-201ENST00000355497 AIDAQ96BJ3 306 aa17.36■□□□□ 0.37
LMX1B-201ENST00000355497 ANO10Q9NW15 660 aa17.36■□□□□ 0.37
LMX1B-201ENST00000355497 CCDC178Q5BJE1 867 aa17.35■□□□□ 0.37
LMX1B-201ENST00000355497 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
LMX1B-201ENST00000355497 PPP1R1BQ9UD71 204 aaPredicted RBP17.35■□□□□ 0.37
LMX1B-201ENST00000355497 IFFO1Q0D2I5 559 aa17.35■□□□□ 0.37
LMX1B-201ENST00000355497 TNIP1Q15025 636 aa17.35■□□□□ 0.37
LMX1B-201ENST00000355497 GCOM1H8Y6P7 765 aaPredicted RBP17.34■□□□□ 0.37
LMX1B-201ENST00000355497 MYZAPP0CAP1 466 aa17.34■□□□□ 0.37
LMX1B-201ENST00000355497 LUZP1Q86V48 1076 aa17.34■□□□□ 0.37
LMX1B-201ENST00000355497 DDX54Q8TDD1 881 aaKnown RBP17.34■□□□□ 0.37
LMX1B-201ENST00000355497 VPS36Q86VN1 386 aa17.34■□□□□ 0.37
LMX1B-201ENST00000355497 IL1RAPL2Q9NP60 686 aa17.34■□□□□ 0.37
LMX1B-201ENST00000355497 SEC63Q9UGP8 760 aaKnown RBP17.34■□□□□ 0.37
LMX1B-201ENST00000355497 FAM69CQ0P6D2 419 aa17.34■□□□□ 0.37
LMX1B-201ENST00000355497 KIF18AQ8NI77 898 aa17.34■□□□□ 0.37
LMX1B-201ENST00000355497 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
LMX1B-201ENST00000355497 CACNA2D4Q7Z3S7 1137 aa17.34■□□□□ 0.37
LMX1B-201ENST00000355497 RPAP2Q8IXW5 612 aaPredicted RBP17.34■□□□□ 0.37
LMX1B-201ENST00000355497 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
LMX1B-201ENST00000355497 CCDC183Q5T5S1 534 aa17.34■□□□□ 0.37
LMX1B-201ENST00000355497 GOPCQ9HD26 462 aa17.34■□□□□ 0.37
LMX1B-201ENST00000355497 SMC1AQ14683 1233 aaKnown RBP17.33■□□□□ 0.37
LMX1B-201ENST00000355497 CEP63Q96MT8 703 aa17.33■□□□□ 0.37
LMX1B-201ENST00000355497 BTBD11A6QL63 1104 aa17.33■□□□□ 0.36
LMX1B-201ENST00000355497 MICALCLQ6ZW33 695 aa17.33■□□□□ 0.36
LMX1B-201ENST00000355497 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
LMX1B-201ENST00000355497 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
LMX1B-201ENST00000355497 KIF4BQ2VIQ3 1234 aa17.33■□□□□ 0.36
LMX1B-201ENST00000355497 CDK19Q9BWU1 502 aa17.33■□□□□ 0.36
LMX1B-201ENST00000355497 CGNQ9P2M7 1197 aaKnown RBP17.33■□□□□ 0.36
LMX1B-201ENST00000355497 IGHMBP2P38935 993 aaKnown RBP17.33■□□□□ 0.36
LMX1B-201ENST00000355497 TOP1P11387 765 aaKnown RBP17.32■□□□□ 0.36
LMX1B-201ENST00000355497 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
LMX1B-201ENST00000355497 TICAM2Q86XR7 235 aa17.32■□□□□ 0.36
LMX1B-201ENST00000355497 CCDC83Q8IWF9 413 aa17.32■□□□□ 0.36
LMX1B-201ENST00000355497 PROSER2Q86WR7 435 aaPredicted RBP17.32■□□□□ 0.36
LMX1B-201ENST00000355497 NUTM1Q86Y26 1132 aa17.32■□□□□ 0.36
LMX1B-201ENST00000355497 GSTTP1A0A1W2PQM5 241 aa17.32■□□□□ 0.36
LMX1B-201ENST00000355497 URI1O94763 535 aaPredicted RBP17.32■□□□□ 0.36
LMX1B-201ENST00000355497 PHAXQ9H814 394 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms