RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TAF1LQ8IZX4 1826 aa22.29■■□□□ 1.16
PDGFA-201ENST00000354513 MAP2P11137 1827 aaKnown RBP22.28■■□□□ 1.16
PDGFA-201ENST00000354513 SLC24A1O60721 1099 aa22.28■■□□□ 1.16
PDGFA-201ENST00000354513 C5P01031 1676 aa22.27■■□□□ 1.16
PDGFA-201ENST00000354513 AMPHP49418 695 aa22.27■■□□□ 1.16
PDGFA-201ENST00000354513 DDX54Q8TDD1 881 aaKnown RBP22.27■■□□□ 1.16
PDGFA-201ENST00000354513 NBPF6Q5VWK0 638 aa22.25■■□□□ 1.15
PDGFA-201ENST00000354513 NBPF4Q96M43 638 aa22.25■■□□□ 1.15
PDGFA-201ENST00000354513 MTFR1LQ9H019 292 aa22.25■■□□□ 1.15
PDGFA-201ENST00000354513 USHBP1Q8N6Y0 703 aa22.24■■□□□ 1.15
PDGFA-201ENST00000354513 AKT1S1Q96B36 256 aa22.24■■□□□ 1.15
PDGFA-201ENST00000354513 CARD14Q9BXL6 1004 aa22.24■■□□□ 1.15
PDGFA-201ENST00000354513 CHD4Q14839 1912 aa22.24■■□□□ 1.15
PDGFA-201ENST00000354513 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
PDGFA-201ENST00000354513 INSRP06213 1382 aa22.23■■□□□ 1.15
PDGFA-201ENST00000354513 NCAPD2Q15021 1401 aa22.22■■□□□ 1.15
PDGFA-201ENST00000354513 YY1P25490 414 aa22.21■■□□□ 1.15
PDGFA-201ENST00000354513 ZCRB1Q8TBF4 217 aaKnown RBP22.21■■□□□ 1.15
PDGFA-201ENST00000354513 FLT4P35916 1363 aa22.21■■□□□ 1.15
PDGFA-201ENST00000354513 PRIM1P49642 420 aaKnown RBP22.2■■□□□ 1.14
PDGFA-201ENST00000354513 KCNQ4P56696 695 aa22.2■■□□□ 1.14
PDGFA-201ENST00000354513 HSP90AB2PQ58FF8 381 aa22.2■■□□□ 1.14
PDGFA-201ENST00000354513 FHDC1Q9C0D6 1143 aaPredicted RBP22.2■■□□□ 1.14
PDGFA-201ENST00000354513 SMG6Q86US8 1419 aaKnown RBP22.2■■□□□ 1.14
PDGFA-201ENST00000354513 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
PDGFA-201ENST00000354513 PNPLA7Q6ZV29 1317 aa22.19■■□□□ 1.14
PDGFA-201ENST00000354513 UTRNP46939 3433 aa22.18■■□□□ 1.14
PDGFA-201ENST00000354513 SLC27A3Q5K4L6 730 aa22.18■■□□□ 1.14
PDGFA-201ENST00000354513 MAP3K5Q99683 1374 aa22.17■■□□□ 1.14
PDGFA-201ENST00000354513 SYT17Q9BSW7 474 aa22.17■■□□□ 1.14
PDGFA-201ENST00000354513 SYTL4Q96C24 671 aaPredicted RBP22.16■■□□□ 1.14
PDGFA-201ENST00000354513 CDCA8Q53HL2 280 aa22.15■■□□□ 1.14
PDGFA-201ENST00000354513 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
PDGFA-201ENST00000354513 CGNL1Q0VF96 1302 aa22.15■■□□□ 1.14
PDGFA-201ENST00000354513 UBR3Q6ZT12 1888 aa22.14■■□□□ 1.14
PDGFA-201ENST00000354513 ARXQ96QS3 562 aa22.13■■□□□ 1.13
PDGFA-201ENST00000354513 C4BP0C0L5 1744 aa22.13■■□□□ 1.13
PDGFA-201ENST00000354513 RAPGEF4Q8WZA2 1011 aa22.11■■□□□ 1.13
PDGFA-201ENST00000354513 TIMELESSQ9UNS1 1208 aa22.11■■□□□ 1.13
PDGFA-201ENST00000354513 TATP17735 454 aaPredicted RBP22.1■■□□□ 1.13
PDGFA-201ENST00000354513 CLSPNQ9HAW4 1339 aa22.1■■□□□ 1.13
PDGFA-201ENST00000354513 CYP27B1O15528 508 aa22.09■■□□□ 1.13
PDGFA-201ENST00000354513 PCDH11XQ9BZA7 1347 aa22.09■■□□□ 1.13
PDGFA-201ENST00000354513 PCDH11YQ9BZA8 1340 aa22.09■■□□□ 1.13
PDGFA-201ENST00000354513 SLC16A10Q8TF71 515 aa22.08■■□□□ 1.13
PDGFA-201ENST00000354513 CCNL1Q9UK58 526 aaPredicted RBP22.08■■□□□ 1.13
PDGFA-201ENST00000354513 DCAF8L1A6NGE4 600 aa22.07■■□□□ 1.12
PDGFA-201ENST00000354513 TFCP2L1Q9NZI6 479 aa22.06■■□□□ 1.12
PDGFA-201ENST00000354513 PALLDQ8WX93 1383 aa22.05■■□□□ 1.12
PDGFA-201ENST00000354513 WASHC2AQ641Q2 1341 aa22.05■■□□□ 1.12
PDGFA-201ENST00000354513 COL23A1Q86Y22 540 aaPredicted RBP22.04■■□□□ 1.12
PDGFA-201ENST00000354513 GOLGB1Q14789 3259 aaKnown RBP22.03■■□□□ 1.12
PDGFA-201ENST00000354513 PCGF6Q9BYE7 350 aa22.03■■□□□ 1.12
PDGFA-201ENST00000354513 POLKQ9UBT6 870 aa22.03■■□□□ 1.12
PDGFA-201ENST00000354513 EYA1Q99502 592 aa22.02■■□□□ 1.12
PDGFA-201ENST00000354513 COL5A3P25940 1745 aaPredicted RBP22.01■■□□□ 1.11
PDGFA-201ENST00000354513 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
PDGFA-201ENST00000354513 NKX1-1Q15270 411 aaPredicted RBP22■■□□□ 1.11
PDGFA-201ENST00000354513 MPRIPQ6WCQ1 1025 aa22■■□□□ 1.11
PDGFA-201ENST00000354513 AMIGO3Q86WK7 504 aa22■■□□□ 1.11
PDGFA-201ENST00000354513 NLGN2Q8NFZ4 835 aa22■■□□□ 1.11
PDGFA-201ENST00000354513 ZNF831Q5JPB2 1677 aa22■■□□□ 1.11
PDGFA-201ENST00000354513 POLD1P28340 1107 aa21.98■■□□□ 1.11
PDGFA-201ENST00000354513 ZNF784Q8NCA9 323 aaPredicted RBP21.98■■□□□ 1.11
PDGFA-201ENST00000354513 VIRMAQ69YN4 1812 aaKnown RBP21.98■■□□□ 1.11
PDGFA-201ENST00000354513 HSPA5P11021 654 aaKnown RBP21.97■■□□□ 1.11
PDGFA-201ENST00000354513 PIGBQ92521 554 aa21.97■■□□□ 1.11
PDGFA-201ENST00000354513 EIF4A2Q14240 407 aaKnown RBP21.96■■□□□ 1.11
PDGFA-201ENST00000354513 KLHL34Q8N239 644 aa21.96■■□□□ 1.11
PDGFA-201ENST00000354513 MSL1Q68DK7 614 aa21.95■■□□□ 1.1
PDGFA-201ENST00000354513 POLR3GLQ9BT43 218 aa21.95■■□□□ 1.1
PDGFA-201ENST00000354513 KIAA1551Q9HCM1 1747 aa21.95■■□□□ 1.1
PDGFA-201ENST00000354513 PHKG2P15735 406 aa21.93■■□□□ 1.1
PDGFA-201ENST00000354513 SMIM5Q71RC9 77 aa21.93■■□□□ 1.1
PDGFA-201ENST00000354513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.93■■□□□ 1.1
PDGFA-201ENST00000354513 SPG7Q9UQ90 795 aa21.93■■□□□ 1.1
PDGFA-201ENST00000354513 C4AP0C0L4 1744 aa21.93■■□□□ 1.1
PDGFA-201ENST00000354513 IGSF1Q8N6C5 1336 aa21.93■■□□□ 1.1
PDGFA-201ENST00000354513 PLEKHG2Q9H7P9 1386 aa21.92■■□□□ 1.1
PDGFA-201ENST00000354513 KIF13BQ9NQT8 1826 aa21.92■■□□□ 1.1
PDGFA-201ENST00000354513 TNNT2P45379 298 aaPredicted RBP21.92■■□□□ 1.1
PDGFA-201ENST00000354513 EIF4G2P78344 907 aaKnown RBP eCLIP21.92■■□□□ 1.1
PDGFA-201ENST00000354513 SCN11AQ9UI33 1791 aa21.92■■□□□ 1.1
PDGFA-201ENST00000354513 MSH5O43196 834 aa21.91■■□□□ 1.1
PDGFA-201ENST00000354513 SMARCC1Q92922 1105 aaPredicted RBP21.91■■□□□ 1.1
PDGFA-201ENST00000354513 PANK3Q9H999 370 aa21.91■■□□□ 1.1
PDGFA-201ENST00000354513 KDRP35968 1356 aa21.91■■□□□ 1.1
PDGFA-201ENST00000354513 CICQ96RK0 1608 aaPredicted RBP21.9■■□□□ 1.1
PDGFA-201ENST00000354513 YBX3P16989 372 aaKnown RBP eCLIP21.9■■□□□ 1.1
PDGFA-201ENST00000354513 GPR162Q16538 588 aa21.9■■□□□ 1.1
PDGFA-201ENST00000354513 LINC00116Q8NCU8 138 aa21.9■■□□□ 1.1
PDGFA-201ENST00000354513 KDM6AO15550 1401 aaPredicted RBP21.89■■□□□ 1.1
PDGFA-201ENST00000354513 TJP1Q07157 1748 aa21.89■■□□□ 1.1
PDGFA-201ENST00000354513 MYH14Q7Z406 1995 aaKnown RBP21.89■■□□□ 1.1
PDGFA-201ENST00000354513 ITPK1Q13572 414 aa21.88■■□□□ 1.09
PDGFA-201ENST00000354513 ASAP1Q9ULH1 1129 aa21.88■■□□□ 1.09
PDGFA-201ENST00000354513 LOC102724428A0A0B4J2F2 783 aa21.87■■□□□ 1.09
PDGFA-201ENST00000354513 SIK1P57059 783 aa21.87■■□□□ 1.09
PDGFA-201ENST00000354513 IFNL2Q8IZJ0 200 aa21.87■■□□□ 1.09
PDGFA-201ENST00000354513 AK7Q96M32 723 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms