RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 CFAP44Q96MT7 982 aa26.58■■□□□ 1.85
TRIM4-202ENST00000354241 GNAT3A8MTJ3 354 aa26.57■■□□□ 1.84
TRIM4-202ENST00000354241 MAP3K5Q99683 1374 aa26.56■■□□□ 1.84
TRIM4-202ENST00000354241 CT47B1P0C2W7 299 aaPredicted RBP26.56■■□□□ 1.84
TRIM4-202ENST00000354241 RARSP54136 660 aaKnown RBP26.56■■□□□ 1.84
TRIM4-202ENST00000354241 MBIPQ9NS73 344 aa26.56■■□□□ 1.84
TRIM4-202ENST00000354241 HTATSF1O43719 755 aaKnown RBP26.55■■□□□ 1.84
TRIM4-202ENST00000354241 COL22A1Q8NFW1 1626 aaPredicted RBP26.55■■□□□ 1.84
TRIM4-202ENST00000354241 PLEKHO1Q53GL0 409 aaPredicted RBP26.54■■□□□ 1.84
TRIM4-202ENST00000354241 COL16A1Q07092 1604 aaPredicted RBP26.53■■□□□ 1.84
TRIM4-202ENST00000354241 PPP4R2Q9NY27 417 aa26.53■■□□□ 1.84
TRIM4-202ENST00000354241 CRB1P82279 1406 aa26.53■■□□□ 1.84
TRIM4-202ENST00000354241 UBAP1LF5GYI3 381 aa26.53■■□□□ 1.84
TRIM4-202ENST00000354241 AMOTQ4VCS5 1084 aa26.52■■□□□ 1.84
TRIM4-202ENST00000354241 LRRC37A3O60309 1634 aa26.52■■□□□ 1.84
TRIM4-202ENST00000354241 BCL2L13Q9BXK5 485 aa26.51■■□□□ 1.83
TRIM4-202ENST00000354241 ZNF530Q6P9A1 599 aaPredicted RBP26.5■■□□□ 1.83
TRIM4-202ENST00000354241 RAPGEF4Q8WZA2 1011 aa26.5■■□□□ 1.83
TRIM4-202ENST00000354241 COL5A2P05997 1499 aaPredicted RBP26.5■■□□□ 1.83
TRIM4-202ENST00000354241 C20orf194Q5TEA3 1177 aa26.49■■□□□ 1.83
TRIM4-202ENST00000354241 CANXP27824 592 aaKnown RBP26.49■■□□□ 1.83
TRIM4-202ENST00000354241 EXOC6Q8TAG9 804 aa26.49■■□□□ 1.83
TRIM4-202ENST00000354241 WDR17Q8IZU2 1322 aa26.48■■□□□ 1.83
TRIM4-202ENST00000354241 CHL1O00533 1208 aa26.48■■□□□ 1.83
TRIM4-202ENST00000354241 TATP17735 454 aaPredicted RBP26.47■■□□□ 1.83
TRIM4-202ENST00000354241 AKAP4Q5JQC9 854 aa26.47■■□□□ 1.83
TRIM4-202ENST00000354241 IL17REQ8NFR9 667 aa26.47■■□□□ 1.83
TRIM4-202ENST00000354241 FRAT1Q92837 279 aaPredicted RBP26.47■■□□□ 1.83
TRIM4-202ENST00000354241 C1orf141Q5JVX7 400 aa26.46■■□□□ 1.83
TRIM4-202ENST00000354241 TOM1L2Q6ZVM7 507 aa26.46■■□□□ 1.83
TRIM4-202ENST00000354241 CRBNQ96SW2 442 aa26.46■■□□□ 1.83
TRIM4-202ENST00000354241 VIRMAQ69YN4 1812 aaKnown RBP26.46■■□□□ 1.83
TRIM4-202ENST00000354241 SMC4Q9NTJ3 1288 aa26.45■■□□□ 1.83
TRIM4-202ENST00000354241 MEGF6O75095 1541 aa26.45■■□□□ 1.83
TRIM4-202ENST00000354241 STRN4Q9NRL3 753 aa26.45■■□□□ 1.82
TRIM4-202ENST00000354241 COL14A1Q05707 1796 aaKnown RBP26.44■■□□□ 1.82
TRIM4-202ENST00000354241 ELL2O00472 640 aaPredicted RBP26.44■■□□□ 1.82
TRIM4-202ENST00000354241 EVA1CP58658 441 aa26.44■■□□□ 1.82
TRIM4-202ENST00000354241 TSPYL6Q8N831 410 aa26.44■■□□□ 1.82
TRIM4-202ENST00000354241 MIS18AQ9NYP9 233 aa26.44■■□□□ 1.82
TRIM4-202ENST00000354241 SSH1Q8WYL5 1049 aa26.43■■□□□ 1.82
TRIM4-202ENST00000354241 TSPYL4Q9UJ04 414 aa26.43■■□□□ 1.82
TRIM4-202ENST00000354241 TWISTNBQ3B726 338 aaPredicted RBP26.43■■□□□ 1.82
TRIM4-202ENST00000354241 C8orf58Q8NAV2 365 aa26.43■■□□□ 1.82
TRIM4-202ENST00000354241 VAMP4O75379 141 aa26.42■■□□□ 1.82
TRIM4-202ENST00000354241 B4GALNT3Q6L9W6 998 aa26.41■■□□□ 1.82
TRIM4-202ENST00000354241 ZNF428Q96B54 188 aa26.41■■□□□ 1.82
TRIM4-202ENST00000354241 LGR6Q9HBX8 967 aa26.41■■□□□ 1.82
TRIM4-202ENST00000354241 CEMIPQ8WUJ3 1361 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 ALDH1L2Q3SY69 923 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 MPRIPQ6WCQ1 1025 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 CERKQ8TCT0 537 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 BTG4Q9NY30 223 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 SPG7Q9UQ90 795 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 PARP4Q9UKK3 1724 aaKnown RBP26.4■■□□□ 1.82
TRIM4-202ENST00000354241 PKD1L3Q7Z443 1732 aa26.39■■□□□ 1.82
TRIM4-202ENST00000354241 TAF7Q15545 349 aaPredicted RBP26.39■■□□□ 1.81
TRIM4-202ENST00000354241 LARP1Q6PKG0 1096 aaKnown RBP26.39■■□□□ 1.81
TRIM4-202ENST00000354241 PDE3AQ14432 1141 aa26.37■■□□□ 1.81
TRIM4-202ENST00000354241 KRT24Q2M2I5 525 aa26.37■■□□□ 1.81
TRIM4-202ENST00000354241 CARD10Q9BWT7 1032 aa26.37■■□□□ 1.81
TRIM4-202ENST00000354241 PLEKHG2Q9H7P9 1386 aa26.37■■□□□ 1.81
TRIM4-202ENST00000354241 RNMTO43148 476 aaKnown RBP26.37■■□□□ 1.81
TRIM4-202ENST00000354241 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.37■■□□□ 1.813e-9■■■■■ 35
TRIM4-202ENST00000354241 PELP1Q8IZL8 1130 aaKnown RBP26.36■■□□□ 1.81
TRIM4-202ENST00000354241 ZKSCAN2Q63HK3 967 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 CCDC136Q96JN2 1154 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 OVOS2A0A0G2JMS6 1433 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 ADAMTS2O95450 1211 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 TEFQ10587 303 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 BABAM1Q9NWV8 329 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 NUTM2BA6NNL0 878 aaPredicted RBP26.34■■□□□ 1.81
TRIM4-202ENST00000354241 NUTM2EB1AL46 878 aaPredicted RBP26.34■■□□□ 1.81
TRIM4-202ENST00000354241 NUTM2AQ8IVF1 878 aaPredicted RBP26.34■■□□□ 1.81
TRIM4-202ENST00000354241 PANK1Q8TE04 598 aa26.34■■□□□ 1.81
TRIM4-202ENST00000354241 KIF16BQ96L93 1317 aa26.34■■□□□ 1.81
TRIM4-202ENST00000354241 NOB1Q9ULX3 412 aaKnown RBP26.33■■□□□ 1.81
TRIM4-202ENST00000354241 TNNQ9UQP3 1299 aa26.33■■□□□ 1.81
TRIM4-202ENST00000354241 PLCH1Q4KWH8 1693 aa26.33■■□□□ 1.81
TRIM4-202ENST00000354241 TCERG1O14776 1098 aaKnown RBP26.33■■□□□ 1.81
TRIM4-202ENST00000354241 PHKG2P15735 406 aa26.33■■□□□ 1.81
TRIM4-202ENST00000354241 ADAMTS7Q9UKP4 1686 aa26.33■■□□□ 1.81
TRIM4-202ENST00000354241 IFNL2Q8IZJ0 200 aa26.32■■□□□ 1.8
TRIM4-202ENST00000354241 SCN11AQ9UI33 1791 aa26.32■■□□□ 1.8
TRIM4-202ENST00000354241 MRPL50Q8N5N7 158 aaKnown RBP26.31■■□□□ 1.8
TRIM4-202ENST00000354241 KDM3BQ7LBC6 1761 aa26.31■■□□□ 1.8
TRIM4-202ENST00000354241 IL2RBP14784 551 aa26.31■■□□□ 1.8
TRIM4-202ENST00000354241 CLUAP1Q96AJ1 413 aa26.31■■□□□ 1.8
TRIM4-202ENST00000354241 USP35Q9P2H5 1018 aa26.3■■□□□ 1.8
TRIM4-202ENST00000354241 SIPA1L3O60292 1781 aaPredicted RBP26.3■■□□□ 1.8
TRIM4-202ENST00000354241 COG6Q9Y2V7 657 aa26.29■■□□□ 1.8
TRIM4-202ENST00000354241 IPO8O15397 1037 aaKnown RBP26.29■■□□□ 1.8
TRIM4-202ENST00000354241 BRPF1P55201 1214 aaPredicted RBP26.29■■□□□ 1.8
TRIM4-202ENST00000354241 FTSJ3Q8IY81 847 aaKnown RBP26.29■■□□□ 1.8
TRIM4-202ENST00000354241 CYP27B1O15528 508 aa26.28■■□□□ 1.8
TRIM4-202ENST00000354241 MS4A1P11836 297 aa26.28■■□□□ 1.8
TRIM4-202ENST00000354241 RLBP1P12271 317 aa26.28■■□□□ 1.8
TRIM4-202ENST00000354241 ATF7IPQ6VMQ6 1270 aa26.28■■□□□ 1.8
TRIM4-202ENST00000354241 KDM6AO15550 1401 aaPredicted RBP26.28■■□□□ 1.8
TRIM4-202ENST00000354241 BTBD11A6QL63 1104 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms