RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 UNC5CLQ8IV45 518 aa26.37■■□□□ 1.81
SIGMAR1-202ENST00000353468 USP35Q9P2H5 1018 aa26.37■■□□□ 1.81
SIGMAR1-202ENST00000353468 DLG5Q8TDM6 1919 aa26.37■■□□□ 1.81
SIGMAR1-202ENST00000353468 GOLGA2Q08379 1002 aa26.37■■□□□ 1.81
SIGMAR1-202ENST00000353468 WDR63Q8IWG1 891 aa26.37■■□□□ 1.81
SIGMAR1-202ENST00000353468 MEGF6O75095 1541 aa26.36■■□□□ 1.81
SIGMAR1-202ENST00000353468 PLEKHG2Q9H7P9 1386 aa26.36■■□□□ 1.81
SIGMAR1-202ENST00000353468 CDCA7LQ96GN5 454 aa26.35■■□□□ 1.81
SIGMAR1-202ENST00000353468 IL2RBP14784 551 aa26.34■■□□□ 1.81
SIGMAR1-202ENST00000353468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.34■■□□□ 1.81
SIGMAR1-202ENST00000353468 BCL9LQ86UU0 1499 aa26.34■■□□□ 1.81
SIGMAR1-202ENST00000353468 ZNF530Q6P9A1 599 aaPredicted RBP26.33■■□□□ 1.8
SIGMAR1-202ENST00000353468 USP21Q9UK80 565 aa26.33■■□□□ 1.8
SIGMAR1-202ENST00000353468 GNAT3A8MTJ3 354 aa26.32■■□□□ 1.8
SIGMAR1-202ENST00000353468 SPG7Q9UQ90 795 aa26.32■■□□□ 1.8
SIGMAR1-202ENST00000353468 SPATA31A1Q5TZJ5 1347 aa26.31■■□□□ 1.8
SIGMAR1-202ENST00000353468 HTATSF1O43719 755 aaKnown RBP26.31■■□□□ 1.8
SIGMAR1-202ENST00000353468 RTF1Q92541 710 aaKnown RBP26.31■■□□□ 1.8
SIGMAR1-202ENST00000353468 OVOS2A0A0G2JMS6 1433 aa26.31■■□□□ 1.8
SIGMAR1-202ENST00000353468 SPATA31A5Q5VU36 1347 aa26.31■■□□□ 1.8
SIGMAR1-202ENST00000353468 SPATA31A7Q8IWB4 1347 aa26.31■■□□□ 1.8
SIGMAR1-202ENST00000353468 DCTN1Q14203 1278 aa26.3■■□□□ 1.8
SIGMAR1-202ENST00000353468 THRAP3Q9Y2W1 955 aaKnown RBP26.3■■□□□ 1.8
SIGMAR1-202ENST00000353468 CCDC9Q9Y3X0 531 aaKnown RBP26.3■■□□□ 1.8
SIGMAR1-202ENST00000353468 MAP3K5Q99683 1374 aa26.3■■□□□ 1.8
SIGMAR1-202ENST00000353468 SLFN5Q08AF3 891 aa26.29■■□□□ 1.8
SIGMAR1-202ENST00000353468 VPS72Q15906 364 aa26.29■■□□□ 1.8
SIGMAR1-202ENST00000353468 AKAP4Q5JQC9 854 aa26.29■■□□□ 1.8
SIGMAR1-202ENST00000353468 SPINK5Q9NQ38 1064 aaPredicted RBP26.29■■□□□ 1.8
SIGMAR1-202ENST00000353468 E9PSI1 815 aa26.29■■□□□ 1.8
SIGMAR1-202ENST00000353468 C1orf141Q5JVX7 400 aa26.29■■□□□ 1.8
SIGMAR1-202ENST00000353468 THUMPD2Q9BTF0 503 aaKnown RBP26.29■■□□□ 1.8
SIGMAR1-202ENST00000353468 PARP4Q9UKK3 1724 aaKnown RBP26.29■■□□□ 1.8
SIGMAR1-202ENST00000353468 AFF2P51816 1311 aa26.28■■□□□ 1.8
SIGMAR1-202ENST00000353468 ZCRB1Q8TBF4 217 aaKnown RBP26.28■■□□□ 1.8
SIGMAR1-202ENST00000353468 CALD1Q05682 793 aaKnown RBP26.27■■□□□ 1.8
SIGMAR1-202ENST00000353468 MCM10Q7L590 875 aa26.27■■□□□ 1.8
SIGMAR1-202ENST00000353468 IL16Q14005 1332 aa26.27■■□□□ 1.8
SIGMAR1-202ENST00000353468 DISP2A7MBM2 1401 aa26.26■■□□□ 1.79
SIGMAR1-202ENST00000353468 PKD1L3Q7Z443 1732 aa26.26■■□□□ 1.79
SIGMAR1-202ENST00000353468 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.26■■□□□ 1.79
SIGMAR1-202ENST00000353468 TRMT2AQ8IZ69 625 aaKnown RBP26.25■■□□□ 1.79
SIGMAR1-202ENST00000353468 CDCA7Q9BWT1 371 aaPredicted RBP26.24■■□□□ 1.79
SIGMAR1-202ENST00000353468 DUSP27Q5VZP5 1158 aa26.24■■□□□ 1.79
SIGMAR1-202ENST00000353468 IFNL2Q8IZJ0 200 aa26.24■■□□□ 1.79
SIGMAR1-202ENST00000353468 IL17REQ8NFR9 667 aa26.24■■□□□ 1.79
SIGMAR1-202ENST00000353468 PHKG2P15735 406 aa26.23■■□□□ 1.79
SIGMAR1-202ENST00000353468 BARGINQ6ZT62 677 aa26.23■■□□□ 1.79
SIGMAR1-202ENST00000353468 CYP27B1O15528 508 aa26.22■■□□□ 1.79
SIGMAR1-202ENST00000353468 PCDH11XQ9BZA7 1347 aa26.21■■□□□ 1.79
SIGMAR1-202ENST00000353468 PCDH11YQ9BZA8 1340 aa26.21■■□□□ 1.79
SIGMAR1-202ENST00000353468 MYH16Q9H6N6 1097 aa26.21■■□□□ 1.79
SIGMAR1-202ENST00000353468 MPRIPQ6WCQ1 1025 aa26.2■■□□□ 1.79
SIGMAR1-202ENST00000353468 GNAI1P63096 354 aa26.2■■□□□ 1.78
SIGMAR1-202ENST00000353468 LGR6Q9HBX8 967 aa26.2■■□□□ 1.78
SIGMAR1-202ENST00000353468 IFT57Q9NWB7 429 aa26.2■■□□□ 1.78
SIGMAR1-202ENST00000353468 LAS1LQ9Y4W2 734 aaKnown RBP26.2■■□□□ 1.78
SIGMAR1-202ENST00000353468 WNK3Q9BYP7 1800 aa26.19■■□□□ 1.78
SIGMAR1-202ENST00000353468 RNMTO43148 476 aaKnown RBP26.19■■□□□ 1.78
SIGMAR1-202ENST00000353468 CFAP44Q96MT7 982 aa26.19■■□□□ 1.78
SIGMAR1-202ENST00000353468 TRPC5Q9UL62 973 aaPredicted RBP26.19■■□□□ 1.78
SIGMAR1-202ENST00000353468 CEMIPQ8WUJ3 1361 aa26.18■■□□□ 1.78
SIGMAR1-202ENST00000353468 EXOC5O00471 708 aa26.18■■□□□ 1.78
SIGMAR1-202ENST00000353468 ZNF853P0CG23 659 aa26.18■■□□□ 1.78
SIGMAR1-202ENST00000353468 HSP90AB1P08238 724 aaKnown RBP26.17■■□□□ 1.78
SIGMAR1-202ENST00000353468 DDX54Q8TDD1 881 aaKnown RBP26.17■■□□□ 1.78
SIGMAR1-202ENST00000353468 GJD4Q96KN9 370 aaPredicted RBP26.16■■□□□ 1.78
SIGMAR1-202ENST00000353468 ATRNO75882 1429 aa26.16■■□□□ 1.78
SIGMAR1-202ENST00000353468 FAM98CQ17RN3 349 aaKnown RBP26.16■■□□□ 1.78
SIGMAR1-202ENST00000353468 FANCIQ9NVI1 1328 aa26.15■■□□□ 1.78
SIGMAR1-202ENST00000353468 TSR2Q969E8 191 aaKnown RBP26.15■■□□□ 1.78
SIGMAR1-202ENST00000353468 DCAF5Q96JK2 942 aa26.15■■□□□ 1.78
SIGMAR1-202ENST00000353468 SHANK3Q9BYB0 1731 aa26.15■■□□□ 1.78
SIGMAR1-202ENST00000353468 DDB1Q16531 1140 aa26.14■■□□□ 1.78
SIGMAR1-202ENST00000353468 QTRT2Q9H974 415 aaKnown RBP26.14■■□□□ 1.78
SIGMAR1-202ENST00000353468 LRRC37A3O60309 1634 aa26.14■■□□□ 1.77
SIGMAR1-202ENST00000353468 CHL1O00533 1208 aa26.13■■□□□ 1.77
SIGMAR1-202ENST00000353468 NKX1-1Q15270 411 aaPredicted RBP26.13■■□□□ 1.77
SIGMAR1-202ENST00000353468 KDM6AO15550 1401 aaPredicted RBP26.13■■□□□ 1.77
SIGMAR1-202ENST00000353468 TNS2Q63HR2 1409 aa26.13■■□□□ 1.77
SIGMAR1-202ENST00000353468 TEFQ10587 303 aa26.12■■□□□ 1.77
SIGMAR1-202ENST00000353468 TAF7Q15545 349 aaPredicted RBP26.12■■□□□ 1.77
SIGMAR1-202ENST00000353468 MBIPQ9NS73 344 aa26.12■■□□□ 1.77
SIGMAR1-202ENST00000353468 ADAMTS7Q9UKP4 1686 aa26.12■■□□□ 1.77
SIGMAR1-202ENST00000353468 VIRMAQ69YN4 1812 aaKnown RBP26.12■■□□□ 1.77
SIGMAR1-202ENST00000353468 SCN11AQ9UI33 1791 aa26.1■■□□□ 1.77
SIGMAR1-202ENST00000353468 ZNF772Q68DY9 489 aaPredicted RBP26.1■■□□□ 1.77
SIGMAR1-202ENST00000353468 BABAM1Q9NWV8 329 aa26.1■■□□□ 1.77
SIGMAR1-202ENST00000353468 GLI3P10071 1580 aa26.1■■□□□ 1.77
SIGMAR1-202ENST00000353468 MIS18AQ9NYP9 233 aa26.09■■□□□ 1.77
SIGMAR1-202ENST00000353468 TSPYL4Q9UJ04 414 aa26.08■■□□□ 1.77
SIGMAR1-202ENST00000353468 EXOSC9Q06265 439 aaKnown RBP26.07■■□□□ 1.76
SIGMAR1-202ENST00000353468 SLC52A2Q9HAB3 445 aa26.07■■□□□ 1.76
SIGMAR1-202ENST00000353468 A0A0G2JS52 829 aa26.06■■□□□ 1.76
SIGMAR1-202ENST00000353468 MYT1Q01538 1121 aa26.06■■□□□ 1.76
SIGMAR1-202ENST00000353468 ERVV-2B6SEH9 535 aa26.05■■□□□ 1.76
SIGMAR1-202ENST00000353468 ONECUT3O60422 494 aaPredicted RBP26.05■■□□□ 1.76
SIGMAR1-202ENST00000353468 BTBD11A6QL63 1104 aa26.04■■□□□ 1.76
SIGMAR1-202ENST00000353468 CABP4P57796 275 aa26.04■■□□□ 1.76
SIGMAR1-202ENST00000353468 NFATC2IPQ8NCF5 419 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms