RNA–Protein interactions for RNA: ENST00000348386.7

CAST-205, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-205ENST00000348386 MARF1Q9Y4F3 1742 aaKnown RBP10.24□□□□□ -0.77
CAST-205ENST00000348386 SMG6Q86US8 1419 aaKnown RBP10.24□□□□□ -0.77
CAST-205ENST00000348386 RIOK3O14730 519 aaKnown RBP10.24□□□□□ -0.77
CAST-205ENST00000348386 EVA1CP58658 441 aa10.24□□□□□ -0.77
CAST-205ENST00000348386 BTG4Q9NY30 223 aa10.24□□□□□ -0.77
CAST-205ENST00000348386 CDK12Q9NYV4 1490 aaPredicted RBP10.24□□□□□ -0.77
CAST-205ENST00000348386 MEX3CQ5U5Q3 659 aaKnown RBP10.23□□□□□ -0.77
CAST-205ENST00000348386 FOXD4L5Q5VV16 416 aaPredicted RBP10.23□□□□□ -0.77
CAST-205ENST00000348386 FOXD4L4Q8WXT5 416 aaPredicted RBP10.23□□□□□ -0.77
CAST-205ENST00000348386 C8orf37Q96NL8 207 aa10.23□□□□□ -0.77
CAST-205ENST00000348386 EYA1Q99502 592 aa10.23□□□□□ -0.77
CAST-205ENST00000348386 NLRP2Q9NX02 1062 aa10.23□□□□□ -0.77
CAST-205ENST00000348386 MTMR7Q9Y216 660 aa10.23□□□□□ -0.77
CAST-205ENST00000348386 SALL2Q9Y467 1007 aaPredicted RBP10.23□□□□□ -0.77
CAST-205ENST00000348386 INSRP06213 1382 aa10.23□□□□□ -0.77
CAST-205ENST00000348386 SULT6B1Q6IMI4 303 aa10.23□□□□□ -0.77
CAST-205ENST00000348386 RTL1A6NKG5 1358 aa10.23□□□□□ -0.77
CAST-205ENST00000348386 CPDO75976 1380 aa10.23□□□□□ -0.77
CAST-205ENST00000348386 MAP2P11137 1827 aaKnown RBP10.23□□□□□ -0.77
CAST-205ENST00000348386 PEAK1Q9H792 1746 aa10.22□□□□□ -0.77
CAST-205ENST00000348386 NBPF6Q5VWK0 638 aa10.22□□□□□ -0.77
CAST-205ENST00000348386 AEBP1Q8IUX7 1158 aa10.22□□□□□ -0.77
CAST-205ENST00000348386 NGLY1Q96IV0 654 aa10.22□□□□□ -0.77
CAST-205ENST00000348386 NBPF4Q96M43 638 aa10.22□□□□□ -0.77
CAST-205ENST00000348386 COL3A1P02461 1466 aaPredicted RBP10.22□□□□□ -0.77
CAST-205ENST00000348386 KIF24Q5T7B8 1368 aa10.22□□□□□ -0.77
CAST-205ENST00000348386 USP35Q9P2H5 1018 aa10.22□□□□□ -0.77
CAST-205ENST00000348386 PHRF1Q9P1Y6 1649 aaKnown RBP10.21□□□□□ -0.77
CAST-205ENST00000348386 USP54Q70EL1 1684 aa10.21□□□□□ -0.77
CAST-205ENST00000348386 HNRNPUQ00839 825 aaKnown RBP eCLIP10.21□□□□□ -0.77
CAST-205ENST00000348386 TOM1L2Q6ZVM7 507 aa10.21□□□□□ -0.77
CAST-205ENST00000348386 RGS22Q8NE09 1264 aa10.21□□□□□ -0.77
CAST-205ENST00000348386 BCL11BQ9C0K0 894 aaPredicted RBP10.21□□□□□ -0.77
CAST-205ENST00000348386 ERBB3P21860 1342 aa10.21□□□□□ -0.78
CAST-205ENST00000348386 SPATA31A6Q5VVP1 1343 aa10.21□□□□□ -0.78
CAST-205ENST00000348386 PRKAR2BP31323 418 aa10.21□□□□□ -0.78
CAST-205ENST00000348386 KDM4CQ9H3R0 1056 aa10.21□□□□□ -0.78
CAST-205ENST00000348386 LARP1Q6PKG0 1096 aaKnown RBP10.2□□□□□ -0.78
CAST-205ENST00000348386 BLMP54132 1417 aaPredicted RBP10.19□□□□□ -0.78
CAST-205ENST00000348386 RRP7AQ9Y3A4 280 aaKnown RBP10.19□□□□□ -0.78
CAST-205ENST00000348386 APAF1O14727 1248 aa10.19□□□□□ -0.78
CAST-205ENST00000348386 FCHSD2O94868 740 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 STK24Q9Y6E0 443 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 CAMTA1Q9Y6Y1 1673 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 LTN1O94822 1766 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 LRP6O75581 1613 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 COL22A1Q8NFW1 1626 aaPredicted RBP10.18□□□□□ -0.78
CAST-205ENST00000348386 CRYBG1Q9Y4K1 1723 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 TESPA1A2RU30 521 aaPredicted RBP10.18□□□□□ -0.78
CAST-205ENST00000348386 NEFMP07197 916 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 CLUAP1Q96AJ1 413 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 RUNDC1Q96C34 613 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 PHACTR3Q96KR7 559 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 WDR17Q8IZU2 1322 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 IGSF1Q8N6C5 1336 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 MAPK8IP3Q9UPT6 1336 aa10.18□□□□□ -0.78
CAST-205ENST00000348386 SPINK5Q9NQ38 1064 aaPredicted RBP10.17□□□□□ -0.78
CAST-205ENST00000348386 TCP11L2Q8N4U5 519 aa10.17□□□□□ -0.78
CAST-205ENST00000348386 ABCA3Q99758 1704 aa10.17□□□□□ -0.78
CAST-205ENST00000348386 PLEKHF1Q96S99 279 aa10.16□□□□□ -0.78
CAST-205ENST00000348386 PNNQ9H307 717 aaKnown RBP10.16□□□□□ -0.78
CAST-205ENST00000348386 USP21Q9UK80 565 aa10.16□□□□□ -0.78
CAST-205ENST00000348386 COL5A2P05997 1499 aaPredicted RBP10.16□□□□□ -0.78
CAST-205ENST00000348386 SHPRHQ149N8 1683 aa10.16□□□□□ -0.78
CAST-205ENST00000348386 RAPGEF4Q8WZA2 1011 aa10.16□□□□□ -0.78
CAST-205ENST00000348386 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.15□□□□□ -0.78
CAST-205ENST00000348386 UNC5CLQ8IV45 518 aa10.15□□□□□ -0.78
CAST-205ENST00000348386 ZFP91Q96JP5 570 aaPredicted RBP10.15□□□□□ -0.78
CAST-205ENST00000348386 AFF2P51816 1311 aa10.15□□□□□ -0.78
CAST-205ENST00000348386 TATP17735 454 aaPredicted RBP10.14□□□□□ -0.79
CAST-205ENST00000348386 CARD10Q9BWT7 1032 aa10.14□□□□□ -0.79
CAST-205ENST00000348386 COL18A1P39060 1754 aa10.14□□□□□ -0.79
CAST-205ENST00000348386 RBM25P49756 843 aaKnown RBP10.13□□□□□ -0.79
CAST-205ENST00000348386 RIPK4P57078 832 aa10.13□□□□□ -0.79
CAST-205ENST00000348386 MTHFSDQ2M296 383 aaKnown RBP10.13□□□□□ -0.79
CAST-205ENST00000348386 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
CAST-205ENST00000348386 RGPD5Q99666 1765 aa10.13□□□□□ -0.79
CAST-205ENST00000348386 TMPOP42166 694 aaKnown RBP10.13□□□□□ -0.79
CAST-205ENST00000348386 ILDR1Q86SU0 546 aaPredicted RBP10.13□□□□□ -0.79
CAST-205ENST00000348386 FAM117AQ9C073 453 aa10.13□□□□□ -0.79
CAST-205ENST00000348386 CRB1P82279 1406 aa10.12□□□□□ -0.79
CAST-205ENST00000348386 KDRP35968 1356 aa10.12□□□□□ -0.79
CAST-205ENST00000348386 A0A0G2JS52 829 aa10.12□□□□□ -0.79
CAST-205ENST00000348386 SLIT2O94813 1529 aa10.12□□□□□ -0.79
CAST-205ENST00000348386 COL14A1Q05707 1796 aaKnown RBP10.12□□□□□ -0.79
CAST-205ENST00000348386 LMO7Q8WWI1 1683 aa10.12□□□□□ -0.79
CAST-205ENST00000348386 IL2RBP14784 551 aa10.12□□□□□ -0.79
CAST-205ENST00000348386 NFE2L2Q16236 605 aa10.12□□□□□ -0.79
CAST-205ENST00000348386 PLEKHO1Q53GL0 409 aaPredicted RBP10.12□□□□□ -0.79
CAST-205ENST00000348386 BARGINQ6ZT62 677 aa10.12□□□□□ -0.79
CAST-205ENST00000348386 BCL9LQ86UU0 1499 aa10.12□□□□□ -0.79
CAST-205ENST00000348386 ABCC6O95255 1503 aa10.11□□□□□ -0.79
CAST-205ENST00000348386 DCTN1Q14203 1278 aa10.11□□□□□ -0.79
CAST-205ENST00000348386 ZNF530Q6P9A1 599 aaPredicted RBP10.11□□□□□ -0.79
CAST-205ENST00000348386 SPATA31A1Q5TZJ5 1347 aa10.11□□□□□ -0.79
CAST-205ENST00000348386 FAM98CQ17RN3 349 aaKnown RBP10.1□□□□□ -0.79
CAST-205ENST00000348386 DDX54Q8TDD1 881 aaKnown RBP10.1□□□□□ -0.79
CAST-205ENST00000348386 THUMPD2Q9BTF0 503 aaKnown RBP10.1□□□□□ -0.79
CAST-205ENST00000348386 QTRT2Q9H974 415 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms