RNA–Protein interactions for RNA: ENST00000348124.5

TRAF6-201, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 2,558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-201ENST00000348124 HMOX1P09601 288 aa18.72■□□□□ 0.59
TRAF6-201ENST00000348124 MYRIPQ8NFW9 859 aa18.72■□□□□ 0.59
TRAF6-201ENST00000348124 SMARCA5O60264 1052 aaPredicted RBP18.71■□□□□ 0.59
TRAF6-201ENST00000348124 C8orf58Q8NAV2 365 aa18.71■□□□□ 0.59
TRAF6-201ENST00000348124 NEO1Q92859 1461 aa18.71■□□□□ 0.59
TRAF6-201ENST00000348124 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
TRAF6-201ENST00000348124 JARID2Q92833 1246 aaPredicted RBP18.7■□□□□ 0.58
TRAF6-201ENST00000348124 KNDC1Q76NI1 1749 aa18.7■□□□□ 0.58
TRAF6-201ENST00000348124 ERC2O15083 957 aa18.7■□□□□ 0.58
TRAF6-201ENST00000348124 ZNF853P0CG23 659 aa18.7■□□□□ 0.58
TRAF6-201ENST00000348124 FBLN1P23142 703 aa18.7■□□□□ 0.58
TRAF6-201ENST00000348124 GGT6Q6P531 493 aa18.7■□□□□ 0.58
TRAF6-201ENST00000348124 ANKRD44Q8N8A2 993 aa18.7■□□□□ 0.58
TRAF6-201ENST00000348124 TMX3Q96JJ7 454 aa18.7■□□□□ 0.58
TRAF6-201ENST00000348124 VGFO15240 615 aaPredicted RBP18.69■□□□□ 0.58
TRAF6-201ENST00000348124 NEK4P51957 841 aa18.69■□□□□ 0.58
TRAF6-201ENST00000348124 MPNDQ8N594 471 aa18.69■□□□□ 0.58
TRAF6-201ENST00000348124 DIP2BQ9P265 1576 aa18.69■□□□□ 0.58
TRAF6-201ENST00000348124 BRD1O95696 1058 aa18.69■□□□□ 0.58
TRAF6-201ENST00000348124 PODXL2Q9NZ53 605 aa18.69■□□□□ 0.58
TRAF6-201ENST00000348124 ZHX1Q9UKY1 873 aaPredicted RBP18.69■□□□□ 0.58
TRAF6-201ENST00000348124 CAMSAP1Q5T5Y3 1602 aa18.68■□□□□ 0.58
TRAF6-201ENST00000348124 MINK1Q8N4C8 1332 aaPredicted RBP18.68■□□□□ 0.58
TRAF6-201ENST00000348124 TSC1Q92574 1164 aa18.68■□□□□ 0.58
TRAF6-201ENST00000348124 SYAP1Q96A49 352 aaPredicted RBP18.68■□□□□ 0.58
TRAF6-201ENST00000348124 KIF24Q5T7B8 1368 aa18.68■□□□□ 0.58
TRAF6-201ENST00000348124 ZFYVE9O95405 1425 aa18.67■□□□□ 0.58
TRAF6-201ENST00000348124 TSPOAP1O95153 1857 aa18.67■□□□□ 0.58
TRAF6-201ENST00000348124 CD163L1Q9NR16 1453 aa18.67■□□□□ 0.58
TRAF6-201ENST00000348124 ANKRD26Q9UPS8 1709 aa18.67■□□□□ 0.58
TRAF6-201ENST00000348124 HDGFL2Q7Z4V5 671 aaPredicted RBP18.67■□□□□ 0.58
TRAF6-201ENST00000348124 ZNF830Q96NB3 372 aaPredicted RBP18.67■□□□□ 0.58
TRAF6-201ENST00000348124 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
TRAF6-201ENST00000348124 CEP85Q6P2H3 762 aa18.66■□□□□ 0.58
TRAF6-201ENST00000348124 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
TRAF6-201ENST00000348124 ATP10DQ9P241 1426 aa18.66■□□□□ 0.58
TRAF6-201ENST00000348124 YEATS2Q9ULM3 1422 aa18.66■□□□□ 0.58
TRAF6-201ENST00000348124 DMTNQ08495 405 aa18.65■□□□□ 0.58
TRAF6-201ENST00000348124 RPAP2Q8IXW5 612 aaPredicted RBP18.65■□□□□ 0.58
TRAF6-201ENST00000348124 ZNF710Q8N1W2 664 aa18.65■□□□□ 0.58
TRAF6-201ENST00000348124 PRIMPOLQ96LW4 560 aa18.65■□□□□ 0.58
TRAF6-201ENST00000348124 KIDINS220Q9ULH0 1771 aa18.65■□□□□ 0.58
TRAF6-201ENST00000348124 FOXD4L6Q3SYB3 417 aaPredicted RBP18.65■□□□□ 0.58
TRAF6-201ENST00000348124 FOXD4L3Q6VB84 417 aaPredicted RBP18.65■□□□□ 0.58
TRAF6-201ENST00000348124 PIBF1Q8WXW3 757 aa18.65■□□□□ 0.58
TRAF6-201ENST00000348124 PHF14O94880 888 aa18.64■□□□□ 0.57
TRAF6-201ENST00000348124 NOLC1Q14978 699 aaKnown RBP eCLIP18.64■□□□□ 0.57
TRAF6-201ENST00000348124 UTP14CQ5TAP6 766 aaKnown RBP18.64■□□□□ 0.57
TRAF6-201ENST00000348124 NOL8Q76FK4 1167 aaKnown RBP18.64■□□□□ 0.57
TRAF6-201ENST00000348124 GADD45BO75293 160 aaPredicted RBP18.63■□□□□ 0.57
TRAF6-201ENST00000348124 ZSCAN20P17040 1043 aaPredicted RBP18.63■□□□□ 0.57
TRAF6-201ENST00000348124 HMGN5P82970 282 aaKnown RBP18.63■□□□□ 0.57
TRAF6-201ENST00000348124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.63■□□□□ 0.57
TRAF6-201ENST00000348124 GDPD2Q9HCC8 539 aa18.63■□□□□ 0.57
TRAF6-201ENST00000348124 MLH3Q9UHC1 1453 aa18.63■□□□□ 0.57
TRAF6-201ENST00000348124 MCM2P49736 904 aa18.63■□□□□ 0.57
TRAF6-201ENST00000348124 CUL4AQ13619 759 aa18.62■□□□□ 0.57
TRAF6-201ENST00000348124 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
TRAF6-201ENST00000348124 USP25Q9UHP3 1055 aa18.62■□□□□ 0.57
TRAF6-201ENST00000348124 PRAM1Q96QH2 718 aa18.62■□□□□ 0.57
TRAF6-201ENST00000348124 CABP1Q9NZU7 370 aa18.62■□□□□ 0.57
TRAF6-201ENST00000348124 TTC12Q9H892 705 aaPredicted RBP18.61■□□□□ 0.57
TRAF6-201ENST00000348124 FAM83GA6ND36 823 aa18.61■□□□□ 0.57
TRAF6-201ENST00000348124 UVSSAQ2YD98 709 aa18.61■□□□□ 0.57
TRAF6-201ENST00000348124 FAM184AQ8NB25 1140 aa18.61■□□□□ 0.57
TRAF6-201ENST00000348124 FAM177BA6PVY3 158 aa18.6■□□□□ 0.57
TRAF6-201ENST00000348124 GTF2F1P35269 517 aaKnown RBP eCLIP18.6■□□□□ 0.57
TRAF6-201ENST00000348124 CBX1P83916 185 aa18.6■□□□□ 0.57
TRAF6-201ENST00000348124 LMOD3Q0VAK6 560 aa18.6■□□□□ 0.57
TRAF6-201ENST00000348124 USP48Q86UV5 1035 aa18.6■□□□□ 0.57
TRAF6-201ENST00000348124 ABCC3O15438 1527 aa18.6■□□□□ 0.57
TRAF6-201ENST00000348124 NEXMIFQ5QGS0 1516 aa18.6■□□□□ 0.57
TRAF6-201ENST00000348124 RTL1A6NKG5 1358 aa18.6■□□□□ 0.57
TRAF6-201ENST00000348124 ADCY5O95622 1261 aa18.59■□□□□ 0.57
TRAF6-201ENST00000348124 TRHP20396 242 aaPredicted RBP18.59■□□□□ 0.57
TRAF6-201ENST00000348124 DCTN1Q14203 1278 aa18.59■□□□□ 0.57
TRAF6-201ENST00000348124 KRT24Q2M2I5 525 aa18.59■□□□□ 0.57
TRAF6-201ENST00000348124 INTS4Q96HW7 963 aaKnown RBP18.59■□□□□ 0.57
TRAF6-201ENST00000348124 MEIS3Q99687 375 aa18.59■□□□□ 0.57
TRAF6-201ENST00000348124 PALD1Q9ULE6 856 aa18.59■□□□□ 0.57
TRAF6-201ENST00000348124 MSH6P52701 1360 aa18.59■□□□□ 0.57
TRAF6-201ENST00000348124 PDE1AP54750 535 aa18.58■□□□□ 0.57
TRAF6-201ENST00000348124 KIF3AQ9Y496 699 aa18.58■□□□□ 0.57
TRAF6-201ENST00000348124 HECW2Q9P2P5 1572 aa18.58■□□□□ 0.57
TRAF6-201ENST00000348124 IL13P35225 146 aa18.58■□□□□ 0.56
TRAF6-201ENST00000348124 PPP4R3BQ5MIZ7 849 aa18.58■□□□□ 0.56
TRAF6-201ENST00000348124 CDK19Q9BWU1 502 aa18.58■□□□□ 0.56
TRAF6-201ENST00000348124 EMILIN1Q9Y6C2 1016 aa18.58■□□□□ 0.56
TRAF6-201ENST00000348124 RIMS2Q9UQ26 1411 aa18.58■□□□□ 0.56
TRAF6-201ENST00000348124 ARHGEF40Q8TER5 1519 aa18.57■□□□□ 0.56
TRAF6-201ENST00000348124 MCCP23508 829 aa18.57■□□□□ 0.56
TRAF6-201ENST00000348124 ESYT1Q9BSJ8 1104 aa18.57■□□□□ 0.56
TRAF6-201ENST00000348124 RGS12O14924 1447 aa18.57■□□□□ 0.56
TRAF6-201ENST00000348124 SPTLC3Q9NUV7 552 aa18.56■□□□□ 0.56
TRAF6-201ENST00000348124 YTHDC2Q9H6S0 1430 aaKnown RBP18.56■□□□□ 0.56
TRAF6-201ENST00000348124 PTPRMP28827 1452 aa18.56■□□□□ 0.56
TRAF6-201ENST00000348124 FKBP5Q13451 457 aaPredicted RBP18.56■□□□□ 0.56
TRAF6-201ENST00000348124 ATP2B3Q16720 1220 aa18.56■□□□□ 0.56
TRAF6-201ENST00000348124 TSHZ3Q63HK5 1081 aa18.56■□□□□ 0.56
TRAF6-201ENST00000348124 OSBPL3Q9H4L5 887 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms