RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
SMARCC2-202ENST00000347471 ZNF853P0CG23 659 aa21.7■■□□□ 1.06
SMARCC2-202ENST00000347471 KCNH5Q8NCM2 988 aa21.7■■□□□ 1.06
SMARCC2-202ENST00000347471 ZNF530Q6P9A1 599 aaPredicted RBP21.69■■□□□ 1.06
SMARCC2-202ENST00000347471 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
SMARCC2-202ENST00000347471 IP6K1Q92551 441 aa21.68■■□□□ 1.06
SMARCC2-202ENST00000347471 IPO9Q96P70 1041 aaKnown RBP21.68■■□□□ 1.06
SMARCC2-202ENST00000347471 ANP32EQ9BTT0 268 aa21.68■■□□□ 1.06
SMARCC2-202ENST00000347471 STK31Q9BXU1 1019 aa21.68■■□□□ 1.06
SMARCC2-202ENST00000347471 IGSF1Q8N6C5 1336 aa21.68■■□□□ 1.06
SMARCC2-202ENST00000347471 ANKRD24Q8TF21 1146 aa21.67■■□□□ 1.06
SMARCC2-202ENST00000347471 MON2Q7Z3U7 1717 aa21.67■■□□□ 1.06
SMARCC2-202ENST00000347471 CHL1O00533 1208 aa21.67■■□□□ 1.06
SMARCC2-202ENST00000347471 TEFQ10587 303 aa21.67■■□□□ 1.06
SMARCC2-202ENST00000347471 ANKRD45Q5TZF3 282 aa21.66■■□□□ 1.06
SMARCC2-202ENST00000347471 API5Q9BZZ5 524 aaKnown RBP21.66■■□□□ 1.06
SMARCC2-202ENST00000347471 LGR6Q9HBX8 967 aa21.66■■□□□ 1.06
SMARCC2-202ENST00000347471 FKBP5Q13451 457 aaPredicted RBP21.65■■□□□ 1.06
SMARCC2-202ENST00000347471 G2E3Q7L622 706 aa21.65■■□□□ 1.06
SMARCC2-202ENST00000347471 IL17REQ8NFR9 667 aa21.65■■□□□ 1.06
SMARCC2-202ENST00000347471 AXIN2Q9Y2T1 843 aa21.64■■□□□ 1.06
SMARCC2-202ENST00000347471 ARHGEF10O15013 1369 aa21.64■■□□□ 1.05
SMARCC2-202ENST00000347471 C1orf141Q5JVX7 400 aa21.64■■□□□ 1.05
SMARCC2-202ENST00000347471 ZBTB40Q9NUA8 1239 aa21.63■■□□□ 1.05
SMARCC2-202ENST00000347471 ANXA1P04083 346 aa21.62■■□□□ 1.05
SMARCC2-202ENST00000347471 C8orf34Q49A92 452 aa21.62■■□□□ 1.05
SMARCC2-202ENST00000347471 AKAP12Q02952 1782 aa21.62■■□□□ 1.05
SMARCC2-202ENST00000347471 CADPS2Q86UW7 1296 aa21.6■■□□□ 1.05
SMARCC2-202ENST00000347471 USP35Q9P2H5 1018 aa21.6■■□□□ 1.05
SMARCC2-202ENST00000347471 TAF7Q15545 349 aaPredicted RBP21.59■■□□□ 1.05
SMARCC2-202ENST00000347471 XRN1Q8IZH2 1706 aaKnown RBP21.59■■□□□ 1.05
SMARCC2-202ENST00000347471 ZNF335Q9H4Z2 1342 aaPredicted RBP21.59■■□□□ 1.05
SMARCC2-202ENST00000347471 ADAMTSL3P82987 1691 aa21.59■■□□□ 1.05
SMARCC2-202ENST00000347471 SEC24BO95487 1268 aa21.59■■□□□ 1.05
SMARCC2-202ENST00000347471 KCNQ3O43525 872 aa21.58■■□□□ 1.05
SMARCC2-202ENST00000347471 HDGFL1Q5TGJ6 251 aa21.58■■□□□ 1.05
SMARCC2-202ENST00000347471 ARHGEF25Q86VW2 580 aa21.58■■□□□ 1.05
SMARCC2-202ENST00000347471 RAPGEF4Q8WZA2 1011 aa21.58■■□□□ 1.05
SMARCC2-202ENST00000347471 ZBTB7BO15156 539 aaPredicted RBP21.58■■□□□ 1.05
SMARCC2-202ENST00000347471 PLEKHO1Q53GL0 409 aaPredicted RBP21.58■■□□□ 1.05
SMARCC2-202ENST00000347471 PEAK1Q9H792 1746 aa21.57■■□□□ 1.04
SMARCC2-202ENST00000347471 MFAP1P55081 439 aaKnown RBP21.57■■□□□ 1.04
SMARCC2-202ENST00000347471 MEIS3Q99687 375 aa21.56■■□□□ 1.04
SMARCC2-202ENST00000347471 AAMPQ13685 434 aa21.56■■□□□ 1.04
SMARCC2-202ENST00000347471 UPF2Q9HAU5 1272 aaKnown RBP21.56■■□□□ 1.04
SMARCC2-202ENST00000347471 MAP3K5Q99683 1374 aa21.56■■□□□ 1.04
SMARCC2-202ENST00000347471 MSH6P52701 1360 aa21.55■■□□□ 1.04
SMARCC2-202ENST00000347471 BTBD11A6QL63 1104 aa21.55■■□□□ 1.04
SMARCC2-202ENST00000347471 STRN4Q9NRL3 753 aa21.54■■□□□ 1.04
SMARCC2-202ENST00000347471 PIK3C2AO00443 1686 aa21.54■■□□□ 1.04
SMARCC2-202ENST00000347471 C1orf167Q5SNV9 1468 aa21.54■■□□□ 1.04
SMARCC2-202ENST00000347471 TOPAZ1Q8N9V7 1692 aa21.54■■□□□ 1.04
SMARCC2-202ENST00000347471 KDM4FA0A1W2PPD8 638 aa21.54■■□□□ 1.04
SMARCC2-202ENST00000347471 CHMP4BQ9H444 224 aaKnown RBP21.54■■□□□ 1.04
SMARCC2-202ENST00000347471 CCDC30Q5VVM6 783 aa21.53■■□□□ 1.04
SMARCC2-202ENST00000347471 PRDM11Q9NQV5 511 aa21.53■■□□□ 1.04
SMARCC2-202ENST00000347471 NALCNQ8IZF0 1738 aa21.53■■□□□ 1.04
SMARCC2-202ENST00000347471 ARHGAP45Q92619 1136 aa21.53■■□□□ 1.04
SMARCC2-202ENST00000347471 NPHP3Q7Z494 1330 aa21.52■■□□□ 1.04
SMARCC2-202ENST00000347471 A0A0G2JS52 829 aa21.52■■□□□ 1.04
SMARCC2-202ENST00000347471 KDRP35968 1356 aa21.52■■□□□ 1.03
SMARCC2-202ENST00000347471 FLIIQ13045 1269 aa21.51■■□□□ 1.03
SMARCC2-202ENST00000347471 SLC39A6Q13433 755 aa21.51■■□□□ 1.03
SMARCC2-202ENST00000347471 PHAXQ9H814 394 aaKnown RBP21.51■■□□□ 1.03
SMARCC2-202ENST00000347471 NRKQ7Z2Y5 1582 aa21.51■■□□□ 1.03
SMARCC2-202ENST00000347471 HDAC1Q13547 482 aaPredicted RBP21.5■■□□□ 1.03
SMARCC2-202ENST00000347471 AIMP1Q12904 312 aaKnown RBP21.5■■□□□ 1.03
SMARCC2-202ENST00000347471 SPRYD3Q8NCJ5 442 aa21.5■■□□□ 1.03
SMARCC2-202ENST00000347471 CRB1P82279 1406 aa21.5■■□□□ 1.03
SMARCC2-202ENST00000347471 CHD1LQ86WJ1 897 aa21.5■■□□□ 1.03
SMARCC2-202ENST00000347471 SMARCA5O60264 1052 aaPredicted RBP21.49■■□□□ 1.03
SMARCC2-202ENST00000347471 ABCC4O15439 1325 aa21.49■■□□□ 1.03
SMARCC2-202ENST00000347471 FMN2Q9NZ56 1722 aa21.48■■□□□ 1.03
SMARCC2-202ENST00000347471 CHD2O14647 1828 aaKnown RBP21.48■■□□□ 1.03
SMARCC2-202ENST00000347471 SIRT2Q8IXJ6 389 aa21.47■■□□□ 1.03
SMARCC2-202ENST00000347471 TOM1L2Q6ZVM7 507 aa21.47■■□□□ 1.03
SMARCC2-202ENST00000347471 TATP17735 454 aaPredicted RBP21.47■■□□□ 1.03
SMARCC2-202ENST00000347471 DDRGK1Q96HY6 314 aa21.47■■□□□ 1.03
SMARCC2-202ENST00000347471 PIP4K2AP48426 406 aaPredicted RBP21.46■■□□□ 1.03
SMARCC2-202ENST00000347471 CHPF2Q9P2E5 772 aa21.46■■□□□ 1.03
SMARCC2-202ENST00000347471 PRAMEF22A3QJZ6 481 aa21.46■■□□□ 1.03
SMARCC2-202ENST00000347471 SMC5Q8IY18 1101 aa21.46■■□□□ 1.03
SMARCC2-202ENST00000347471 SLAIN2Q9P270 581 aa21.46■■□□□ 1.03
SMARCC2-202ENST00000347471 BRINP3Q76B58 766 aa21.45■■□□□ 1.02
SMARCC2-202ENST00000347471 AKAP4Q5JQC9 854 aa21.45■■□□□ 1.02
SMARCC2-202ENST00000347471 C16orf71Q8IYS4 520 aaPredicted RBP21.45■■□□□ 1.02
SMARCC2-202ENST00000347471 USP19O94966 1318 aa21.45■■□□□ 1.02
SMARCC2-202ENST00000347471 HTATSF1O43719 755 aaKnown RBP21.44■■□□□ 1.02
SMARCC2-202ENST00000347471 EVA1CP58658 441 aa21.44■■□□□ 1.02
SMARCC2-202ENST00000347471 ERBB3P21860 1342 aa21.44■■□□□ 1.02
SMARCC2-202ENST00000347471 AMOTQ4VCS5 1084 aa21.44■■□□□ 1.02
SMARCC2-202ENST00000347471 EXOC6BQ9Y2D4 811 aa21.44■■□□□ 1.02
SMARCC2-202ENST00000347471 BRPF1P55201 1214 aaPredicted RBP21.43■■□□□ 1.02
SMARCC2-202ENST00000347471 DDX54Q8TDD1 881 aaKnown RBP21.43■■□□□ 1.02
SMARCC2-202ENST00000347471 DLG5Q8TDM6 1919 aa21.43■■□□□ 1.02
SMARCC2-202ENST00000347471 RNMTO43148 476 aaKnown RBP21.43■■□□□ 1.02
SMARCC2-202ENST00000347471 KIAA0232Q92628 1395 aa21.43■■□□□ 1.02
SMARCC2-202ENST00000347471 RTL5Q5HYW3 569 aaPredicted RBP21.42■■□□□ 1.02
SMARCC2-202ENST00000347471 PTPRCP08575 1304 aa21.42■■□□□ 1.02
SMARCC2-202ENST00000347471 RTL1A6NKG5 1358 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms