RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 PTPRUQ92729 1446 aa26.33■■□□□ 1.81
TRIM3-201ENST00000345851 CCDC61Q9Y6R9 512 aa26.32■■□□□ 1.8
TRIM3-201ENST00000345851 RBM33Q96EV2 1170 aaKnown RBP26.32■■□□□ 1.8
TRIM3-201ENST00000345851 NUCB2P80303 420 aa26.32■■□□□ 1.8
TRIM3-201ENST00000345851 PLEKHG1Q9ULL1 1385 aa26.31■■□□□ 1.8
TRIM3-201ENST00000345851 ADGRB2O60241 1585 aa26.31■■□□□ 1.8
TRIM3-201ENST00000345851 CDC45O75419 566 aa26.31■■□□□ 1.8
TRIM3-201ENST00000345851 PLEKHF1Q96S99 279 aa26.31■■□□□ 1.8
TRIM3-201ENST00000345851 THEMISQ8N1K5 641 aaPredicted RBP26.3■■□□□ 1.8
TRIM3-201ENST00000345851 RNF214Q8ND24 703 aa26.3■■□□□ 1.8
TRIM3-201ENST00000345851 GPT2Q8TD30 523 aa26.3■■□□□ 1.8
TRIM3-201ENST00000345851 EMILIN1Q9Y6C2 1016 aa26.3■■□□□ 1.8
TRIM3-201ENST00000345851 FOXD4L5Q5VV16 416 aaPredicted RBP26.29■■□□□ 1.8
TRIM3-201ENST00000345851 FOXD4L4Q8WXT5 416 aaPredicted RBP26.29■■□□□ 1.8
TRIM3-201ENST00000345851 GCC1Q96CN9 775 aa26.29■■□□□ 1.8
TRIM3-201ENST00000345851 SYCE3A1L190 88 aa26.29■■□□□ 1.8
TRIM3-201ENST00000345851 ZGPATQ8N5A5 531 aaKnown RBP26.29■■□□□ 1.8
TRIM3-201ENST00000345851 SOX12O15370 315 aa26.28■■□□□ 1.8
TRIM3-201ENST00000345851 NCBP3Q53F19 620 aaKnown RBP26.28■■□□□ 1.8
TRIM3-201ENST00000345851 RRS1Q15050 365 aaKnown RBP26.28■■□□□ 1.8
TRIM3-201ENST00000345851 DYNC1I1O14576 645 aa26.27■■□□□ 1.8
TRIM3-201ENST00000345851 RABEP1Q15276 862 aa26.27■■□□□ 1.8
TRIM3-201ENST00000345851 ZBTB7BO15156 539 aaPredicted RBP26.27■■□□□ 1.8
TRIM3-201ENST00000345851 POLKQ9UBT6 870 aa26.27■■□□□ 1.8
TRIM3-201ENST00000345851 GSPT1P15170 499 aaKnown RBP26.26■■□□□ 1.79
TRIM3-201ENST00000345851 FAM135BQ49AJ0 1406 aa26.26■■□□□ 1.79
TRIM3-201ENST00000345851 CYP2E1P05181 493 aaPredicted RBP26.26■■□□□ 1.79
TRIM3-201ENST00000345851 CSPP1Q1MSJ5 1256 aa26.26■■□□□ 1.79
TRIM3-201ENST00000345851 TMEM63CQ9P1W3 806 aa26.26■■□□□ 1.79
TRIM3-201ENST00000345851 ZHX1Q9UKY1 873 aaPredicted RBP26.26■■□□□ 1.79
TRIM3-201ENST00000345851 SIRT2Q8IXJ6 389 aa26.25■■□□□ 1.79
TRIM3-201ENST00000345851 NSFL1CQ9UNZ2 370 aaKnown RBP26.25■■□□□ 1.79
TRIM3-201ENST00000345851 TECPR2O15040 1411 aa26.25■■□□□ 1.79
TRIM3-201ENST00000345851 DIAPH1O60610 1272 aaKnown RBP26.24■■□□□ 1.79
TRIM3-201ENST00000345851 SASS6Q6UVJ0 657 aa26.24■■□□□ 1.79
TRIM3-201ENST00000345851 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.24■■□□□ 1.79
TRIM3-201ENST00000345851 JARID2Q92833 1246 aaPredicted RBP26.23■■□□□ 1.79
TRIM3-201ENST00000345851 HMOX1P09601 288 aa26.23■■□□□ 1.79
TRIM3-201ENST00000345851 MPNDQ8N594 471 aa26.23■■□□□ 1.79
TRIM3-201ENST00000345851 CPSF1Q10570 1443 aaKnown RBP26.22■■□□□ 1.79
TRIM3-201ENST00000345851 ELL2O00472 640 aaPredicted RBP26.22■■□□□ 1.79
TRIM3-201ENST00000345851 SMAP1Q8IYB5 467 aaPredicted RBP26.22■■□□□ 1.79
TRIM3-201ENST00000345851 CCDC39Q9UFE4 941 aa26.22■■□□□ 1.79
TRIM3-201ENST00000345851 CPS1P31327 1500 aa26.22■■□□□ 1.79
TRIM3-201ENST00000345851 ATP7BP35670 1465 aa26.22■■□□□ 1.79
TRIM3-201ENST00000345851 PTMAP06454 111 aaKnown RBP26.22■■□□□ 1.79
TRIM3-201ENST00000345851 LRSAM1Q6UWE0 723 aa26.22■■□□□ 1.79
TRIM3-201ENST00000345851 ACEP12821 1306 aa26.21■■□□□ 1.79
TRIM3-201ENST00000345851 ALDH1L2Q3SY69 923 aa26.21■■□□□ 1.79
TRIM3-201ENST00000345851 SIRT1Q96EB6 747 aa26.21■■□□□ 1.79
TRIM3-201ENST00000345851 KCNA6P17658 529 aa26.21■■□□□ 1.79
TRIM3-201ENST00000345851 IL16Q14005 1332 aa26.2■■□□□ 1.79
TRIM3-201ENST00000345851 A0A0U1RQG5 324 aaPredicted RBP26.2■■□□□ 1.78
TRIM3-201ENST00000345851 MTERF4Q7Z6M4 381 aaKnown RBP26.2■■□□□ 1.78
TRIM3-201ENST00000345851 ZDHHC9Q9Y397 364 aa26.2■■□□□ 1.78
TRIM3-201ENST00000345851 KIF20BQ96Q89 1820 aa26.2■■□□□ 1.78
TRIM3-201ENST00000345851 RIMS1Q86UR5 1692 aaKnown RBP26.2■■□□□ 1.78
TRIM3-201ENST00000345851 DNTTIP2Q5QJE6 756 aaKnown RBP26.19■■□□□ 1.78
TRIM3-201ENST00000345851 TSC1Q92574 1164 aa26.19■■□□□ 1.78
TRIM3-201ENST00000345851 TBX22Q9Y458 520 aa26.19■■□□□ 1.78
TRIM3-201ENST00000345851 COG3Q96JB2 828 aa26.18■■□□□ 1.78
TRIM3-201ENST00000345851 C16orf71Q8IYS4 520 aaPredicted RBP26.18■■□□□ 1.78
TRIM3-201ENST00000345851 USP26Q9BXU7 913 aa26.18■■□□□ 1.78
TRIM3-201ENST00000345851 KNDC1Q76NI1 1749 aa26.18■■□□□ 1.78
TRIM3-201ENST00000345851 MED14O60244 1454 aa26.17■■□□□ 1.78
TRIM3-201ENST00000345851 COL3A1P02461 1466 aaPredicted RBP26.17■■□□□ 1.78
TRIM3-201ENST00000345851 MCM5P33992 734 aa26.17■■□□□ 1.78
TRIM3-201ENST00000345851 PLEKHM2Q8IWE5 1019 aa26.17■■□□□ 1.78
TRIM3-201ENST00000345851 EDC4Q6P2E9 1401 aaKnown RBP26.17■■□□□ 1.78
TRIM3-201ENST00000345851 ARHGAP23Q9P227 1491 aa26.17■■□□□ 1.78
TRIM3-201ENST00000345851 THUMPD2Q9BTF0 503 aaKnown RBP26.17■■□□□ 1.78
TRIM3-201ENST00000345851 MAP2P11137 1827 aaKnown RBP26.16■■□□□ 1.78
TRIM3-201ENST00000345851 SLIT1O75093 1534 aa26.16■■□□□ 1.78
TRIM3-201ENST00000345851 ANKRD26Q9UPS8 1709 aa26.15■■□□□ 1.78
TRIM3-201ENST00000345851 TSPYL6Q8N831 410 aa26.15■■□□□ 1.78
TRIM3-201ENST00000345851 CWC22Q9HCG8 908 aaKnown RBP26.15■■□□□ 1.78
TRIM3-201ENST00000345851 APBB1O00213 710 aa26.13■■□□□ 1.77
TRIM3-201ENST00000345851 ST18O60284 1047 aa26.13■■□□□ 1.77
TRIM3-201ENST00000345851 PRKAR2BP31323 418 aa26.13■■□□□ 1.77
TRIM3-201ENST00000345851 OTUD7AQ8TE49 926 aaPredicted RBP26.13■■□□□ 1.77
TRIM3-201ENST00000345851 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.13■■□□□ 1.77
TRIM3-201ENST00000345851 KIAA2012Q0VF49 1180 aa26.12■■□□□ 1.77
TRIM3-201ENST00000345851 TTC22Q5TAA0 569 aa26.12■■□□□ 1.77
TRIM3-201ENST00000345851 MRPL50Q8N5N7 158 aaKnown RBP26.12■■□□□ 1.77
TRIM3-201ENST00000345851 CDC42BPGQ6DT37 1551 aa26.12■■□□□ 1.77
TRIM3-201ENST00000345851 CCDC94Q9BW85 323 aaPredicted RBP26.12■■□□□ 1.77
TRIM3-201ENST00000345851 TTC21BQ7Z4L5 1316 aa26.11■■□□□ 1.77
TRIM3-201ENST00000345851 FOXD4L6Q3SYB3 417 aaPredicted RBP26.11■■□□□ 1.77
TRIM3-201ENST00000345851 FOXD4L3Q6VB84 417 aaPredicted RBP26.11■■□□□ 1.77
TRIM3-201ENST00000345851 PHACTR3Q96KR7 559 aa26.11■■□□□ 1.77
TRIM3-201ENST00000345851 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
TRIM3-201ENST00000345851 CHMP4BQ9H444 224 aaKnown RBP26.11■■□□□ 1.77
TRIM3-201ENST00000345851 ZNF830Q96NB3 372 aaPredicted RBP26.1■■□□□ 1.77
TRIM3-201ENST00000345851 PNPLA6Q8IY17 1366 aa26.1■■□□□ 1.77
TRIM3-201ENST00000345851 NUTM2GQ5VZR2 741 aa26.1■■□□□ 1.77
TRIM3-201ENST00000345851 INTS3Q68E01 1043 aaKnown RBP26.1■■□□□ 1.77
TRIM3-201ENST00000345851 NGDNQ8NEJ9 315 aaKnown RBP26.1■■□□□ 1.77
TRIM3-201ENST00000345851 FAM177BA6PVY3 158 aa26.09■■□□□ 1.77
TRIM3-201ENST00000345851 VAMP4O75379 141 aa26.09■■□□□ 1.77
TRIM3-201ENST00000345851 CEP170BQ9Y4F5 1589 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms