RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
CDC42-202ENST00000344548 PDE3AQ14432 1141 aa17.51■□□□□ 0.39
CDC42-202ENST00000344548 ANKRD24Q8TF21 1146 aa17.51■□□□□ 0.39
CDC42-202ENST00000344548 CALD1Q05682 793 aaKnown RBP17.51■□□□□ 0.39
CDC42-202ENST00000344548 CHRNA2Q15822 529 aa17.5■□□□□ 0.39
CDC42-202ENST00000344548 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
CDC42-202ENST00000344548 CHL1O00533 1208 aa17.5■□□□□ 0.39
CDC42-202ENST00000344548 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
CDC42-202ENST00000344548 NOB1Q9ULX3 412 aaKnown RBP17.49■□□□□ 0.39
CDC42-202ENST00000344548 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
CDC42-202ENST00000344548 SOS2Q07890 1332 aaPredicted RBP17.48■□□□□ 0.39
CDC42-202ENST00000344548 CRYBG1Q9Y4K1 1723 aa17.48■□□□□ 0.39
CDC42-202ENST00000344548 TRIM27P14373 513 aa17.47■□□□□ 0.39
CDC42-202ENST00000344548 TWISTNBQ3B726 338 aaPredicted RBP17.47■□□□□ 0.39
CDC42-202ENST00000344548 ERBB3P21860 1342 aa17.47■□□□□ 0.39
CDC42-202ENST00000344548 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
CDC42-202ENST00000344548 COL18A1P39060 1754 aa17.46■□□□□ 0.39
CDC42-202ENST00000344548 GNAT3A8MTJ3 354 aa17.46■□□□□ 0.39
CDC42-202ENST00000344548 ZKSCAN2Q63HK3 967 aa17.46■□□□□ 0.39
CDC42-202ENST00000344548 KIAA0232Q92628 1395 aa17.46■□□□□ 0.38
CDC42-202ENST00000344548 NCAPD2Q15021 1401 aa17.45■□□□□ 0.38
CDC42-202ENST00000344548 MRPL50Q8N5N7 158 aaKnown RBP17.44■□□□□ 0.38
CDC42-202ENST00000344548 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
CDC42-202ENST00000344548 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
CDC42-202ENST00000344548 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
CDC42-202ENST00000344548 ATF7IPQ6VMQ6 1270 aa17.44■□□□□ 0.38
CDC42-202ENST00000344548 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
CDC42-202ENST00000344548 DZIP1LQ8IYY4 767 aaKnown RBP17.43■□□□□ 0.38
CDC42-202ENST00000344548 IGHDP01880 384 aa17.42■□□□□ 0.38
CDC42-202ENST00000344548 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
CDC42-202ENST00000344548 CAMTA1Q9Y6Y1 1673 aa17.41■□□□□ 0.38
CDC42-202ENST00000344548 LRRC37A3O60309 1634 aa17.41■□□□□ 0.38
CDC42-202ENST00000344548 HTATSF1O43719 755 aaKnown RBP17.41■□□□□ 0.38
CDC42-202ENST00000344548 MVPQ14764 893 aaKnown RBP17.4■□□□□ 0.38
CDC42-202ENST00000344548 TMEM57Q8N5G2 664 aa17.4■□□□□ 0.38
CDC42-202ENST00000344548 NLRP2Q9NX02 1062 aa17.4■□□□□ 0.38
CDC42-202ENST00000344548 PCDHB15Q9Y5E8 787 aa17.4■□□□□ 0.38
CDC42-202ENST00000344548 LMO7Q8WWI1 1683 aa17.4■□□□□ 0.38
CDC42-202ENST00000344548 BRPF1P55201 1214 aaPredicted RBP17.4■□□□□ 0.38
CDC42-202ENST00000344548 LTBP4Q8N2S1 1624 aa17.39■□□□□ 0.37
CDC42-202ENST00000344548 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
CDC42-202ENST00000344548 FTSJ3Q8IY81 847 aaKnown RBP17.39■□□□□ 0.37
CDC42-202ENST00000344548 ZNF428Q96B54 188 aa17.39■□□□□ 0.37
CDC42-202ENST00000344548 CPDO75976 1380 aa17.39■□□□□ 0.37
CDC42-202ENST00000344548 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
CDC42-202ENST00000344548 KIF16BQ96L93 1317 aa17.38■□□□□ 0.37
CDC42-202ENST00000344548 NHSL1Q5SYE7 1610 aa17.38■□□□□ 0.37
CDC42-202ENST00000344548 CEMIPQ8WUJ3 1361 aa17.38■□□□□ 0.37
CDC42-202ENST00000344548 FAM208AQ9UK61 1670 aaKnown RBP17.37■□□□□ 0.37
CDC42-202ENST00000344548 PLEKHO1Q53GL0 409 aaPredicted RBP17.37■□□□□ 0.37
CDC42-202ENST00000344548 CSB-PGBD3P0DP91 1061 aa17.36■□□□□ 0.37
CDC42-202ENST00000344548 TAF7Q15545 349 aaPredicted RBP17.36■□□□□ 0.37
CDC42-202ENST00000344548 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
CDC42-202ENST00000344548 PRDM11Q9NQV5 511 aa17.36■□□□□ 0.37
CDC42-202ENST00000344548 MEGF6O75095 1541 aa17.36■□□□□ 0.37
CDC42-202ENST00000344548 KCNQ3O43525 872 aa17.35■□□□□ 0.37
CDC42-202ENST00000344548 AKAP4Q5JQC9 854 aa17.35■□□□□ 0.37
CDC42-202ENST00000344548 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
CDC42-202ENST00000344548 AMOTQ4VCS5 1084 aa17.34■□□□□ 0.37
CDC42-202ENST00000344548 CENPQQ7L2Z9 268 aaPredicted RBP17.34■□□□□ 0.37
CDC42-202ENST00000344548 ABCA3Q99758 1704 aa17.34■□□□□ 0.37
CDC42-202ENST00000344548 RBM19Q9Y4C8 960 aaKnown RBP17.33■□□□□ 0.37
CDC42-202ENST00000344548 G2E3Q7L622 706 aa17.33■□□□□ 0.36
CDC42-202ENST00000344548 ROBO1Q9Y6N7 1651 aa17.33■□□□□ 0.36
CDC42-202ENST00000344548 RNMTO43148 476 aaKnown RBP17.32■□□□□ 0.36
CDC42-202ENST00000344548 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
CDC42-202ENST00000344548 NECTIN2Q92692 538 aa17.32■□□□□ 0.36
CDC42-202ENST00000344548 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
CDC42-202ENST00000344548 ARHGAP45Q92619 1136 aa17.32■□□□□ 0.36
CDC42-202ENST00000344548 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
CDC42-202ENST00000344548 RGS12O14924 1447 aa17.31■□□□□ 0.36
CDC42-202ENST00000344548 MS4A1P11836 297 aa17.31■□□□□ 0.36
CDC42-202ENST00000344548 C1orf141Q5JVX7 400 aa17.31■□□□□ 0.36
CDC42-202ENST00000344548 ZBTB40Q9NUA8 1239 aa17.31■□□□□ 0.36
CDC42-202ENST00000344548 ABCC4O15439 1325 aa17.31■□□□□ 0.36
CDC42-202ENST00000344548 DDX19BQ9UMR2 479 aa17.3■□□□□ 0.36
CDC42-202ENST00000344548 VIRMAQ69YN4 1812 aaKnown RBP17.29■□□□□ 0.36
CDC42-202ENST00000344548 ABCC6O95255 1503 aa17.29■□□□□ 0.36
CDC42-202ENST00000344548 COL5A2P05997 1499 aaPredicted RBP17.29■□□□□ 0.36
CDC42-202ENST00000344548 WDR17Q8IZU2 1322 aa17.28■□□□□ 0.36
CDC42-202ENST00000344548 ZBTB7BO15156 539 aaPredicted RBP17.28■□□□□ 0.36
CDC42-202ENST00000344548 CYP27B1O15528 508 aa17.28■□□□□ 0.36
CDC42-202ENST00000344548 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
CDC42-202ENST00000344548 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
CDC42-202ENST00000344548 TEFQ10587 303 aa17.28■□□□□ 0.36
CDC42-202ENST00000344548 STRN4Q9NRL3 753 aa17.28■□□□□ 0.36
CDC42-202ENST00000344548 PHKG2P15735 406 aa17.27■□□□□ 0.36
CDC42-202ENST00000344548 LARP1Q6PKG0 1096 aaKnown RBP17.27■□□□□ 0.36
CDC42-202ENST00000344548 TOM1L2Q6ZVM7 507 aa17.27■□□□□ 0.36
CDC42-202ENST00000344548 KDM6AO15550 1401 aaPredicted RBP17.27■□□□□ 0.36
CDC42-202ENST00000344548 BTBD11A6QL63 1104 aa17.27■□□□□ 0.35
CDC42-202ENST00000344548 C1orf115Q9H7X2 142 aa17.27■□□□□ 0.35
CDC42-202ENST00000344548 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
CDC42-202ENST00000344548 KDM3BQ7LBC6 1761 aa17.26■□□□□ 0.35
CDC42-202ENST00000344548 PRAMEF22A3QJZ6 481 aa17.25■□□□□ 0.35
CDC42-202ENST00000344548 F6X3S4 739 aa17.25■□□□□ 0.35
CDC42-202ENST00000344548 AAMPQ13685 434 aa17.25■□□□□ 0.35
CDC42-202ENST00000344548 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
CDC42-202ENST00000344548 ADAMTS7Q9UKP4 1686 aa17.25■□□□□ 0.35
CDC42-202ENST00000344548 RGS3P49796 1198 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms