RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PTGER2P43116 358 aa24.72■■□□□ 1.55
USF2-202ENST00000343550 BTAF1O14981 1849 aa24.72■■□□□ 1.55
USF2-202ENST00000343550 LRRC4BQ9NT99 713 aa24.71■■□□□ 1.55
USF2-202ENST00000343550 KAT6BQ8WYB5 2073 aa24.71■■□□□ 1.55
USF2-202ENST00000343550 PRIM1P49642 420 aaKnown RBP24.7■■□□□ 1.54
USF2-202ENST00000343550 SYTL4Q96C24 671 aaPredicted RBP24.7■■□□□ 1.54
USF2-202ENST00000343550 MTFR1LQ9H019 292 aa24.7■■□□□ 1.54
USF2-202ENST00000343550 DCAF8L1A6NGE4 600 aa24.69■■□□□ 1.54
USF2-202ENST00000343550 HSP90AB2PQ58FF8 381 aa24.69■■□□□ 1.54
USF2-202ENST00000343550 KNSTRNQ9Y448 316 aa24.69■■□□□ 1.54
USF2-202ENST00000343550 MEGF6O75095 1541 aa24.69■■□□□ 1.54
USF2-202ENST00000343550 SMG6Q86US8 1419 aaKnown RBP24.69■■□□□ 1.54
USF2-202ENST00000343550 SLC27A3Q5K4L6 730 aa24.68■■□□□ 1.54
USF2-202ENST00000343550 USHBP1Q8N6Y0 703 aa24.68■■□□□ 1.54
USF2-202ENST00000343550 RGPD2P0DJD1 1756 aa24.68■■□□□ 1.54
USF2-202ENST00000343550 INSRP06213 1382 aa24.68■■□□□ 1.54
USF2-202ENST00000343550 PER1O15534 1290 aaPredicted RBP24.67■■□□□ 1.54
USF2-202ENST00000343550 ZEB1P37275 1124 aaPredicted RBP24.66■■□□□ 1.54
USF2-202ENST00000343550 ZNF827Q17R98 1081 aa24.66■■□□□ 1.54
USF2-202ENST00000343550 RAPGEF4Q8WZA2 1011 aa24.66■■□□□ 1.54
USF2-202ENST00000343550 PAPPAQ13219 1627 aa24.66■■□□□ 1.54
USF2-202ENST00000343550 FLT4P35916 1363 aa24.65■■□□□ 1.54
USF2-202ENST00000343550 KIF24Q5T7B8 1368 aa24.65■■□□□ 1.54
USF2-202ENST00000343550 SGIP1Q9BQI5 828 aa24.65■■□□□ 1.54
USF2-202ENST00000343550 AKT1S1Q96B36 256 aa24.64■■□□□ 1.53
USF2-202ENST00000343550 TATP17735 454 aaPredicted RBP24.63■■□□□ 1.53
USF2-202ENST00000343550 AMER1Q5JTC6 1135 aaPredicted RBP24.63■■□□□ 1.53
USF2-202ENST00000343550 NSD2O96028 1365 aa24.62■■□□□ 1.53
USF2-202ENST00000343550 YY1P25490 414 aa24.62■■□□□ 1.53
USF2-202ENST00000343550 KCNQ4P56696 695 aa24.61■■□□□ 1.53
USF2-202ENST00000343550 EMILIN1Q9Y6C2 1016 aa24.61■■□□□ 1.53
USF2-202ENST00000343550 SHANK3Q9BYB0 1731 aa24.61■■□□□ 1.53
USF2-202ENST00000343550 TNNT2P45379 298 aaPredicted RBP24.61■■□□□ 1.53
USF2-202ENST00000343550 FHDC1Q9C0D6 1143 aaPredicted RBP24.61■■□□□ 1.53
USF2-202ENST00000343550 SYT17Q9BSW7 474 aa24.6■■□□□ 1.53
USF2-202ENST00000343550 POLKQ9UBT6 870 aa24.6■■□□□ 1.53
USF2-202ENST00000343550 MORC1Q86VD1 984 aa24.59■■□□□ 1.53
USF2-202ENST00000343550 DOT1LQ8TEK3 1739 aa24.59■■□□□ 1.53
USF2-202ENST00000343550 ANKRD26Q9UPS8 1709 aa24.58■■□□□ 1.53
USF2-202ENST00000343550 PPM1GO15355 546 aaPredicted RBP24.58■■□□□ 1.53
USF2-202ENST00000343550 ARXQ96QS3 562 aa24.58■■□□□ 1.53
USF2-202ENST00000343550 TFCP2L1Q9NZI6 479 aa24.57■■□□□ 1.52
USF2-202ENST00000343550 PCDH11XQ9BZA7 1347 aa24.57■■□□□ 1.52
USF2-202ENST00000343550 PCDH11YQ9BZA8 1340 aa24.57■■□□□ 1.52
USF2-202ENST00000343550 MAP2P11137 1827 aaKnown RBP24.57■■□□□ 1.52
USF2-202ENST00000343550 SLC16A10Q8TF71 515 aa24.56■■□□□ 1.52
USF2-202ENST00000343550 CCNL1Q9UK58 526 aaPredicted RBP24.56■■□□□ 1.52
USF2-202ENST00000343550 PNPLA7Q6ZV29 1317 aa24.55■■□□□ 1.52
USF2-202ENST00000343550 CYP27B1O15528 508 aa24.53■■□□□ 1.52
USF2-202ENST00000343550 CC2D1BQ5T0F9 858 aaKnown RBP24.52■■□□□ 1.52
USF2-202ENST00000343550 LY75O60449 1722 aa24.51■■□□□ 1.51
USF2-202ENST00000343550 NPC1L1Q9UHC9 1359 aa24.5■■□□□ 1.51
USF2-202ENST00000343550 MPRIPQ6WCQ1 1025 aa24.5■■□□□ 1.51
USF2-202ENST00000343550 POLD1P28340 1107 aa24.49■■□□□ 1.51
USF2-202ENST00000343550 EYA1Q99502 592 aa24.49■■□□□ 1.51
USF2-202ENST00000343550 UTRNP46939 3433 aa24.48■■□□□ 1.51
USF2-202ENST00000343550 NCAPD2Q15021 1401 aa24.48■■□□□ 1.51
USF2-202ENST00000343550 QSER1Q2KHR3 1735 aa24.48■■□□□ 1.51
USF2-202ENST00000343550 MAP3K5Q99683 1374 aa24.48■■□□□ 1.51
USF2-202ENST00000343550 SPG7Q9UQ90 795 aa24.47■■□□□ 1.51
USF2-202ENST00000343550 CNGB1Q14028 1251 aaPredicted RBP24.45■■□□□ 1.51
USF2-202ENST00000343550 NKX1-1Q15270 411 aaPredicted RBP24.45■■□□□ 1.51
USF2-202ENST00000343550 PALLDQ8WX93 1383 aa24.45■■□□□ 1.5
USF2-202ENST00000343550 HMGB2P26583 209 aaKnown RBP24.45■■□□□ 1.5
USF2-202ENST00000343550 COL23A1Q86Y22 540 aaPredicted RBP24.45■■□□□ 1.5
USF2-202ENST00000343550 MSH5O43196 834 aa24.44■■□□□ 1.5
USF2-202ENST00000343550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.44■■□□□ 1.5
USF2-202ENST00000343550 EIF4A2Q14240 407 aaKnown RBP24.43■■□□□ 1.5
USF2-202ENST00000343550 SMARCC1Q92922 1105 aaPredicted RBP24.43■■□□□ 1.5
USF2-202ENST00000343550 TUBGCP6Q96RT7 1819 aa24.43■■□□□ 1.5
USF2-202ENST00000343550 PKD1L3Q7Z443 1732 aa24.42■■□□□ 1.5
USF2-202ENST00000343550 KLHL34Q8N239 644 aa24.42■■□□□ 1.5
USF2-202ENST00000343550 PIGBQ92521 554 aa24.42■■□□□ 1.5
USF2-202ENST00000343550 MTHFSP49914 203 aa24.41■■□□□ 1.5
USF2-202ENST00000343550 COL24A1Q17RW2 1714 aa24.4■■□□□ 1.5
USF2-202ENST00000343550 TOGARAM1Q9Y4F4 1720 aa24.38■■□□□ 1.49
USF2-202ENST00000343550 DDX10Q13206 875 aaKnown RBP24.38■■□□□ 1.49
USF2-202ENST00000343550 GPR162Q16538 588 aa24.38■■□□□ 1.49
USF2-202ENST00000343550 IFNL2Q8IZJ0 200 aa24.38■■□□□ 1.49
USF2-202ENST00000343550 PHKG2P15735 406 aa24.37■■□□□ 1.49
USF2-202ENST00000343550 FLAD1Q8NFF5 587 aa24.37■■□□□ 1.49
USF2-202ENST00000343550 TMOD3Q9NYL9 352 aa24.36■■□□□ 1.49
USF2-202ENST00000343550 C5P01031 1676 aa24.36■■□□□ 1.49
USF2-202ENST00000343550 ITGB4P16144 1822 aa24.36■■□□□ 1.49
USF2-202ENST00000343550 MSL1Q68DK7 614 aa24.35■■□□□ 1.49
USF2-202ENST00000343550 NLGN2Q8NFZ4 835 aa24.34■■□□□ 1.49
USF2-202ENST00000343550 AK7Q96M32 723 aa24.34■■□□□ 1.49
USF2-202ENST00000343550 IGSF1Q8N6C5 1336 aa24.34■■□□□ 1.49
USF2-202ENST00000343550 LOC102724428A0A0B4J2F2 783 aa24.33■■□□□ 1.49
USF2-202ENST00000343550 IL13P35225 146 aa24.33■■□□□ 1.49
USF2-202ENST00000343550 SIK1P57059 783 aa24.33■■□□□ 1.49
USF2-202ENST00000343550 ZNF784Q8NCA9 323 aaPredicted RBP24.33■■□□□ 1.49
USF2-202ENST00000343550 ASAP1Q9ULH1 1129 aa24.33■■□□□ 1.49
USF2-202ENST00000343550 PLEKHG2Q9H7P9 1386 aa24.32■■□□□ 1.48
USF2-202ENST00000343550 PELP1Q8IZL8 1130 aaKnown RBP24.31■■□□□ 1.48
USF2-202ENST00000343550 TAF1LQ8IZX4 1826 aa24.31■■□□□ 1.48
USF2-202ENST00000343550 GOLGB1Q14789 3259 aaKnown RBP24.31■■□□□ 1.48
USF2-202ENST00000343550 AMIGO3Q86WK7 504 aa24.3■■□□□ 1.48
USF2-202ENST00000343550 C4BP0C0L5 1744 aa24.3■■□□□ 1.48
USF2-202ENST00000343550 LINC00116Q8NCU8 138 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms