RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 KIF16BQ96L93 1317 aa25.63■■□□□ 1.69
RTN1-202ENST00000342503 TRIM27P14373 513 aa25.63■■□□□ 1.69
RTN1-202ENST00000342503 TWISTNBQ3B726 338 aaPredicted RBP25.63■■□□□ 1.69
RTN1-202ENST00000342503 NBPF6Q5VWK0 638 aa25.63■■□□□ 1.69
RTN1-202ENST00000342503 FTSJ3Q8IY81 847 aaKnown RBP25.63■■□□□ 1.69
RTN1-202ENST00000342503 NBPF4Q96M43 638 aa25.63■■□□□ 1.69
RTN1-202ENST00000342503 ELL2O00472 640 aaPredicted RBP25.62■■□□□ 1.69
RTN1-202ENST00000342503 ATF7IPQ6VMQ6 1270 aa25.62■■□□□ 1.69
RTN1-202ENST00000342503 RGPD5Q99666 1765 aa25.61■■□□□ 1.69
RTN1-202ENST00000342503 BRPF1P55201 1214 aaPredicted RBP25.61■■□□□ 1.69
RTN1-202ENST00000342503 MVPQ14764 893 aaKnown RBP25.61■■□□□ 1.69
RTN1-202ENST00000342503 LRRC37A3O60309 1634 aa25.6■■□□□ 1.69
RTN1-202ENST00000342503 AAMPQ13685 434 aa25.6■■□□□ 1.69
RTN1-202ENST00000342503 MRPL50Q8N5N7 158 aaKnown RBP25.6■■□□□ 1.69
RTN1-202ENST00000342503 PXDNQ92626 1479 aa25.6■■□□□ 1.69
RTN1-202ENST00000342503 IPO8O15397 1037 aaKnown RBP25.6■■□□□ 1.69
RTN1-202ENST00000342503 HTATSF1O43719 755 aaKnown RBP25.6■■□□□ 1.69
RTN1-202ENST00000342503 TNS3Q68CZ2 1445 aa25.58■■□□□ 1.69
RTN1-202ENST00000342503 GNAT3A8MTJ3 354 aa25.57■■□□□ 1.68
RTN1-202ENST00000342503 LRRC59Q96AG4 307 aaKnown RBP25.57■■□□□ 1.68
RTN1-202ENST00000342503 TCERG1O14776 1098 aaKnown RBP25.57■■□□□ 1.68
RTN1-202ENST00000342503 ANKRD24Q8TF21 1146 aa25.57■■□□□ 1.68
RTN1-202ENST00000342503 MAP3K5Q99683 1374 aa25.56■■□□□ 1.68
RTN1-202ENST00000342503 CAMTA1Q9Y6Y1 1673 aa25.56■■□□□ 1.68
RTN1-202ENST00000342503 CRYBG1Q9Y4K1 1723 aa25.56■■□□□ 1.68
RTN1-202ENST00000342503 IGHDP01880 384 aa25.55■■□□□ 1.68
RTN1-202ENST00000342503 BRINP3Q76B58 766 aa25.55■■□□□ 1.68
RTN1-202ENST00000342503 AXIN2Q9Y2T1 843 aa25.55■■□□□ 1.68
RTN1-202ENST00000342503 KIAA0232Q92628 1395 aa25.55■■□□□ 1.68
RTN1-202ENST00000342503 ZC3H6P61129 1189 aaKnown RBP25.54■■□□□ 1.68
RTN1-202ENST00000342503 SKAP1Q86WV1 359 aa25.54■■□□□ 1.68
RTN1-202ENST00000342503 NCAPD2Q15021 1401 aa25.54■■□□□ 1.68
RTN1-202ENST00000342503 MIS18AQ9NYP9 233 aa25.54■■□□□ 1.68
RTN1-202ENST00000342503 SPATA31A3Q5VYP0 1347 aa25.53■■□□□ 1.68
RTN1-202ENST00000342503 KRT24Q2M2I5 525 aa25.53■■□□□ 1.68
RTN1-202ENST00000342503 TMEM57Q8N5G2 664 aa25.53■■□□□ 1.68
RTN1-202ENST00000342503 PCDHB15Q9Y5E8 787 aa25.52■■□□□ 1.68
RTN1-202ENST00000342503 COL18A1P39060 1754 aa25.52■■□□□ 1.68
RTN1-202ENST00000342503 ITPRIPQ8IWB1 547 aa25.51■■□□□ 1.68
RTN1-202ENST00000342503 ARHGAP45Q92619 1136 aa25.51■■□□□ 1.68
RTN1-202ENST00000342503 TSPYL4Q9UJ04 414 aa25.51■■□□□ 1.68
RTN1-202ENST00000342503 SLAIN2Q9P270 581 aa25.51■■□□□ 1.67
RTN1-202ENST00000342503 DDX19BQ9UMR2 479 aa25.51■■□□□ 1.67
RTN1-202ENST00000342503 IL17REQ8NFR9 667 aa25.5■■□□□ 1.67
RTN1-202ENST00000342503 CABLES1Q8TDN4 633 aa25.49■■□□□ 1.67
RTN1-202ENST00000342503 LMO7Q8WWI1 1683 aa25.49■■□□□ 1.67
RTN1-202ENST00000342503 HAP1P54257 671 aaPredicted RBP25.49■■□□□ 1.67
RTN1-202ENST00000342503 PLEKHO1Q53GL0 409 aaPredicted RBP25.46■■□□□ 1.67
RTN1-202ENST00000342503 ERBB3P21860 1342 aa25.46■■□□□ 1.67
RTN1-202ENST00000342503 VIRMAQ69YN4 1812 aaKnown RBP25.45■■□□□ 1.67
RTN1-202ENST00000342503 ABCC6O95255 1503 aa25.44■■□□□ 1.66
RTN1-202ENST00000342503 AMOTQ4VCS5 1084 aa25.43■■□□□ 1.66
RTN1-202ENST00000342503 ABCC4O15439 1325 aa25.43■■□□□ 1.66
RTN1-202ENST00000342503 SOS2Q07890 1332 aaPredicted RBP25.43■■□□□ 1.66
RTN1-202ENST00000342503 TAF7Q15545 349 aaPredicted RBP25.43■■□□□ 1.66
RTN1-202ENST00000342503 ZNF530Q6P9A1 599 aaPredicted RBP25.43■■□□□ 1.66
RTN1-202ENST00000342503 API5Q9BZZ5 524 aaKnown RBP25.43■■□□□ 1.66
RTN1-202ENST00000342503 RWDD1Q9H446 243 aaPredicted RBP25.43■■□□□ 1.66
RTN1-202ENST00000342503 BABAM1Q9NWV8 329 aa25.43■■□□□ 1.66
RTN1-202ENST00000342503 CEMIPQ8WUJ3 1361 aa25.42■■□□□ 1.66
RTN1-202ENST00000342503 FAM208AQ9UK61 1670 aaKnown RBP25.41■■□□□ 1.66
RTN1-202ENST00000342503 AKAP4Q5JQC9 854 aa25.41■■□□□ 1.66
RTN1-202ENST00000342503 ZBTB40Q9NUA8 1239 aa25.41■■□□□ 1.66
RTN1-202ENST00000342503 LGR6Q9HBX8 967 aa25.4■■□□□ 1.66
RTN1-202ENST00000342503 CPDO75976 1380 aa25.39■■□□□ 1.66
RTN1-202ENST00000342503 NHSL1Q5SYE7 1610 aa25.39■■□□□ 1.65
RTN1-202ENST00000342503 CHRNA2Q15822 529 aa25.39■■□□□ 1.65
RTN1-202ENST00000342503 KDM3BQ7LBC6 1761 aa25.38■■□□□ 1.65
RTN1-202ENST00000342503 PDE4AP27815 886 aa25.37■■□□□ 1.65
RTN1-202ENST00000342503 NLRP2Q9NX02 1062 aa25.37■■□□□ 1.65
RTN1-202ENST00000342503 RGS3P49796 1198 aa25.37■■□□□ 1.65
RTN1-202ENST00000342503 ABCA3Q99758 1704 aa25.36■■□□□ 1.65
RTN1-202ENST00000342503 C1orf141Q5JVX7 400 aa25.36■■□□□ 1.65
RTN1-202ENST00000342503 RGS12O14924 1447 aa25.36■■□□□ 1.65
RTN1-202ENST00000342503 ZBTB7BO15156 539 aaPredicted RBP25.35■■□□□ 1.65
RTN1-202ENST00000342503 SLC4A2P04920 1241 aa25.34■■□□□ 1.65
RTN1-202ENST00000342503 HDAC1Q13547 482 aaPredicted RBP25.34■■□□□ 1.65
RTN1-202ENST00000342503 MPRIPQ6WCQ1 1025 aa25.34■■□□□ 1.65
RTN1-202ENST00000342503 BACH2Q9BYV9 841 aa25.34■■□□□ 1.65
RTN1-202ENST00000342503 CHMP4BQ9H444 224 aaKnown RBP25.34■■□□□ 1.65
RTN1-202ENST00000342503 CSB-PGBD3P0DP91 1061 aa25.34■■□□□ 1.65
RTN1-202ENST00000342503 PTPRCP08575 1304 aa25.33■■□□□ 1.65
RTN1-202ENST00000342503 RNMTO43148 476 aaKnown RBP25.33■■□□□ 1.65
RTN1-202ENST00000342503 SOS1Q07889 1333 aaPredicted RBP25.33■■□□□ 1.65
RTN1-202ENST00000342503 OVOS2A0A0G2JMS6 1433 aa25.32■■□□□ 1.64
RTN1-202ENST00000342503 RAPGEF4Q8WZA2 1011 aa25.32■■□□□ 1.64
RTN1-202ENST00000342503 CACNA1FO60840 1977 aa25.31■■□□□ 1.64
RTN1-202ENST00000342503 ADAMTS7Q9UKP4 1686 aa25.31■■□□□ 1.64
RTN1-202ENST00000342503 SIPA1L3O60292 1781 aaPredicted RBP25.31■■□□□ 1.64
RTN1-202ENST00000342503 TEFQ10587 303 aa25.31■■□□□ 1.64
RTN1-202ENST00000342503 PDZRN3Q9UPQ7 1066 aa25.31■■□□□ 1.64
RTN1-202ENST00000342503 TATP17735 454 aaPredicted RBP25.3■■□□□ 1.64
RTN1-202ENST00000342503 MEGF6O75095 1541 aa25.29■■□□□ 1.64
RTN1-202ENST00000342503 CCDC30Q5VVM6 783 aa25.29■■□□□ 1.64
RTN1-202ENST00000342503 INTS3Q68E01 1043 aaKnown RBP25.29■■□□□ 1.64
RTN1-202ENST00000342503 G2E3Q7L622 706 aa25.29■■□□□ 1.64
RTN1-202ENST00000342503 STK31Q9BXU1 1019 aa25.29■■□□□ 1.64
RTN1-202ENST00000342503 BTBD11A6QL63 1104 aa25.27■■□□□ 1.64
RTN1-202ENST00000342503 PRDM11Q9NQV5 511 aa25.27■■□□□ 1.64
RTN1-202ENST00000342503 SCN11AQ9UI33 1791 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms