RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CGNL1Q0VF96 1302 aa23.62■■□□□ 1.37
BRCC3-202ENST00000340647 NCAPD2Q15021 1401 aa23.62■■□□□ 1.37
BRCC3-202ENST00000340647 TXNRD1Q16881 649 aa23.62■■□□□ 1.37
BRCC3-202ENST00000340647 PAPPAQ13219 1627 aa23.62■■□□□ 1.37
BRCC3-202ENST00000340647 DDX54Q8TDD1 881 aaKnown RBP23.61■■□□□ 1.37
BRCC3-202ENST00000340647 PDGFDQ9GZP0 370 aaPredicted RBP23.6■■□□□ 1.37
BRCC3-202ENST00000340647 POLKQ9UBT6 870 aa23.6■■□□□ 1.37
BRCC3-202ENST00000340647 NSD2O96028 1365 aa23.6■■□□□ 1.37
BRCC3-202ENST00000340647 NBPF14Q5TI25 921 aa23.59■■□□□ 1.37
BRCC3-202ENST00000340647 PKD1L3Q7Z443 1732 aa23.59■■□□□ 1.37
BRCC3-202ENST00000340647 WASHC2AQ641Q2 1341 aa23.59■■□□□ 1.37
BRCC3-202ENST00000340647 ZCRB1Q8TBF4 217 aaKnown RBP23.58■■□□□ 1.37
BRCC3-202ENST00000340647 LY75O60449 1722 aa23.57■■□□□ 1.36
BRCC3-202ENST00000340647 TOGARAM1Q9Y4F4 1720 aa23.56■■□□□ 1.36
BRCC3-202ENST00000340647 SMG6Q86US8 1419 aaKnown RBP23.56■■□□□ 1.36
BRCC3-202ENST00000340647 LRRC4BQ9NT99 713 aa23.55■■□□□ 1.36
BRCC3-202ENST00000340647 KIF7Q2M1P5 1343 aa23.55■■□□□ 1.36
BRCC3-202ENST00000340647 ITGB4P16144 1822 aa23.54■■□□□ 1.36
BRCC3-202ENST00000340647 PPM1GO15355 546 aaPredicted RBP23.52■■□□□ 1.36
BRCC3-202ENST00000340647 TNNT2P45379 298 aaPredicted RBP23.52■■□□□ 1.36
BRCC3-202ENST00000340647 PRIM1P49642 420 aaKnown RBP23.52■■□□□ 1.36
BRCC3-202ENST00000340647 EYA1Q99502 592 aa23.52■■□□□ 1.36
BRCC3-202ENST00000340647 SPON1Q9HCB6 807 aa23.52■■□□□ 1.36
BRCC3-202ENST00000340647 TUBGCP6Q96RT7 1819 aa23.52■■□□□ 1.36
BRCC3-202ENST00000340647 CYP27B1O15528 508 aa23.5■■□□□ 1.35
BRCC3-202ENST00000340647 SLC15A2Q16348 729 aa23.5■■□□□ 1.35
BRCC3-202ENST00000340647 RAPGEF4Q8WZA2 1011 aa23.5■■□□□ 1.35
BRCC3-202ENST00000340647 TATP17735 454 aaPredicted RBP23.49■■□□□ 1.35
BRCC3-202ENST00000340647 EIF4A2Q14240 407 aaKnown RBP23.49■■□□□ 1.35
BRCC3-202ENST00000340647 YY1P25490 414 aa23.48■■□□□ 1.35
BRCC3-202ENST00000340647 AMER1Q5JTC6 1135 aaPredicted RBP23.48■■□□□ 1.35
BRCC3-202ENST00000340647 QSER1Q2KHR3 1735 aa23.47■■□□□ 1.35
BRCC3-202ENST00000340647 PER1O15534 1290 aaPredicted RBP23.47■■□□□ 1.35
BRCC3-202ENST00000340647 ZNF827Q17R98 1081 aa23.47■■□□□ 1.35
BRCC3-202ENST00000340647 KCNQ4P56696 695 aa23.46■■□□□ 1.35
BRCC3-202ENST00000340647 PPP1R1BQ9UD71 204 aaPredicted RBP23.46■■□□□ 1.35
BRCC3-202ENST00000340647 PCDH11XQ9BZA7 1347 aa23.44■■□□□ 1.34
BRCC3-202ENST00000340647 PCDH11YQ9BZA8 1340 aa23.44■■□□□ 1.34
BRCC3-202ENST00000340647 SYTL4Q96C24 671 aaPredicted RBP23.44■■□□□ 1.34
BRCC3-202ENST00000340647 STK32BQ9NY57 414 aa23.44■■□□□ 1.34
BRCC3-202ENST00000340647 TAF1LQ8IZX4 1826 aa23.43■■□□□ 1.34
BRCC3-202ENST00000340647 PTGER2P43116 358 aa23.43■■□□□ 1.34
BRCC3-202ENST00000340647 AKT1S1Q96B36 256 aa23.43■■□□□ 1.34
BRCC3-202ENST00000340647 COL24A1Q17RW2 1714 aa23.42■■□□□ 1.34
BRCC3-202ENST00000340647 IGSF1Q8N6C5 1336 aa23.41■■□□□ 1.34
BRCC3-202ENST00000340647 ZBTB7AO95365 584 aa23.41■■□□□ 1.34
BRCC3-202ENST00000340647 NKX1-1Q15270 411 aaPredicted RBP23.41■■□□□ 1.34
BRCC3-202ENST00000340647 UTRNP46939 3433 aa23.41■■□□□ 1.34
BRCC3-202ENST00000340647 MORC1Q86VD1 984 aa23.4■■□□□ 1.34
BRCC3-202ENST00000340647 SGIP1Q9BQI5 828 aa23.4■■□□□ 1.34
BRCC3-202ENST00000340647 SLC27A3Q5K4L6 730 aa23.39■■□□□ 1.33
BRCC3-202ENST00000340647 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.33
BRCC3-202ENST00000340647 C5P01031 1676 aa23.38■■□□□ 1.33
BRCC3-202ENST00000340647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.37■■□□□ 1.33
BRCC3-202ENST00000340647 ATF5Q9Y2D1 282 aaPredicted RBP23.37■■□□□ 1.33
BRCC3-202ENST00000340647 PNPLA7Q6ZV29 1317 aa23.34■■□□□ 1.33
BRCC3-202ENST00000340647 PHKG2P15735 406 aa23.34■■□□□ 1.33
BRCC3-202ENST00000340647 MPRIPQ6WCQ1 1025 aa23.34■■□□□ 1.33
BRCC3-202ENST00000340647 AEBP1Q8IUX7 1158 aa23.34■■□□□ 1.33
BRCC3-202ENST00000340647 SPG7Q9UQ90 795 aa23.34■■□□□ 1.33
BRCC3-202ENST00000340647 IL13P35225 146 aa23.33■■□□□ 1.33
BRCC3-202ENST00000340647 PIGBQ92521 554 aa23.33■■□□□ 1.33
BRCC3-202ENST00000340647 MTFR1LQ9H019 292 aa23.32■■□□□ 1.32
BRCC3-202ENST00000340647 CCNL1Q9UK58 526 aaPredicted RBP23.32■■□□□ 1.32
BRCC3-202ENST00000340647 PLEKHG2Q9H7P9 1386 aa23.31■■□□□ 1.32
BRCC3-202ENST00000340647 KDRP35968 1356 aa23.3■■□□□ 1.32
BRCC3-202ENST00000340647 PALLDQ8WX93 1383 aa23.3■■□□□ 1.32
BRCC3-202ENST00000340647 DCAF8L1A6NGE4 600 aa23.29■■□□□ 1.32
BRCC3-202ENST00000340647 IFNL2Q8IZJ0 200 aa23.29■■□□□ 1.32
BRCC3-202ENST00000340647 UBR3Q6ZT12 1888 aa23.28■■□□□ 1.32
BRCC3-202ENST00000340647 MTHFSP49914 203 aa23.28■■□□□ 1.32
BRCC3-202ENST00000340647 CC2D1BQ5T0F9 858 aaKnown RBP23.28■■□□□ 1.32
BRCC3-202ENST00000340647 VIRMAQ69YN4 1812 aaKnown RBP23.28■■□□□ 1.32
BRCC3-202ENST00000340647 C4BP0C0L5 1744 aa23.28■■□□□ 1.32
BRCC3-202ENST00000340647 KDM6AO15550 1401 aaPredicted RBP23.27■■□□□ 1.32
BRCC3-202ENST00000340647 AMIGO3Q86WK7 504 aa23.27■■□□□ 1.32
BRCC3-202ENST00000340647 NPC1L1Q9UHC9 1359 aa23.27■■□□□ 1.31
BRCC3-202ENST00000340647 COL3A1P02461 1466 aaPredicted RBP23.25■■□□□ 1.31
BRCC3-202ENST00000340647 FHDC1Q9C0D6 1143 aaPredicted RBP23.25■■□□□ 1.31
BRCC3-202ENST00000340647 ASAP1Q9ULH1 1129 aa23.25■■□□□ 1.31
BRCC3-202ENST00000340647 SCN11AQ9UI33 1791 aa23.24■■□□□ 1.31
BRCC3-202ENST00000340647 SULT6B1Q6IMI4 303 aa23.24■■□□□ 1.31
BRCC3-202ENST00000340647 COL23A1Q86Y22 540 aaPredicted RBP23.24■■□□□ 1.31
BRCC3-202ENST00000340647 SYT17Q9BSW7 474 aa23.24■■□□□ 1.31
BRCC3-202ENST00000340647 TFCP2L1Q9NZI6 479 aa23.24■■□□□ 1.31
BRCC3-202ENST00000340647 ATG3Q9NT62 314 aa23.22■■□□□ 1.31
BRCC3-202ENST00000340647 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
BRCC3-202ENST00000340647 SMIM5Q71RC9 77 aa23.21■■□□□ 1.31
BRCC3-202ENST00000340647 SLC16A10Q8TF71 515 aa23.21■■□□□ 1.31
BRCC3-202ENST00000340647 SMARCC1Q92922 1105 aaPredicted RBP23.21■■□□□ 1.31
BRCC3-202ENST00000340647 SLC4A9Q96Q91 983 aa23.21■■□□□ 1.31
BRCC3-202ENST00000340647 TMOD3Q9NYL9 352 aa23.21■■□□□ 1.31
BRCC3-202ENST00000340647 ZNF831Q5JPB2 1677 aa23.2■■□□□ 1.3
BRCC3-202ENST00000340647 ITPK1Q13572 414 aa23.2■■□□□ 1.3
BRCC3-202ENST00000340647 LOC102724428A0A0B4J2F2 783 aa23.19■■□□□ 1.3
BRCC3-202ENST00000340647 SIK1P57059 783 aa23.19■■□□□ 1.3
BRCC3-202ENST00000340647 ZNF530Q6P9A1 599 aaPredicted RBP23.19■■□□□ 1.3
BRCC3-202ENST00000340647 ZNF784Q8NCA9 323 aaPredicted RBP23.19■■□□□ 1.3
BRCC3-202ENST00000340647 LINC00116Q8NCU8 138 aa23.19■■□□□ 1.3
BRCC3-202ENST00000340647 COL5A3P25940 1745 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms