RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 USP25Q9UHP3 1055 aa11.44□□□□□ -0.58
NECAP1-201ENST00000339754 ADCY5O95622 1261 aa11.43□□□□□ -0.58
NECAP1-201ENST00000339754 FAM184AQ8NB25 1140 aa11.43□□□□□ -0.58
NECAP1-201ENST00000339754 ZNF428Q96B54 188 aa11.43□□□□□ -0.58
NECAP1-201ENST00000339754 LMTK2Q8IWU2 1503 aa11.43□□□□□ -0.58
NECAP1-201ENST00000339754 RIOK3O14730 519 aaKnown RBP11.43□□□□□ -0.58
NECAP1-201ENST00000339754 CTIFO43310 598 aaKnown RBP11.43□□□□□ -0.58
NECAP1-201ENST00000339754 TAF3Q5VWG9 929 aa11.43□□□□□ -0.58
NECAP1-201ENST00000339754 SYAP1Q96A49 352 aaPredicted RBP11.43□□□□□ -0.58
NECAP1-201ENST00000339754 DCTPP1Q9H773 170 aa11.43□□□□□ -0.58
NECAP1-201ENST00000339754 PTCH1Q13635 1447 aa11.43□□□□□ -0.58
NECAP1-201ENST00000339754 GADD45BO75293 160 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-201ENST00000339754 SDSP20132 328 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 TMX3Q96JJ7 454 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 YEATS2Q9ULM3 1422 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 GLI2P10070 1586 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 NSD2O96028 1365 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 VAMP4O75379 141 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 KIAA1524Q8TCG1 905 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 TRAK1Q9UPV9 953 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 NPATQ14207 1427 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 ZC3H13Q5T200 1668 aaKnown RBP11.42□□□□□ -0.58
NECAP1-201ENST00000339754 ABCC4O15439 1325 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 DIP2CQ9Y2E4 1556 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 COL3A1P02461 1466 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-201ENST00000339754 NRXN1Q9ULB1 1477 aa11.42□□□□□ -0.58
NECAP1-201ENST00000339754 RICTORQ6R327 1708 aa11.41□□□□□ -0.58
NECAP1-201ENST00000339754 CACNB1Q02641 598 aaPredicted RBP11.41□□□□□ -0.58
NECAP1-201ENST00000339754 FEZ1Q99689 392 aa11.41□□□□□ -0.58
NECAP1-201ENST00000339754 CFAP65Q6ZU64 1925 aaKnown RBP11.41□□□□□ -0.58
NECAP1-201ENST00000339754 PHF14O94880 888 aa11.41□□□□□ -0.58
NECAP1-201ENST00000339754 CUL4AQ13619 759 aa11.41□□□□□ -0.58
NECAP1-201ENST00000339754 OTUD7AQ8TE49 926 aaPredicted RBP11.41□□□□□ -0.58
NECAP1-201ENST00000339754 DIAPH3Q9NSV4 1193 aa11.41□□□□□ -0.58
NECAP1-201ENST00000339754 IFT172Q9UG01 1749 aa11.4□□□□□ -0.58
NECAP1-201ENST00000339754 OGFRQ9NZT2 677 aa11.4□□□□□ -0.58
NECAP1-201ENST00000339754 ABCC3O15438 1527 aa11.4□□□□□ -0.59
NECAP1-201ENST00000339754 ANKRD36BQ8N2N9 1353 aa11.4□□□□□ -0.59
NECAP1-201ENST00000339754 DIP2BQ9P265 1576 aa11.4□□□□□ -0.59
NECAP1-201ENST00000339754 TSPOAP1O95153 1857 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 QRICH2Q9H0J4 1663 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 SMARCA5O60264 1052 aaPredicted RBP11.39□□□□□ -0.59
NECAP1-201ENST00000339754 KDM4AO75164 1064 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 USP48Q86UV5 1035 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 TSPYL6Q8N831 410 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 KCNF1Q9H3M0 494 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 PYCARDQ9ULZ3 195 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 KIF1BO60333 1816 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 KNDC1Q76NI1 1749 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 REC8O95072 547 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 NEK4P51957 841 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 GDPD2Q9HCC8 539 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 NAP1L2Q9ULW6 460 aaPredicted RBP11.39□□□□□ -0.59
NECAP1-201ENST00000339754 SETBP1Q9Y6X0 1596 aa11.39□□□□□ -0.59
NECAP1-201ENST00000339754 MROH2AA6NES4 1674 aa11.38□□□□□ -0.59
NECAP1-201ENST00000339754 ATAD2Q6PL18 1390 aa11.38□□□□□ -0.59
NECAP1-201ENST00000339754 AP5Z1O43299 807 aa11.38□□□□□ -0.59
NECAP1-201ENST00000339754 CASC1Q6TDU7 716 aa11.38□□□□□ -0.59
NECAP1-201ENST00000339754 INTS4Q96HW7 963 aaKnown RBP11.38□□□□□ -0.59
NECAP1-201ENST00000339754 CGNQ9P2M7 1197 aaKnown RBP11.38□□□□□ -0.59
NECAP1-201ENST00000339754 ERC2O15083 957 aa11.37□□□□□ -0.59
NECAP1-201ENST00000339754 HCLS1P14317 486 aaPredicted RBP11.37□□□□□ -0.59
NECAP1-201ENST00000339754 ZNF771Q7L3S4 317 aaPredicted RBP11.37□□□□□ -0.59
NECAP1-201ENST00000339754 PUS7Q96PZ0 661 aaKnown RBP11.37□□□□□ -0.59
NECAP1-201ENST00000339754 ZBTB22O15209 634 aa11.37□□□□□ -0.59
NECAP1-201ENST00000339754 SLFN14P0C7P3 912 aa11.37□□□□□ -0.59
NECAP1-201ENST00000339754 MCM2P49736 904 aa11.37□□□□□ -0.59
NECAP1-201ENST00000339754 CCDC183Q5T5S1 534 aa11.37□□□□□ -0.59
NECAP1-201ENST00000339754 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
NECAP1-201ENST00000339754 MX1P20591 662 aa11.36□□□□□ -0.59
NECAP1-201ENST00000339754 GABPB1Q06547 395 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-201ENST00000339754 NCBP1Q09161 790 aaKnown RBP11.36□□□□□ -0.59
NECAP1-201ENST00000339754 CAMSAP1Q5T5Y3 1602 aa11.36□□□□□ -0.59
NECAP1-201ENST00000339754 CHAF1AQ13111 956 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-201ENST00000339754 FOXD4L6Q3SYB3 417 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-201ENST00000339754 FOXD4L3Q6VB84 417 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-201ENST00000339754 TMEM87AQ8NBN3 555 aa11.36□□□□□ -0.59
NECAP1-201ENST00000339754 BCL11BQ9C0K0 894 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-201ENST00000339754 C14orf93Q9H972 538 aaKnown RBP11.36□□□□□ -0.59
NECAP1-201ENST00000339754 TCHHQ07283 1943 aa11.36□□□□□ -0.59
NECAP1-201ENST00000339754 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
NECAP1-201ENST00000339754 FUCA2Q9BTY2 467 aa11.35□□□□□ -0.59
NECAP1-201ENST00000339754 RNF216Q9NWF9 866 aaPredicted RBP11.35□□□□□ -0.59
NECAP1-201ENST00000339754 KIF24Q5T7B8 1368 aa11.35□□□□□ -0.59
NECAP1-201ENST00000339754 SYCP1Q15431 976 aa11.35□□□□□ -0.59
NECAP1-201ENST00000339754 NUTM2DQ5VT03 806 aaPredicted RBP11.35□□□□□ -0.59
NECAP1-201ENST00000339754 TMEM132EQ6IEE7 984 aa11.35□□□□□ -0.59
NECAP1-201ENST00000339754 GGNBP2Q9H3C7 697 aa11.35□□□□□ -0.59
NECAP1-201ENST00000339754 ADGRB3O60242 1522 aa11.35□□□□□ -0.59
NECAP1-201ENST00000339754 ELL2O00472 640 aaPredicted RBP11.34□□□□□ -0.59
NECAP1-201ENST00000339754 DDX41Q9UJV9 622 aaKnown RBP11.34□□□□□ -0.59
NECAP1-201ENST00000339754 ADGRB1O14514 1584 aa11.34□□□□□ -0.59
NECAP1-201ENST00000339754 SIGLEC1Q9BZZ2 1709 aa11.34□□□□□ -0.59
NECAP1-201ENST00000339754 RTL1A6NKG5 1358 aa11.34□□□□□ -0.59
NECAP1-201ENST00000339754 DIAPH1O60610 1272 aaKnown RBP11.34□□□□□ -0.59
NECAP1-201ENST00000339754 TPM3P06753 285 aa11.34□□□□□ -0.59
NECAP1-201ENST00000339754 IPO4Q8TEX9 1081 aaKnown RBP11.34□□□□□ -0.59
NECAP1-201ENST00000339754 API5Q9BZZ5 524 aaKnown RBP11.34□□□□□ -0.59
NECAP1-201ENST00000339754 MORC2Q9Y6X9 1032 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms