RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 THUMPD2Q9BTF0 503 aaKnown RBP14.57□□□□□ -0.08
RBM39-202ENST00000338163 PPIP5K1Q6PFW1 1433 aa14.57□□□□□ -0.08
RBM39-202ENST00000338163 DLC1Q96QB1 1528 aa14.56□□□□□ -0.08
RBM39-202ENST00000338163 NUCB2P80303 420 aa14.56□□□□□ -0.08
RBM39-202ENST00000338163 AK9Q5TCS8 1911 aa14.56□□□□□ -0.08
RBM39-202ENST00000338163 ZNF445P59923 1031 aa14.56□□□□□ -0.08
RBM39-202ENST00000338163 QRICH2Q9H0J4 1663 aa14.55□□□□□ -0.08
RBM39-202ENST00000338163 ZBTB7BO15156 539 aaPredicted RBP14.55□□□□□ -0.08
RBM39-202ENST00000338163 LMBRD1Q9NUN5 540 aa14.55□□□□□ -0.08
RBM39-202ENST00000338163 WASLO00401 505 aaPredicted RBP14.55□□□□□ -0.08
RBM39-202ENST00000338163 ZGPATQ8N5A5 531 aaKnown RBP14.55□□□□□ -0.08
RBM39-202ENST00000338163 NOL7Q9UMY1 257 aaKnown RBP14.55□□□□□ -0.08
RBM39-202ENST00000338163 IBTKQ9P2D0 1353 aaPredicted RBP14.55□□□□□ -0.08
RBM39-202ENST00000338163 PTCH1Q13635 1447 aa14.54□□□□□ -0.08
RBM39-202ENST00000338163 CPS1P31327 1500 aa14.54□□□□□ -0.08
RBM39-202ENST00000338163 SYCE3A1L190 88 aa14.54□□□□□ -0.08
RBM39-202ENST00000338163 GSPT1P15170 499 aaKnown RBP14.54□□□□□ -0.08
RBM39-202ENST00000338163 RABEP1Q15276 862 aa14.54□□□□□ -0.08
RBM39-202ENST00000338163 SIRT2Q8IXJ6 389 aa14.54□□□□□ -0.08
RBM39-202ENST00000338163 DIAPH1O60610 1272 aaKnown RBP14.53□□□□□ -0.08
RBM39-202ENST00000338163 PTMAP06454 111 aaKnown RBP14.53□□□□□ -0.08
RBM39-202ENST00000338163 ALDH1L2Q3SY69 923 aa14.53□□□□□ -0.08
RBM39-202ENST00000338163 ANKRD36BQ8N2N9 1353 aa14.53□□□□□ -0.08
RBM39-202ENST00000338163 IL16Q14005 1332 aa14.52□□□□□ -0.08
RBM39-202ENST00000338163 TSPYL6Q8N831 410 aa14.52□□□□□ -0.08
RBM39-202ENST00000338163 ATAD2Q6PL18 1390 aa14.52□□□□□ -0.09
RBM39-202ENST00000338163 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
RBM39-202ENST00000338163 CLEC17AQ6ZS10 378 aa14.52□□□□□ -0.09
RBM39-202ENST00000338163 MPNDQ8N594 471 aa14.52□□□□□ -0.09
RBM39-202ENST00000338163 GPT2Q8TD30 523 aa14.52□□□□□ -0.09
RBM39-202ENST00000338163 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.52□□□□□ -0.09
RBM39-202ENST00000338163 TULP4Q9NRJ4 1543 aa14.52□□□□□ -0.09
RBM39-202ENST00000338163 XRN1Q8IZH2 1706 aaKnown RBP14.51□□□□□ -0.09
RBM39-202ENST00000338163 PRKAR2BP31323 418 aa14.51□□□□□ -0.09
RBM39-202ENST00000338163 C16orf71Q8IYS4 520 aaPredicted RBP14.51□□□□□ -0.09
RBM39-202ENST00000338163 ZKSCAN5Q9Y2L8 839 aa14.51□□□□□ -0.09
RBM39-202ENST00000338163 CHD2O14647 1828 aaKnown RBP14.51□□□□□ -0.09
RBM39-202ENST00000338163 HMOX1P09601 288 aa14.51□□□□□ -0.09
RBM39-202ENST00000338163 FBLN1P23142 703 aa14.51□□□□□ -0.09
RBM39-202ENST00000338163 FOXD4L6Q3SYB3 417 aaPredicted RBP14.51□□□□□ -0.09
RBM39-202ENST00000338163 DNTTIP2Q5QJE6 756 aaKnown RBP14.51□□□□□ -0.09
RBM39-202ENST00000338163 FOXD4L3Q6VB84 417 aaPredicted RBP14.51□□□□□ -0.09
RBM39-202ENST00000338163 CHMP4BQ9H444 224 aaKnown RBP14.51□□□□□ -0.09
RBM39-202ENST00000338163 PRDM10Q9NQV6 1147 aa14.51□□□□□ -0.09
RBM39-202ENST00000338163 TMEM94Q12767 1356 aa14.51□□□□□ -0.09
RBM39-202ENST00000338163 TPRNQ4KMQ1 711 aa14.51□□□□□ -0.09
RBM39-202ENST00000338163 ADGRB2O60241 1585 aa14.5□□□□□ -0.09
RBM39-202ENST00000338163 ST18O60284 1047 aa14.5□□□□□ -0.09
RBM39-202ENST00000338163 ZNF500O60304 480 aaPredicted RBP14.5□□□□□ -0.09
RBM39-202ENST00000338163 HS1BP3Q53T59 392 aa14.5□□□□□ -0.09
RBM39-202ENST00000338163 MAP7D2Q96T17 732 aa14.5□□□□□ -0.09
RBM39-202ENST00000338163 NSD2O96028 1365 aa14.5□□□□□ -0.09
RBM39-202ENST00000338163 KNDC1Q76NI1 1749 aa14.5□□□□□ -0.09
RBM39-202ENST00000338163 NUDT16Q96DE0 195 aaKnown RBP14.5□□□□□ -0.09
RBM39-202ENST00000338163 CABP1Q9NZU7 370 aa14.5□□□□□ -0.09
RBM39-202ENST00000338163 TMEM63CQ9P1W3 806 aa14.5□□□□□ -0.09
RBM39-202ENST00000338163 A0A1W2PP64 1363 aa14.49□□□□□ -0.09
RBM39-202ENST00000338163 TERF1P54274 439 aa14.49□□□□□ -0.09
RBM39-202ENST00000338163 PLEKHM2Q8IWE5 1019 aa14.49□□□□□ -0.09
RBM39-202ENST00000338163 OTUD7AQ8TE49 926 aaPredicted RBP14.49□□□□□ -0.09
RBM39-202ENST00000338163 PDLIM2Q96JY6 352 aa14.49□□□□□ -0.09
RBM39-202ENST00000338163 NOL8Q76FK4 1167 aaKnown RBP14.49□□□□□ -0.09
RBM39-202ENST00000338163 NSFL1CQ9UNZ2 370 aaKnown RBP14.49□□□□□ -0.09
RBM39-202ENST00000338163 CSPP1Q1MSJ5 1256 aa14.48□□□□□ -0.09
RBM39-202ENST00000338163 INTS3Q68E01 1043 aaKnown RBP14.48□□□□□ -0.09
RBM39-202ENST00000338163 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.48□□□□□ -0.09
RBM39-202ENST00000338163 MRPL50Q8N5N7 158 aaKnown RBP14.48□□□□□ -0.09
RBM39-202ENST00000338163 USP26Q9BXU7 913 aa14.48□□□□□ -0.09
RBM39-202ENST00000338163 FYB1O15117 783 aa14.47□□□□□ -0.09
RBM39-202ENST00000338163 VAMP4O75379 141 aa14.47□□□□□ -0.09
RBM39-202ENST00000338163 CCDC39Q9UFE4 941 aa14.47□□□□□ -0.09
RBM39-202ENST00000338163 PRR36Q9H6K5 1346 aa14.47□□□□□ -0.09
RBM39-202ENST00000338163 CYP2E1P05181 493 aaPredicted RBP14.47□□□□□ -0.09
RBM39-202ENST00000338163 TTC22Q5TAA0 569 aa14.47□□□□□ -0.09
RBM39-202ENST00000338163 CASC1Q6TDU7 716 aa14.47□□□□□ -0.09
RBM39-202ENST00000338163 LRSAM1Q6UWE0 723 aa14.47□□□□□ -0.09
RBM39-202ENST00000338163 C19orf44Q9H6X5 657 aa14.46□□□□□ -0.09
RBM39-202ENST00000338163 CCDC61Q9Y6R9 512 aa14.46□□□□□ -0.09
RBM39-202ENST00000338163 SMARCA5O60264 1052 aaPredicted RBP14.46□□□□□ -0.09
RBM39-202ENST00000338163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.46□□□□□ -0.09
RBM39-202ENST00000338163 CWC22Q9HCG8 908 aaKnown RBP14.46□□□□□ -0.09
RBM39-202ENST00000338163 TWISTNBQ3B726 338 aaPredicted RBP14.45□□□□□ -0.1
RBM39-202ENST00000338163 PHACTR3Q96KR7 559 aa14.45□□□□□ -0.1
RBM39-202ENST00000338163 PUS7Q96PZ0 661 aaKnown RBP14.45□□□□□ -0.1
RBM39-202ENST00000338163 ZDHHC9Q9Y397 364 aa14.45□□□□□ -0.1
RBM39-202ENST00000338163 DYNC1I1O14576 645 aa14.45□□□□□ -0.1
RBM39-202ENST00000338163 ATF3P18847 181 aa14.45□□□□□ -0.1
RBM39-202ENST00000338163 NWD1Q149M9 1564 aa14.45□□□□□ -0.1
RBM39-202ENST00000338163 ADGRL3Q9HAR2 1447 aa14.45□□□□□ -0.1
RBM39-202ENST00000338163 TERF2IPQ9NYB0 399 aa14.45□□□□□ -0.1
RBM39-202ENST00000338163 SDSP20132 328 aa14.45□□□□□ -0.1
RBM39-202ENST00000338163 SASS6Q6UVJ0 657 aa14.45□□□□□ -0.1
RBM39-202ENST00000338163 PRDM4Q9UKN5 801 aa14.45□□□□□ -0.1
RBM39-202ENST00000338163 STRCP1A6NGW2 1772 aa14.44□□□□□ -0.1
RBM39-202ENST00000338163 JARID2Q92833 1246 aaPredicted RBP14.44□□□□□ -0.1
RBM39-202ENST00000338163 TSC1Q92574 1164 aa14.44□□□□□ -0.1
RBM39-202ENST00000338163 MBIPQ9NS73 344 aa14.44□□□□□ -0.1
RBM39-202ENST00000338163 ZHX1Q9UKY1 873 aaPredicted RBP14.44□□□□□ -0.1
RBM39-202ENST00000338163 FCHSD2O94868 740 aa14.43□□□□□ -0.1
RBM39-202ENST00000338163 NEK4P51957 841 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms