RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTPRB-202ENST00000334414 AKNAQ7Z591 1439 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 MNAT1P51948 309 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 AIMP1Q12904 312 aaKnown RBP6.44□□□□□ -1.38
PTPRB-202ENST00000334414 PLPPR3Q6T4P5 718 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 FHOD3Q2V2M9 1422 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 TDO2P48775 406 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 NEK4P51957 841 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 TAX1BP1Q86VP1 789 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 CCDC38Q502W7 563 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 ZFYVE27Q5T4F4 411 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 ME1P48163 572 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 SENP3-EIF4A1A0A087X0R7 540 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 MEX3CQ5U5Q3 659 aaKnown RBP6.44□□□□□ -1.38
PTPRB-202ENST00000334414 DAAM2Q86T65 1068 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 VPS37DQ86XT2 251 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 PLIN1O60240 522 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 A0A1B0GUL7 405 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 SARNPP82979 210 aaKnown RBP6.44□□□□□ -1.38
PTPRB-202ENST00000334414 CCDC30Q5VVM6 783 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 TEFQ10587 303 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 TTC31Q49AM3 519 aaPredicted RBP6.44□□□□□ -1.38
PTPRB-202ENST00000334414 FMNL2Q96PY5 1086 aa6.44□□□□□ -1.38
PTPRB-202ENST00000334414 C11orf95C9JLR9 678 aaPredicted RBP6.43□□□□□ -1.38
PTPRB-202ENST00000334414 FKBP15Q5T1M5 1219 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 STX1AQ16623 288 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 KLHL40Q2TBA0 621 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 RASSF4Q9H2L5 321 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 EID1Q9Y6B2 187 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 GABPB1Q06547 395 aaPredicted RBP6.43□□□□□ -1.38
PTPRB-202ENST00000334414 FSD1Q9BTV5 496 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 EIF2AK4Q9P2K8 1649 aaKnown RBP6.43□□□□□ -1.38
PTPRB-202ENST00000334414 CLGNO14967 610 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 YEATS4O95619 227 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 FOXD4L6Q3SYB3 417 aaPredicted RBP6.43□□□□□ -1.38
PTPRB-202ENST00000334414 FOXD4L3Q6VB84 417 aaPredicted RBP6.43□□□□□ -1.38
PTPRB-202ENST00000334414 CTAGE1Q96RT6 745 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 HSF2BPO75031 334 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 IFFO1Q0D2I5 559 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 FKBP5Q13451 457 aaPredicted RBP6.43□□□□□ -1.38
PTPRB-202ENST00000334414 FBF1Q8TES7 1133 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 ST20-MTHFSA0A0A6YYL1 179 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 TUBB2AQ13885 445 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 SH2D4BQ5SQS7 431 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 SPATS2Q86XZ4 545 aaKnown RBP6.43□□□□□ -1.38
PTPRB-202ENST00000334414 TUBB2BQ9BVA1 445 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 ANKRD62A6NC57 917 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 KRT18P05783 430 aaKnown RBP6.43□□□□□ -1.38
PTPRB-202ENST00000334414 RIPK4P57078 832 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 WDR63Q8IWG1 891 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 NACAP1Q9BZK3 213 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 FIBPO43427 364 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 SEPT11Q9NVA2 429 aaKnown RBP6.43□□□□□ -1.38
PTPRB-202ENST00000334414 CBX1P83916 185 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 KANK4Q5T7N3 995 aaPredicted RBP6.43□□□□□ -1.38
PTPRB-202ENST00000334414 GPATCH11Q8N954 259 aa6.43□□□□□ -1.38
PTPRB-202ENST00000334414 RPGRIP1LQ68CZ1 1315 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 ZMYND15Q9H091 742 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 OGFRQ9NZT2 677 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 RASAL2Q9UJF2 1139 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 NOL3O60936 208 aaKnown RBP6.42□□□□□ -1.38
PTPRB-202ENST00000334414 CTNNA3Q9UI47 895 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 PRPHP41219 470 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 PIP4K2BP78356 416 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 CEP128Q6ZU80 1094 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 LRRFIP2Q9Y608 721 aaKnown RBP6.42□□□□□ -1.38
PTPRB-202ENST00000334414 TICAM2Q86XR7 235 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 MPHOSPH10O00566 681 aaKnown RBP6.42□□□□□ -1.38
PTPRB-202ENST00000334414 KANK3Q6NY19 840 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 BMP2KQ9NSY1 1161 aaPredicted RBP6.42□□□□□ -1.38
PTPRB-202ENST00000334414 PLVAPQ9BX97 442 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 ABCC11Q96J66 1382 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 LARP1BQ659C4 914 aaKnown RBP6.42□□□□□ -1.38
PTPRB-202ENST00000334414 FMNL3Q8IVF7 1028 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 RNF168Q8IYW5 571 aaPredicted RBP6.42□□□□□ -1.38
PTPRB-202ENST00000334414 ARFGAP3Q9NP61 516 aa6.42□□□□□ -1.38
PTPRB-202ENST00000334414 CCDC172P0C7W6 258 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 TNNT1P13805 278 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 TSG101Q99816 390 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 FAM114A2Q9NRY5 505 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 NCOA2Q15596 1464 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 GNAI2P04899 355 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 MVPQ14764 893 aaKnown RBP6.41□□□□□ -1.38
PTPRB-202ENST00000334414 TTC12Q9H892 705 aaPredicted RBP6.41□□□□□ -1.38
PTPRB-202ENST00000334414 TOP1P11387 765 aaKnown RBP6.41□□□□□ -1.38
PTPRB-202ENST00000334414 HMGB2P26583 209 aaKnown RBP6.41□□□□□ -1.38
PTPRB-202ENST00000334414 B4GALNT4Q76KP1 1039 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 SYCE3A1L190 88 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 GBP6Q6ZN66 633 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 RALGAPBQ86X10 1494 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 MAP3K1Q13233 1512 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 ZFYP08048 801 aaPredicted RBP6.41□□□□□ -1.38
PTPRB-202ENST00000334414 PAFAH1B1P43034 410 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 FAM135AQ9P2D6 1515 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 SNW1Q13573 536 aaKnown RBP6.41□□□□□ -1.38
PTPRB-202ENST00000334414 KIF5BP33176 963 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 CLUL1Q15846 466 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 CEP135Q66GS9 1140 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 CHD1LQ86WJ1 897 aa6.41□□□□□ -1.38
PTPRB-202ENST00000334414 CUL7Q14999 1698 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms