RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 V9GYY5 206 aaPredicted RBP14.37□□□□□ -0.11
LIMK2-202ENST00000333611 VAMP4O75379 141 aa14.37□□□□□ -0.11
LIMK2-202ENST00000333611 SNX21Q969T3 373 aa14.37□□□□□ -0.11
LIMK2-202ENST00000333611 ABCC11Q96J66 1382 aa14.37□□□□□ -0.11
LIMK2-202ENST00000333611 SBNO2Q9Y2G9 1366 aa14.37□□□□□ -0.11
LIMK2-202ENST00000333611 SIRT2Q8IXJ6 389 aa14.36□□□□□ -0.11
LIMK2-202ENST00000333611 DRC7Q8IY82 874 aa14.36□□□□□ -0.11
LIMK2-202ENST00000333611 KIF2CQ99661 725 aa14.36□□□□□ -0.11
LIMK2-202ENST00000333611 NPATQ14207 1427 aa14.36□□□□□ -0.11
LIMK2-202ENST00000333611 TET3O43151 1660 aa14.36□□□□□ -0.11
LIMK2-202ENST00000333611 NME9Q86XW9 330 aa14.36□□□□□ -0.11
LIMK2-202ENST00000333611 ZGPATQ8N5A5 531 aaKnown RBP14.36□□□□□ -0.11
LIMK2-202ENST00000333611 MRPL50Q8N5N7 158 aaKnown RBP14.36□□□□□ -0.11
LIMK2-202ENST00000333611 NECTIN2Q92692 538 aa14.36□□□□□ -0.11
LIMK2-202ENST00000333611 MYOM2P54296 1465 aa14.35□□□□□ -0.11
LIMK2-202ENST00000333611 FCHSD2O94868 740 aa14.35□□□□□ -0.11
LIMK2-202ENST00000333611 GNAI1P63096 354 aa14.35□□□□□ -0.11
LIMK2-202ENST00000333611 MIS18AQ9NYP9 233 aa14.35□□□□□ -0.11
LIMK2-202ENST00000333611 CIZ1Q9ULV3 898 aaPredicted RBP14.35□□□□□ -0.11
LIMK2-202ENST00000333611 NFE2L2Q16236 605 aa14.35□□□□□ -0.11
LIMK2-202ENST00000333611 ALDH1L2Q3SY69 923 aa14.35□□□□□ -0.11
LIMK2-202ENST00000333611 FBXO31Q5XUX0 539 aaPredicted RBP14.35□□□□□ -0.11
LIMK2-202ENST00000333611 GDPD2Q9HCC8 539 aa14.35□□□□□ -0.11
LIMK2-202ENST00000333611 TOMM22Q9NS69 142 aa14.35□□□□□ -0.11
LIMK2-202ENST00000333611 VIRMAQ69YN4 1812 aaKnown RBP14.35□□□□□ -0.11
LIMK2-202ENST00000333611 NCKAP5LQ9HCH0 1330 aa14.35□□□□□ -0.11
LIMK2-202ENST00000333611 PPIP5K1Q6PFW1 1433 aa14.35□□□□□ -0.11
LIMK2-202ENST00000333611 GSPT1P15170 499 aaKnown RBP14.34□□□□□ -0.11
LIMK2-202ENST00000333611 CASC1Q6TDU7 716 aa14.34□□□□□ -0.11
LIMK2-202ENST00000333611 DNAJC2Q99543 621 aaKnown RBP14.34□□□□□ -0.11
LIMK2-202ENST00000333611 POLKQ9UBT6 870 aa14.34□□□□□ -0.11
LIMK2-202ENST00000333611 KIF1BO60333 1816 aa14.34□□□□□ -0.11
LIMK2-202ENST00000333611 PLPPR3Q6T4P5 718 aa14.34□□□□□ -0.11
LIMK2-202ENST00000333611 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
LIMK2-202ENST00000333611 SHPRHQ149N8 1683 aa14.33□□□□□ -0.11
LIMK2-202ENST00000333611 GPATCH11Q8N954 259 aa14.32□□□□□ -0.12
LIMK2-202ENST00000333611 SHROOM2Q13796 1616 aa14.32□□□□□ -0.12
LIMK2-202ENST00000333611 TNNT1P13805 278 aa14.32□□□□□ -0.12
LIMK2-202ENST00000333611 GTF2F1P35269 517 aaKnown RBP eCLIP14.32□□□□□ -0.12
LIMK2-202ENST00000333611 MCM10Q7L590 875 aa14.32□□□□□ -0.12
LIMK2-202ENST00000333611 API5Q9BZZ5 524 aaKnown RBP14.32□□□□□ -0.12
LIMK2-202ENST00000333611 NAA30Q147X3 362 aaPredicted RBP14.32□□□□□ -0.12
LIMK2-202ENST00000333611 NSD2O96028 1365 aa14.32□□□□□ -0.12
LIMK2-202ENST00000333611 IL16Q14005 1332 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 ST18O60284 1047 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 PLEKHM2Q8IWE5 1019 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 TSPY26PQ9H489 355 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 DIAPH3Q9NSV4 1193 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 RILPL2Q969X0 211 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 IFT57Q9NWB7 429 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 CHMP3Q9Y3E7 222 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 AK9Q5TCS8 1911 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 MROH2AA6NES4 1674 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 QRICH2Q9H0J4 1663 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 RPGRIP1LQ68CZ1 1315 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 NEK4P51957 841 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 RABEP1Q15276 862 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 INTS3Q68E01 1043 aaKnown RBP14.31□□□□□ -0.12
LIMK2-202ENST00000333611 PRIMPOLQ96LW4 560 aa14.31□□□□□ -0.12
LIMK2-202ENST00000333611 C16orf45Q96MC5 204 aaPredicted RBP14.31□□□□□ -0.12
LIMK2-202ENST00000333611 ZMYM3Q14202 1370 aa14.3□□□□□ -0.12
LIMK2-202ENST00000333611 F6X3S4 739 aa14.3□□□□□ -0.12
LIMK2-202ENST00000333611 DTNBO60941 627 aa14.3□□□□□ -0.12
LIMK2-202ENST00000333611 HS1BP3Q53T59 392 aa14.3□□□□□ -0.12
LIMK2-202ENST00000333611 RTF1Q92541 710 aaKnown RBP14.3□□□□□ -0.12
LIMK2-202ENST00000333611 SDSP20132 328 aa14.29□□□□□ -0.12
LIMK2-202ENST00000333611 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
LIMK2-202ENST00000333611 TMEM63CQ9P1W3 806 aa14.29□□□□□ -0.12
LIMK2-202ENST00000333611 NUCB2P80303 420 aa14.29□□□□□ -0.12
LIMK2-202ENST00000333611 SULT6B1Q6IMI4 303 aa14.29□□□□□ -0.12
LIMK2-202ENST00000333611 MEIS3Q99687 375 aa14.29□□□□□ -0.12
LIMK2-202ENST00000333611 EXOC6BQ9Y2D4 811 aa14.29□□□□□ -0.12
LIMK2-202ENST00000333611 PATL2C9JE40 543 aaKnown RBP14.28□□□□□ -0.12
LIMK2-202ENST00000333611 DDIT3P35638 169 aa14.28□□□□□ -0.12
LIMK2-202ENST00000333611 TTC22Q5TAA0 569 aa14.28□□□□□ -0.12
LIMK2-202ENST00000333611 NSFL1CQ9UNZ2 370 aaKnown RBP14.28□□□□□ -0.12
LIMK2-202ENST00000333611 MCM5P33992 734 aa14.28□□□□□ -0.12
LIMK2-202ENST00000333611 COG3Q96JB2 828 aa14.28□□□□□ -0.12
LIMK2-202ENST00000333611 EFCAB6Q5THR3 1501 aa14.28□□□□□ -0.12
LIMK2-202ENST00000333611 ASXL2Q76L83 1435 aa14.28□□□□□ -0.12
LIMK2-202ENST00000333611 TULP4Q9NRJ4 1543 aa14.28□□□□□ -0.12
LIMK2-202ENST00000333611 TXNDC2Q86VQ3 553 aa14.28□□□□□ -0.12
LIMK2-202ENST00000333611 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.28□□□□□ -0.12
LIMK2-202ENST00000333611 ADCY5O95622 1261 aa14.27□□□□□ -0.12
LIMK2-202ENST00000333611 ANO2Q9NQ90 1003 aa14.27□□□□□ -0.12
LIMK2-202ENST00000333611 PPRC1Q5VV67 1664 aaKnown RBP14.27□□□□□ -0.13
LIMK2-202ENST00000333611 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
LIMK2-202ENST00000333611 LRSAM1Q6UWE0 723 aa14.27□□□□□ -0.13
LIMK2-202ENST00000333611 LARP6Q9BRS8 491 aaKnown RBP14.26□□□□□ -0.13
LIMK2-202ENST00000333611 UPF3BQ9BZI7 483 aaKnown RBP14.26□□□□□ -0.13
LIMK2-202ENST00000333611 POLR3GO15318 223 aaPredicted RBP14.25□□□□□ -0.13
LIMK2-202ENST00000333611 ZNF445P59923 1031 aa14.25□□□□□ -0.13
LIMK2-202ENST00000333611 USP26Q9BXU7 913 aa14.25□□□□□ -0.13
LIMK2-202ENST00000333611 HCLS1P14317 486 aaPredicted RBP14.25□□□□□ -0.13
LIMK2-202ENST00000333611 GPT2Q8TD30 523 aa14.25□□□□□ -0.13
LIMK2-202ENST00000333611 ST7Q9NRC1 585 aa14.25□□□□□ -0.13
LIMK2-202ENST00000333611 LMBRD1Q9NUN5 540 aa14.25□□□□□ -0.13
LIMK2-202ENST00000333611 CALCOCO1Q9P1Z2 691 aa14.25□□□□□ -0.13
LIMK2-202ENST00000333611 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
LIMK2-202ENST00000333611 LMOD3Q0VAK6 560 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms