RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 DIAPH1O60610 1272 aaKnown RBP22.08■■□□□ 1.13
C11orf88-201ENST00000332814 APBA3O96018 575 aa22.08■■□□□ 1.13
C11orf88-201ENST00000332814 SPG7Q9UQ90 795 aa22.08■■□□□ 1.13
C11orf88-201ENST00000332814 TNS1Q9HBL0 1735 aaKnown RBP22.07■■□□□ 1.12
C11orf88-201ENST00000332814 IL13P35225 146 aa22.06■■□□□ 1.12
C11orf88-201ENST00000332814 PPP2R1AP30153 589 aa22.05■■□□□ 1.12
C11orf88-201ENST00000332814 BCL11BQ9C0K0 894 aaPredicted RBP22.05■■□□□ 1.12
C11orf88-201ENST00000332814 EN1Q05925 392 aaPredicted RBP22.04■■□□□ 1.12
C11orf88-201ENST00000332814 ACSBG1Q96GR2 724 aa22.04■■□□□ 1.12
C11orf88-201ENST00000332814 ZNF316A6NFI3 1004 aaPredicted RBP22.03■■□□□ 1.12
C11orf88-201ENST00000332814 SULT6B1Q6IMI4 303 aa22.03■■□□□ 1.12
C11orf88-201ENST00000332814 PLEKHG2Q9H7P9 1386 aa22.02■■□□□ 1.12
C11orf88-201ENST00000332814 PARD3Q8TEW0 1356 aa22.01■■□□□ 1.11
C11orf88-201ENST00000332814 U2SURPO15042 1029 aaKnown RBP22.01■■□□□ 1.11
C11orf88-201ENST00000332814 SYTL4Q96C24 671 aaPredicted RBP22.01■■□□□ 1.11
C11orf88-201ENST00000332814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.01■■□□□ 1.11
C11orf88-201ENST00000332814 EP400Q96L91 3159 aa22.01■■□□□ 1.11
C11orf88-201ENST00000332814 PKD1L3Q7Z443 1732 aa22■■□□□ 1.11
C11orf88-201ENST00000332814 SHANK3Q9BYB0 1731 aa22■■□□□ 1.11
C11orf88-201ENST00000332814 RALBP1Q15311 655 aa22■■□□□ 1.11
C11orf88-201ENST00000332814 PLEKHO1Q53GL0 409 aaPredicted RBP22■■□□□ 1.11
C11orf88-201ENST00000332814 AEBP1Q8IUX7 1158 aa22■■□□□ 1.11
C11orf88-201ENST00000332814 NUDCQ9Y266 331 aa22■■□□□ 1.11
C11orf88-201ENST00000332814 NHSQ6T4R5 1651 aa22■■□□□ 1.11
C11orf88-201ENST00000332814 COL3A1P02461 1466 aaPredicted RBP21.99■■□□□ 1.11
C11orf88-201ENST00000332814 SBF2Q86WG5 1849 aa21.99■■□□□ 1.11
C11orf88-201ENST00000332814 KCNQ2O43526 872 aa21.98■■□□□ 1.11
C11orf88-201ENST00000332814 HMOX1P09601 288 aa21.98■■□□□ 1.11
C11orf88-201ENST00000332814 EZH2Q15910 746 aaKnown RBP21.98■■□□□ 1.11
C11orf88-201ENST00000332814 AMOTQ4VCS5 1084 aa21.98■■□□□ 1.11
C11orf88-201ENST00000332814 KDRP35968 1356 aa21.98■■□□□ 1.11
C11orf88-201ENST00000332814 IFNL2Q8IZJ0 200 aa21.97■■□□□ 1.11
C11orf88-201ENST00000332814 CYP27B1O15528 508 aa21.96■■□□□ 1.11
C11orf88-201ENST00000332814 CAMKK2Q96RR4 588 aa21.96■■□□□ 1.11
C11orf88-201ENST00000332814 DOT1LQ8TEK3 1739 aa21.96■■□□□ 1.11
C11orf88-201ENST00000332814 PTF1AQ7RTS3 328 aa21.95■■□□□ 1.1
C11orf88-201ENST00000332814 PLSCR1O15162 318 aa21.94■■□□□ 1.1
C11orf88-201ENST00000332814 PRIM1P49642 420 aaKnown RBP21.94■■□□□ 1.1
C11orf88-201ENST00000332814 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
C11orf88-201ENST00000332814 ZNF530Q6P9A1 599 aaPredicted RBP21.94■■□□□ 1.1
C11orf88-201ENST00000332814 HSP90AB1P08238 724 aaKnown RBP21.93■■□□□ 1.1
C11orf88-201ENST00000332814 PHKG2P15735 406 aa21.93■■□□□ 1.1
C11orf88-201ENST00000332814 RGPD3A6NKT7 1758 aaPredicted RBP21.92■■□□□ 1.1
C11orf88-201ENST00000332814 RGPD4Q7Z3J3 1758 aa21.92■■□□□ 1.1
C11orf88-201ENST00000332814 MYBBP1AQ9BQG0 1328 aaKnown RBP21.91■■□□□ 1.1
C11orf88-201ENST00000332814 U2AF1L5P0DN76 240 aaPredicted RBP21.91■■□□□ 1.1
C11orf88-201ENST00000332814 U2AF1Q01081 240 aaKnown RBP eCLIP21.91■■□□□ 1.1
C11orf88-201ENST00000332814 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
C11orf88-201ENST00000332814 NBPF14Q5TI25 921 aa21.89■■□□□ 1.09
C11orf88-201ENST00000332814 BTAF1O14981 1849 aa21.89■■□□□ 1.09
C11orf88-201ENST00000332814 RREB1Q92766 1687 aa21.88■■□□□ 1.09
C11orf88-201ENST00000332814 MPRIPQ6WCQ1 1025 aa21.88■■□□□ 1.09
C11orf88-201ENST00000332814 TXNRD1Q16881 649 aa21.87■■□□□ 1.09
C11orf88-201ENST00000332814 DCAF5Q96JK2 942 aa21.87■■□□□ 1.09
C11orf88-201ENST00000332814 TMOD3Q9NYL9 352 aa21.87■■□□□ 1.09
C11orf88-201ENST00000332814 NEFMP07197 916 aa21.85■■□□□ 1.09
C11orf88-201ENST00000332814 PRKRIP1Q9H875 184 aaPredicted RBP21.85■■□□□ 1.09
C11orf88-201ENST00000332814 NUP188Q5SRE5 1749 aa21.85■■□□□ 1.09
C11orf88-201ENST00000332814 TOGARAM1Q9Y4F4 1720 aa21.84■■□□□ 1.09
C11orf88-201ENST00000332814 PRKAR2BP31323 418 aa21.84■■□□□ 1.09
C11orf88-201ENST00000332814 AKAP4Q5JQC9 854 aa21.84■■□□□ 1.09
C11orf88-201ENST00000332814 GAS2L2Q8NHY3 880 aa21.84■■□□□ 1.09
C11orf88-201ENST00000332814 KAT6BQ8WYB5 2073 aa21.84■■□□□ 1.09
C11orf88-201ENST00000332814 FCHSD2O94868 740 aa21.82■■□□□ 1.08
C11orf88-201ENST00000332814 MTHFSDQ2M296 383 aaKnown RBP21.82■■□□□ 1.08
C11orf88-201ENST00000332814 SMARCC1Q92922 1105 aaPredicted RBP21.82■■□□□ 1.08
C11orf88-201ENST00000332814 RSPH6AQ9H0K4 717 aa21.82■■□□□ 1.08
C11orf88-201ENST00000332814 PSDA5PKW4 1024 aaPredicted RBP21.81■■□□□ 1.08
C11orf88-201ENST00000332814 ERVV-2B6SEH9 535 aa21.81■■□□□ 1.08
C11orf88-201ENST00000332814 CABP4P57796 275 aa21.81■■□□□ 1.08
C11orf88-201ENST00000332814 KDM6AO15550 1401 aaPredicted RBP21.8■■□□□ 1.08
C11orf88-201ENST00000332814 PALLDQ8WX93 1383 aa21.8■■□□□ 1.08
C11orf88-201ENST00000332814 R3HDM1Q15032 1099 aaKnown RBP21.8■■□□□ 1.08
C11orf88-201ENST00000332814 SLC27A3Q5K4L6 730 aa21.8■■□□□ 1.08
C11orf88-201ENST00000332814 PROM2Q8N271 834 aa21.8■■□□□ 1.08
C11orf88-201ENST00000332814 PIGBQ92521 554 aa21.8■■□□□ 1.08
C11orf88-201ENST00000332814 PNNQ9H307 717 aaKnown RBP21.8■■□□□ 1.08
C11orf88-201ENST00000332814 STK32BQ9NY57 414 aa21.8■■□□□ 1.08
C11orf88-201ENST00000332814 ANP32CO43423 234 aa21.79■■□□□ 1.08
C11orf88-201ENST00000332814 CCNL1Q9UK58 526 aaPredicted RBP21.79■■□□□ 1.08
C11orf88-201ENST00000332814 HMGB2P26583 209 aaKnown RBP21.78■■□□□ 1.08
C11orf88-201ENST00000332814 MAP3K5Q99683 1374 aa21.77■■□□□ 1.08
C11orf88-201ENST00000332814 WDR43Q15061 677 aaKnown RBP eCLIP21.77■■□□□ 1.08
C11orf88-201ENST00000332814 ITGB4P16144 1822 aa21.77■■□□□ 1.08
C11orf88-201ENST00000332814 MAPK8IP3Q9UPT6 1336 aa21.77■■□□□ 1.07
C11orf88-201ENST00000332814 GNAT3A8MTJ3 354 aa21.75■■□□□ 1.07
C11orf88-201ENST00000332814 RNMTO43148 476 aaKnown RBP21.74■■□□□ 1.07
C11orf88-201ENST00000332814 PHACTR3Q96KR7 559 aa21.74■■□□□ 1.07
C11orf88-201ENST00000332814 ANO8Q9HCE9 1232 aaPredicted RBP21.74■■□□□ 1.07
C11orf88-201ENST00000332814 LY75O60449 1722 aa21.74■■□□□ 1.07
C11orf88-201ENST00000332814 LRRC4BQ9NT99 713 aa21.73■■□□□ 1.07
C11orf88-201ENST00000332814 KCNQ4P56696 695 aa21.72■■□□□ 1.07
C11orf88-201ENST00000332814 SLC15A2Q16348 729 aa21.72■■□□□ 1.07
C11orf88-201ENST00000332814 NFATC2IPQ8NCF5 419 aa21.72■■□□□ 1.07
C11orf88-201ENST00000332814 RTF1Q92541 710 aaKnown RBP21.72■■□□□ 1.07
C11orf88-201ENST00000332814 SLC52A2Q9HAB3 445 aa21.72■■□□□ 1.07
C11orf88-201ENST00000332814 LGR6Q9HBX8 967 aa21.72■■□□□ 1.07
C11orf88-201ENST00000332814 ASAP1Q9ULH1 1129 aa21.72■■□□□ 1.07
C11orf88-201ENST00000332814 TEFQ10587 303 aa21.71■■□□□ 1.07
C11orf88-201ENST00000332814 ATG3Q9NT62 314 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms