RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 TOM1L2Q6ZVM7 507 aa12.45□□□□□ -0.42
C11orf54-201ENST00000331239 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
C11orf54-201ENST00000331239 WDR63Q8IWG1 891 aa12.45□□□□□ -0.42
C11orf54-201ENST00000331239 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
C11orf54-201ENST00000331239 RAPGEF4Q8WZA2 1011 aa12.45□□□□□ -0.42
C11orf54-201ENST00000331239 NGLY1Q96IV0 654 aa12.45□□□□□ -0.42
C11orf54-201ENST00000331239 IL16Q14005 1332 aa12.44□□□□□ -0.42
C11orf54-201ENST00000331239 LTV1Q96GA3 475 aaPredicted RBP12.44□□□□□ -0.42
C11orf54-201ENST00000331239 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
C11orf54-201ENST00000331239 SPATA31A5Q5VU36 1347 aa12.44□□□□□ -0.42
C11orf54-201ENST00000331239 SPATA31A7Q8IWB4 1347 aa12.44□□□□□ -0.42
C11orf54-201ENST00000331239 ADAMTS2O95450 1211 aa12.44□□□□□ -0.42
C11orf54-201ENST00000331239 TMPOP42166 694 aaKnown RBP12.44□□□□□ -0.42
C11orf54-201ENST00000331239 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
C11orf54-201ENST00000331239 SPATA31A1Q5TZJ5 1347 aa12.43□□□□□ -0.42
C11orf54-201ENST00000331239 DISP2A7MBM2 1401 aa12.43□□□□□ -0.42
C11orf54-201ENST00000331239 ZNF521Q96K83 1311 aa12.43□□□□□ -0.42
C11orf54-201ENST00000331239 HSP90AB1P08238 724 aaKnown RBP12.43□□□□□ -0.42
C11orf54-201ENST00000331239 HMOX1P09601 288 aa12.43□□□□□ -0.42
C11orf54-201ENST00000331239 IL2RBP14784 551 aa12.43□□□□□ -0.42
C11orf54-201ENST00000331239 BABAM1Q9NWV8 329 aa12.43□□□□□ -0.42
C11orf54-201ENST00000331239 ATRNO75882 1429 aa12.42□□□□□ -0.42
C11orf54-201ENST00000331239 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
C11orf54-201ENST00000331239 APAF1O14727 1248 aa12.42□□□□□ -0.42
C11orf54-201ENST00000331239 ERICH6BQ5W0A0 696 aa12.42□□□□□ -0.42
C11orf54-201ENST00000331239 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
C11orf54-201ENST00000331239 DLG5Q8TDM6 1919 aa12.42□□□□□ -0.42
C11orf54-201ENST00000331239 LARP1Q6PKG0 1096 aaKnown RBP12.42□□□□□ -0.42
C11orf54-201ENST00000331239 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
C11orf54-201ENST00000331239 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
C11orf54-201ENST00000331239 AKAP4Q5JQC9 854 aa12.41□□□□□ -0.42
C11orf54-201ENST00000331239 ZNF772Q68DY9 489 aaPredicted RBP12.41□□□□□ -0.42
C11orf54-201ENST00000331239 TRPC5Q9UL62 973 aaPredicted RBP12.41□□□□□ -0.42
C11orf54-201ENST00000331239 USP21Q9UK80 565 aa12.41□□□□□ -0.42
C11orf54-201ENST00000331239 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
C11orf54-201ENST00000331239 IRX6P78412 446 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-201ENST00000331239 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
C11orf54-201ENST00000331239 C8orf37Q96NL8 207 aa12.4□□□□□ -0.42
C11orf54-201ENST00000331239 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-201ENST00000331239 RIPK4P57078 832 aa12.4□□□□□ -0.42
C11orf54-201ENST00000331239 CCDC146Q8IYE0 955 aa12.4□□□□□ -0.42
C11orf54-201ENST00000331239 STRN4Q9NRL3 753 aa12.4□□□□□ -0.42
C11orf54-201ENST00000331239 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
C11orf54-201ENST00000331239 GNAT3A8MTJ3 354 aa12.39□□□□□ -0.43
C11orf54-201ENST00000331239 NKX1-1Q15270 411 aaPredicted RBP12.39□□□□□ -0.43
C11orf54-201ENST00000331239 PCDH11XQ9BZA7 1347 aa12.39□□□□□ -0.43
C11orf54-201ENST00000331239 PCDH11YQ9BZA8 1340 aa12.39□□□□□ -0.43
C11orf54-201ENST00000331239 MEGF6O75095 1541 aa12.39□□□□□ -0.43
C11orf54-201ENST00000331239 MTHFSDQ2M296 383 aaKnown RBP12.39□□□□□ -0.43
C11orf54-201ENST00000331239 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
C11orf54-201ENST00000331239 ZCRB1Q8TBF4 217 aaKnown RBP12.39□□□□□ -0.43
C11orf54-201ENST00000331239 AFF2P51816 1311 aa12.39□□□□□ -0.43
C11orf54-201ENST00000331239 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
C11orf54-201ENST00000331239 LRRC37A3O60309 1634 aa12.38□□□□□ -0.43
C11orf54-201ENST00000331239 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
C11orf54-201ENST00000331239 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
C11orf54-201ENST00000331239 C1orf141Q5JVX7 400 aa12.38□□□□□ -0.43
C11orf54-201ENST00000331239 TRIM35Q9UPQ4 493 aa12.38□□□□□ -0.43
C11orf54-201ENST00000331239 E9PSI1 815 aa12.37□□□□□ -0.43
C11orf54-201ENST00000331239 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
C11orf54-201ENST00000331239 CEMIPQ8WUJ3 1361 aa12.37□□□□□ -0.43
C11orf54-201ENST00000331239 TNS2Q63HR2 1409 aa12.37□□□□□ -0.43
C11orf54-201ENST00000331239 USHBP1Q8N6Y0 703 aa12.37□□□□□ -0.43
C11orf54-201ENST00000331239 BCL9O00512 1426 aa12.37□□□□□ -0.43
C11orf54-201ENST00000331239 SCN11AQ9UI33 1791 aa12.36□□□□□ -0.43
C11orf54-201ENST00000331239 TRMT2AQ8IZ69 625 aaKnown RBP12.36□□□□□ -0.43
C11orf54-201ENST00000331239 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
C11orf54-201ENST00000331239 SHANK3Q9BYB0 1731 aa12.36□□□□□ -0.43
C11orf54-201ENST00000331239 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
C11orf54-201ENST00000331239 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
C11orf54-201ENST00000331239 ZNF530Q6P9A1 599 aaPredicted RBP12.36□□□□□ -0.43
C11orf54-201ENST00000331239 DCAF5Q96JK2 942 aa12.36□□□□□ -0.43
C11orf54-201ENST00000331239 MYH16Q9H6N6 1097 aa12.36□□□□□ -0.43
C11orf54-201ENST00000331239 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
C11orf54-201ENST00000331239 EXOC5O00471 708 aa12.35□□□□□ -0.43
C11orf54-201ENST00000331239 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
C11orf54-201ENST00000331239 GNAI1P63096 354 aa12.35□□□□□ -0.43
C11orf54-201ENST00000331239 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
C11orf54-201ENST00000331239 VIRMAQ69YN4 1812 aaKnown RBP12.35□□□□□ -0.43
C11orf54-201ENST00000331239 MRC1P22897 1456 aa12.35□□□□□ -0.43
C11orf54-201ENST00000331239 PHKG2P15735 406 aa12.35□□□□□ -0.43
C11orf54-201ENST00000331239 ERVV-2B6SEH9 535 aa12.34□□□□□ -0.43
C11orf54-201ENST00000331239 CHMP4AQ9BY43 222 aa12.34□□□□□ -0.43
C11orf54-201ENST00000331239 GLI3P10071 1580 aa12.34□□□□□ -0.43
C11orf54-201ENST00000331239 SLFN5Q08AF3 891 aa12.34□□□□□ -0.43
C11orf54-201ENST00000331239 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
C11orf54-201ENST00000331239 SIPA1L3O60292 1781 aaPredicted RBP12.33□□□□□ -0.44
C11orf54-201ENST00000331239 ZNF853P0CG23 659 aa12.33□□□□□ -0.44
C11orf54-201ENST00000331239 RBM6P78332 1123 aaKnown RBP12.33□□□□□ -0.44
C11orf54-201ENST00000331239 QTRT2Q9H974 415 aaKnown RBP12.33□□□□□ -0.44
C11orf54-201ENST00000331239 DDB1Q16531 1140 aa12.32□□□□□ -0.44
C11orf54-201ENST00000331239 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
C11orf54-201ENST00000331239 RNMTO43148 476 aaKnown RBP12.32□□□□□ -0.44
C11orf54-201ENST00000331239 CYP27B1O15528 508 aa12.31□□□□□ -0.44
C11orf54-201ENST00000331239 TAF7Q15545 349 aaPredicted RBP12.31□□□□□ -0.44
C11orf54-201ENST00000331239 CCDC9Q9Y3X0 531 aaKnown RBP12.31□□□□□ -0.44
C11orf54-201ENST00000331239 CHL1O00533 1208 aa12.31□□□□□ -0.44
C11orf54-201ENST00000331239 IL17REQ8NFR9 667 aa12.3□□□□□ -0.44
C11orf54-201ENST00000331239 RRP7AQ9Y3A4 280 aaKnown RBP12.3□□□□□ -0.44
C11orf54-201ENST00000331239 NEUROD2Q15784 382 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms