RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 NCAPD2Q15021 1401 aa18.83■□□□□ 0.6
GTF3C6-201ENST00000329970 NBPF6Q5VWK0 638 aa18.82■□□□□ 0.6
GTF3C6-201ENST00000329970 CCER1Q8TC90 406 aaPredicted RBP18.82■□□□□ 0.6
GTF3C6-201ENST00000329970 NBPF4Q96M43 638 aa18.82■□□□□ 0.6
GTF3C6-201ENST00000329970 SLC15A2Q16348 729 aa18.81■□□□□ 0.6
GTF3C6-201ENST00000329970 ZCRB1Q8TBF4 217 aaKnown RBP18.81■□□□□ 0.6
GTF3C6-201ENST00000329970 HSP90AB2PQ58FF8 381 aa18.8■□□□□ 0.6
GTF3C6-201ENST00000329970 DDX54Q8TDD1 881 aaKnown RBP18.8■□□□□ 0.6
GTF3C6-201ENST00000329970 STK32BQ9NY57 414 aa18.8■□□□□ 0.6
GTF3C6-201ENST00000329970 HSPA5P11021 654 aaKnown RBP18.78■□□□□ 0.6
GTF3C6-201ENST00000329970 RAPGEF4Q8WZA2 1011 aa18.78■□□□□ 0.6
GTF3C6-201ENST00000329970 NSD2O96028 1365 aa18.78■□□□□ 0.6
GTF3C6-201ENST00000329970 SLC27A3Q5K4L6 730 aa18.77■□□□□ 0.6
GTF3C6-201ENST00000329970 COL24A1Q17RW2 1714 aa18.77■□□□□ 0.59
GTF3C6-201ENST00000329970 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
GTF3C6-201ENST00000329970 TATP17735 454 aaPredicted RBP18.76■□□□□ 0.59
GTF3C6-201ENST00000329970 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
GTF3C6-201ENST00000329970 ITGB4P16144 1822 aa18.76■□□□□ 0.59
GTF3C6-201ENST00000329970 TUBGCP6Q96RT7 1819 aa18.76■□□□□ 0.59
GTF3C6-201ENST00000329970 PLEKHG2Q9H7P9 1386 aa18.75■□□□□ 0.59
GTF3C6-201ENST00000329970 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
GTF3C6-201ENST00000329970 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
GTF3C6-201ENST00000329970 USHBP1Q8N6Y0 703 aa18.74■□□□□ 0.59
GTF3C6-201ENST00000329970 PRIM1P49642 420 aaKnown RBP18.73■□□□□ 0.59
GTF3C6-201ENST00000329970 PDGFDQ9GZP0 370 aaPredicted RBP18.73■□□□□ 0.59
GTF3C6-201ENST00000329970 LRRC4BQ9NT99 713 aa18.73■□□□□ 0.59
GTF3C6-201ENST00000329970 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
GTF3C6-201ENST00000329970 POLKQ9UBT6 870 aa18.72■□□□□ 0.59
GTF3C6-201ENST00000329970 PPP1R1BQ9UD71 204 aaPredicted RBP18.72■□□□□ 0.59
GTF3C6-201ENST00000329970 TAF1LQ8IZX4 1826 aa18.72■□□□□ 0.59
GTF3C6-201ENST00000329970 AKT1S1Q96B36 256 aa18.71■□□□□ 0.59
GTF3C6-201ENST00000329970 MTFR1LQ9H019 292 aa18.71■□□□□ 0.59
GTF3C6-201ENST00000329970 PTGER2P43116 358 aa18.7■□□□□ 0.58
GTF3C6-201ENST00000329970 C5P01031 1676 aa18.69■□□□□ 0.58
GTF3C6-201ENST00000329970 ZNF827Q17R98 1081 aa18.69■□□□□ 0.58
GTF3C6-201ENST00000329970 SYTL4Q96C24 671 aaPredicted RBP18.69■□□□□ 0.58
GTF3C6-201ENST00000329970 SGIP1Q9BQI5 828 aa18.69■□□□□ 0.58
GTF3C6-201ENST00000329970 POLR3GLQ9BT43 218 aa18.69■□□□□ 0.58
GTF3C6-201ENST00000329970 PANK3Q9H999 370 aa18.69■□□□□ 0.58
GTF3C6-201ENST00000329970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.69■□□□□ 0.589e-8■■■■□ 24.3
GTF3C6-201ENST00000329970 ZBTB7AO95365 584 aa18.68■□□□□ 0.58
GTF3C6-201ENST00000329970 HMGB2P26583 209 aaKnown RBP18.68■□□□□ 0.58
GTF3C6-201ENST00000329970 EYA1Q99502 592 aa18.68■□□□□ 0.58
GTF3C6-201ENST00000329970 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
GTF3C6-201ENST00000329970 CYP27B1O15528 508 aa18.67■□□□□ 0.58
GTF3C6-201ENST00000329970 NKX1-1Q15270 411 aaPredicted RBP18.67■□□□□ 0.58
GTF3C6-201ENST00000329970 SLC16A10Q8TF71 515 aa18.67■□□□□ 0.58
GTF3C6-201ENST00000329970 SPG7Q9UQ90 795 aa18.65■□□□□ 0.58
GTF3C6-201ENST00000329970 EIF4A2Q14240 407 aaKnown RBP18.64■□□□□ 0.57
GTF3C6-201ENST00000329970 ATF5Q9Y2D1 282 aaPredicted RBP18.64■□□□□ 0.57
GTF3C6-201ENST00000329970 MAP3K5Q99683 1374 aa18.64■□□□□ 0.57
GTF3C6-201ENST00000329970 CCNL1Q9UK58 526 aaPredicted RBP18.63■□□□□ 0.57
GTF3C6-201ENST00000329970 PNPLA7Q6ZV29 1317 aa18.63■□□□□ 0.57
GTF3C6-201ENST00000329970 IGSF1Q8N6C5 1336 aa18.63■□□□□ 0.57
GTF3C6-201ENST00000329970 PALLDQ8WX93 1383 aa18.61■□□□□ 0.57
GTF3C6-201ENST00000329970 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
GTF3C6-201ENST00000329970 DCAF8L1A6NGE4 600 aa18.6■□□□□ 0.57
GTF3C6-201ENST00000329970 TNNT2P45379 298 aaPredicted RBP18.6■□□□□ 0.57
GTF3C6-201ENST00000329970 SMARCC1Q92922 1105 aaPredicted RBP18.6■□□□□ 0.57
GTF3C6-201ENST00000329970 TFCP2L1Q9NZI6 479 aa18.6■□□□□ 0.57
GTF3C6-201ENST00000329970 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
GTF3C6-201ENST00000329970 UBR3Q6ZT12 1888 aa18.6■□□□□ 0.57
GTF3C6-201ENST00000329970 C4BP0C0L5 1744 aa18.6■□□□□ 0.57
GTF3C6-201ENST00000329970 ZNF831Q5JPB2 1677 aa18.6■□□□□ 0.57
GTF3C6-201ENST00000329970 IFNL2Q8IZJ0 200 aa18.59■□□□□ 0.57
GTF3C6-201ENST00000329970 ARXQ96QS3 562 aa18.59■□□□□ 0.57
GTF3C6-201ENST00000329970 CHD4Q14839 1912 aa18.59■□□□□ 0.57
GTF3C6-201ENST00000329970 PHKG2P15735 406 aa18.58■□□□□ 0.56
GTF3C6-201ENST00000329970 KCNQ4P56696 695 aa18.58■□□□□ 0.56
GTF3C6-201ENST00000329970 MPRIPQ6WCQ1 1025 aa18.58■□□□□ 0.56
GTF3C6-201ENST00000329970 MORC1Q86VD1 984 aa18.58■□□□□ 0.56
GTF3C6-201ENST00000329970 SYT17Q9BSW7 474 aa18.58■□□□□ 0.56
GTF3C6-201ENST00000329970 FHDC1Q9C0D6 1143 aaPredicted RBP18.58■□□□□ 0.56
GTF3C6-201ENST00000329970 AMER1Q5JTC6 1135 aaPredicted RBP18.57■□□□□ 0.56
GTF3C6-201ENST00000329970 PIGBQ92521 554 aa18.56■□□□□ 0.56
GTF3C6-201ENST00000329970 UTRNP46939 3433 aa18.55■□□□□ 0.56
GTF3C6-201ENST00000329970 KDRP35968 1356 aa18.55■□□□□ 0.56
GTF3C6-201ENST00000329970 POLD1P28340 1107 aa18.54■□□□□ 0.56
GTF3C6-201ENST00000329970 FLAD1Q8NFF5 587 aa18.54■□□□□ 0.56
GTF3C6-201ENST00000329970 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
GTF3C6-201ENST00000329970 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
GTF3C6-201ENST00000329970 TMOD3Q9NYL9 352 aa18.53■□□□□ 0.56
GTF3C6-201ENST00000329970 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
GTF3C6-201ENST00000329970 HSP90AB1P08238 724 aaKnown RBP18.52■□□□□ 0.56
GTF3C6-201ENST00000329970 PLEKHO1Q53GL0 409 aaPredicted RBP18.52■□□□□ 0.56
GTF3C6-201ENST00000329970 COL23A1Q86Y22 540 aaPredicted RBP18.52■□□□□ 0.56
GTF3C6-201ENST00000329970 SCN11AQ9UI33 1791 aa18.52■□□□□ 0.55
GTF3C6-201ENST00000329970 NPC1L1Q9UHC9 1359 aa18.52■□□□□ 0.55
GTF3C6-201ENST00000329970 ERVV-2B6SEH9 535 aa18.51■□□□□ 0.55
GTF3C6-201ENST00000329970 COL5A3P25940 1745 aaPredicted RBP18.51■□□□□ 0.55
GTF3C6-201ENST00000329970 LOC102724428A0A0B4J2F2 783 aa18.5■□□□□ 0.55
GTF3C6-201ENST00000329970 YY1P25490 414 aa18.5■□□□□ 0.55
GTF3C6-201ENST00000329970 IL13P35225 146 aa18.5■□□□□ 0.55
GTF3C6-201ENST00000329970 SIK1P57059 783 aa18.5■□□□□ 0.55
GTF3C6-201ENST00000329970 DCAF5Q96JK2 942 aa18.5■□□□□ 0.55
GTF3C6-201ENST00000329970 CICQ96RK0 1608 aaPredicted RBP18.49■□□□□ 0.55
GTF3C6-201ENST00000329970 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
GTF3C6-201ENST00000329970 AK7Q96M32 723 aa18.47■□□□□ 0.55
GTF3C6-201ENST00000329970 ATG3Q9NT62 314 aa18.47■□□□□ 0.55
GTF3C6-201ENST00000329970 ASAP1Q9ULH1 1129 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms