RNA–Protein interactions for RNA: ENST00000329559.7

NDUFB1-201, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 1 (best) BASIC

Gene NDUFB1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-201ENST00000329559 ZNF316A6NFI3 1004 aaPredicted RBP27.02■■□□□ 1.92
NDUFB1-201ENST00000329559 SHANK3Q9BYB0 1731 aa27.02■■□□□ 1.92
NDUFB1-201ENST00000329559 PTF1AQ7RTS3 328 aa27.01■■□□□ 1.91
NDUFB1-201ENST00000329559 PARD3Q8TEW0 1356 aa27■■□□□ 1.91
NDUFB1-201ENST00000329559 SBF2Q86WG5 1849 aa27■■□□□ 1.91
NDUFB1-201ENST00000329559 BAG6P46379 1132 aa27■■□□□ 1.91
NDUFB1-201ENST00000329559 COL3A1P02461 1466 aaPredicted RBP27■■□□□ 1.91
NDUFB1-201ENST00000329559 DIAPH1O60610 1272 aaKnown RBP26.99■■□□□ 1.91
NDUFB1-201ENST00000329559 APBA3O96018 575 aa26.99■■□□□ 1.91
NDUFB1-201ENST00000329559 AEBP1Q8IUX7 1158 aa26.99■■□□□ 1.91
NDUFB1-201ENST00000329559 EN1Q05925 392 aaPredicted RBP26.98■■□□□ 1.91
NDUFB1-201ENST00000329559 BCL11BQ9C0K0 894 aaPredicted RBP26.98■■□□□ 1.91
NDUFB1-201ENST00000329559 SULT6B1Q6IMI4 303 aa26.97■■□□□ 1.91
NDUFB1-201ENST00000329559 ACSBG1Q96GR2 724 aa26.97■■□□□ 1.91
NDUFB1-201ENST00000329559 KCNQ2O43526 872 aa26.96■■□□□ 1.91
NDUFB1-201ENST00000329559 PKD1L3Q7Z443 1732 aa26.96■■□□□ 1.91
NDUFB1-201ENST00000329559 PCDH11XQ9BZA7 1347 aa26.95■■□□□ 1.91
NDUFB1-201ENST00000329559 PCDH11YQ9BZA8 1340 aa26.95■■□□□ 1.91
NDUFB1-201ENST00000329559 CYP27B1O15528 508 aa26.95■■□□□ 1.9
NDUFB1-201ENST00000329559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.95■■□□□ 1.9
NDUFB1-201ENST00000329559 SPG7Q9UQ90 795 aa26.95■■□□□ 1.9
NDUFB1-201ENST00000329559 KDRP35968 1356 aa26.95■■□□□ 1.9
NDUFB1-201ENST00000329559 CFAP53Q96M91 514 aa26.93■■□□□ 1.9
NDUFB1-201ENST00000329559 CAMKK2Q96RR4 588 aa26.93■■□□□ 1.9
NDUFB1-201ENST00000329559 RALBP1Q15311 655 aa26.92■■□□□ 1.9
NDUFB1-201ENST00000329559 EZH2Q15910 746 aaKnown RBP26.92■■□□□ 1.9
NDUFB1-201ENST00000329559 PLEKHG2Q9H7P9 1386 aa26.92■■□□□ 1.9
NDUFB1-201ENST00000329559 NHSQ6T4R5 1651 aa26.91■■□□□ 1.9
NDUFB1-201ENST00000329559 HMOX1P09601 288 aa26.9■■□□□ 1.9
NDUFB1-201ENST00000329559 U2SURPO15042 1029 aaKnown RBP26.88■■□□□ 1.89
NDUFB1-201ENST00000329559 PLEKHO1Q53GL0 409 aaPredicted RBP26.88■■□□□ 1.89
NDUFB1-201ENST00000329559 PLSCR1O15162 318 aa26.87■■□□□ 1.89
NDUFB1-201ENST00000329559 PHKG2P15735 406 aa26.87■■□□□ 1.89
NDUFB1-201ENST00000329559 PRIM1P49642 420 aaKnown RBP26.87■■□□□ 1.89
NDUFB1-201ENST00000329559 NKX1-1Q15270 411 aaPredicted RBP26.87■■□□□ 1.89
NDUFB1-201ENST00000329559 AMOTQ4VCS5 1084 aa26.86■■□□□ 1.89
NDUFB1-201ENST00000329559 IFNL2Q8IZJ0 200 aa26.86■■□□□ 1.89
NDUFB1-201ENST00000329559 DOT1LQ8TEK3 1739 aa26.85■■□□□ 1.89
NDUFB1-201ENST00000329559 SYTL4Q96C24 671 aaPredicted RBP26.84■■□□□ 1.89
NDUFB1-201ENST00000329559 NUDCQ9Y266 331 aa26.83■■□□□ 1.89
NDUFB1-201ENST00000329559 KAT6BQ8WYB5 2073 aa26.83■■□□□ 1.89
NDUFB1-201ENST00000329559 ZNF530Q6P9A1 599 aaPredicted RBP26.82■■□□□ 1.88
NDUFB1-201ENST00000329559 BTAF1O14981 1849 aa26.81■■□□□ 1.88
NDUFB1-201ENST00000329559 PROM2Q8N271 834 aa26.81■■□□□ 1.88
NDUFB1-201ENST00000329559 PRKRIP1Q9H875 184 aaPredicted RBP26.81■■□□□ 1.88
NDUFB1-201ENST00000329559 MYBBP1AQ9BQG0 1328 aaKnown RBP26.81■■□□□ 1.88
NDUFB1-201ENST00000329559 TOGARAM1Q9Y4F4 1720 aa26.79■■□□□ 1.88
NDUFB1-201ENST00000329559 RGPD3A6NKT7 1758 aaPredicted RBP26.79■■□□□ 1.88
NDUFB1-201ENST00000329559 RGPD4Q7Z3J3 1758 aa26.79■■□□□ 1.88
NDUFB1-201ENST00000329559 RREB1Q92766 1687 aa26.79■■□□□ 1.88
NDUFB1-201ENST00000329559 U2AF1L5P0DN76 240 aaPredicted RBP26.77■■□□□ 1.88
NDUFB1-201ENST00000329559 U2AF1Q01081 240 aaKnown RBP eCLIP26.77■■□□□ 1.88
NDUFB1-201ENST00000329559 RSPH6AQ9H0K4 717 aa26.77■■□□□ 1.88
NDUFB1-201ENST00000329559 TXNRD1Q16881 649 aa26.76■■□□□ 1.87
NDUFB1-201ENST00000329559 MTHFSDQ2M296 383 aaKnown RBP26.76■■□□□ 1.87
NDUFB1-201ENST00000329559 MPRIPQ6WCQ1 1025 aa26.76■■□□□ 1.87
NDUFB1-201ENST00000329559 HSP90AB1P08238 724 aaKnown RBP26.75■■□□□ 1.87
NDUFB1-201ENST00000329559 C1orf141Q5JVX7 400 aa26.75■■□□□ 1.87
NDUFB1-201ENST00000329559 NUP188Q5SRE5 1749 aa26.74■■□□□ 1.87
NDUFB1-201ENST00000329559 DCAF5Q96JK2 942 aa26.74■■□□□ 1.87
NDUFB1-201ENST00000329559 PRKAR2BP31323 418 aa26.73■■□□□ 1.87
NDUFB1-201ENST00000329559 PIGBQ92521 554 aa26.73■■□□□ 1.87
NDUFB1-201ENST00000329559 KDM6AO15550 1401 aaPredicted RBP26.73■■□□□ 1.87
NDUFB1-201ENST00000329559 ITGB4P16144 1822 aa26.72■■□□□ 1.87
NDUFB1-201ENST00000329559 FCHSD2O94868 740 aa26.72■■□□□ 1.87
NDUFB1-201ENST00000329559 AKAP4Q5JQC9 854 aa26.72■■□□□ 1.87
NDUFB1-201ENST00000329559 PHACTR3Q96KR7 559 aa26.72■■□□□ 1.87
NDUFB1-201ENST00000329559 ERVV-2B6SEH9 535 aa26.7■■□□□ 1.86
NDUFB1-201ENST00000329559 TMOD3Q9NYL9 352 aa26.7■■□□□ 1.86
NDUFB1-201ENST00000329559 LRRC4BQ9NT99 713 aa26.68■■□□□ 1.86
NDUFB1-201ENST00000329559 NBPF14Q5TI25 921 aa26.67■■□□□ 1.86
NDUFB1-201ENST00000329559 PSDA5PKW4 1024 aaPredicted RBP26.66■■□□□ 1.86
NDUFB1-201ENST00000329559 R3HDM1Q15032 1099 aaKnown RBP26.66■■□□□ 1.86
NDUFB1-201ENST00000329559 GAS2L2Q8NHY3 880 aa26.66■■□□□ 1.86
NDUFB1-201ENST00000329559 LGR6Q9HBX8 967 aa26.66■■□□□ 1.86
NDUFB1-201ENST00000329559 CABP4P57796 275 aa26.65■■□□□ 1.86
NDUFB1-201ENST00000329559 SLC27A3Q5K4L6 730 aa26.65■■□□□ 1.86
NDUFB1-201ENST00000329559 ANO8Q9HCE9 1232 aaPredicted RBP26.65■■□□□ 1.86
NDUFB1-201ENST00000329559 PALLDQ8WX93 1383 aa26.64■■□□□ 1.86
NDUFB1-201ENST00000329559 RNMTO43148 476 aaKnown RBP26.64■■□□□ 1.86
NDUFB1-201ENST00000329559 LY75O60449 1722 aa26.64■■□□□ 1.85
NDUFB1-201ENST00000329559 KCNQ4P56696 695 aa26.63■■□□□ 1.85
NDUFB1-201ENST00000329559 SMARCC1Q92922 1105 aaPredicted RBP26.63■■□□□ 1.85
NDUFB1-201ENST00000329559 ASAP1Q9ULH1 1129 aa26.63■■□□□ 1.85
NDUFB1-201ENST00000329559 SCN11AQ9UI33 1791 aa26.62■■□□□ 1.85
NDUFB1-201ENST00000329559 NFATC2IPQ8NCF5 419 aa26.62■■□□□ 1.85
NDUFB1-201ENST00000329559 PLEKHF1Q96S99 279 aa26.62■■□□□ 1.85
NDUFB1-201ENST00000329559 ATG3Q9NT62 314 aa26.62■■□□□ 1.85
NDUFB1-201ENST00000329559 MAP3K5Q99683 1374 aa26.61■■□□□ 1.85
NDUFB1-201ENST00000329559 GNAT3A8MTJ3 354 aa26.61■■□□□ 1.85
NDUFB1-201ENST00000329559 CCNL1Q9UK58 526 aaPredicted RBP26.61■■□□□ 1.85
NDUFB1-201ENST00000329559 ADAMTS7Q9UKP4 1686 aa26.6■■□□□ 1.85
NDUFB1-201ENST00000329559 PAPPAQ13219 1627 aa26.59■■□□□ 1.85
NDUFB1-201ENST00000329559 ANP32CO43423 234 aa26.59■■□□□ 1.85
NDUFB1-201ENST00000329559 IL17REQ8NFR9 667 aa26.59■■□□□ 1.85
NDUFB1-201ENST00000329559 SLC52A2Q9HAB3 445 aa26.59■■□□□ 1.85
NDUFB1-201ENST00000329559 STK32BQ9NY57 414 aa26.58■■□□□ 1.85
NDUFB1-201ENST00000329559 SLC15A2Q16348 729 aa26.57■■□□□ 1.84
NDUFB1-201ENST00000329559 CCDC184Q52MB2 194 aa26.56■■□□□ 1.84
NDUFB1-201ENST00000329559 PNNQ9H307 717 aaKnown RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms